ClCG05G003720.1 (mRNA) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G003720.1
Type	mRNA
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	F-box domain containing protein
Location	CG_Chr05 : 3509403 .. 3513132 (-)
Sequence length	1304

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCAGATATTTTTGGAAGAAAACTGGCTATCGTTCTTCCAGTATAATTTACAACCGCCGTTCCCTCAGCAATCAATGTTAATCGCCGATCGTTTCATCCTCTTCAAAACCCTTCTCCCTCTATAAACCCCTATCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGGTCCGCATCGTCTCCCCATTAATCCGTTCTTGATGTGGTGTGCTTGTGGTTTAATTCGATTCTCTGGAATTGGATTTTGGTATTTCATTTTTTGATAGCATTAGAAATTGTTCGCCCAGTGTAAATGGAATCAAGTCACTCGTTTTTTGCGTTTAGAAGTTGGATTTGTTTGTTGTCGAATGGGGTTCTGGGATTCTGTGGCTTTCATTTCTGTTTTGTTTTATGTACTTGTCTTTCCCCCCCATCGGGATTTAATTGTTAAATTTATGTACTCTGTGGCTTTTTCTACGTCGATGGATCATAACAAACTGCAGTTAGTGGATTCGTAGTGTAATCTCTCTCACGTTAATTTCAATTATTTCTCCGCGTTATTGAAAATTTGTTTTTGACCCATTTCCTTGATTCTTTTTAAGAGTGAGTTTGGATGGCTTTTAGACGGTTAAAGTGCTTTAAGCCTATTAAACTTATCCAAATGCATTCATAGTTCTTTGGGTTGACAATAAAAAAATCCTAGATACGGAATCTTGACATCATGAAATCCTTTGGAGAAATACTTAGGTTATTGTATCCTATTTTCGCCCTTTTATTGATATGAAAGTGTGTTTGAAAGCTATATTCTAGATTATTTTCTAAAATTTTCGTCTTCTTTTAGGCCCTTAGAGAAAGTTTGGAATTTGAAAACGCATTTTAATTTATTTGCTTATCCGGAAGTATTAGATGTTATTGTGATATGATTACATACATAAATCAAGTTGAAGCCAAGAAATTCACATCCTTCTTACTAGGTAGCCCATCCCTGTGTATGCACCAGGGGATCGTTATGACTGCCTCTGCCTGTCACGTCTTATTAGACATTGGGATACATGATCTAAAATTTTACAAAATTGAAATTGTGTAGCGTCAAAAAGAATGAACATTCACTACTGTAAAATTGAACATTTGGTAAGCAAATTTCTTGTATTTTCTCTTAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAGTAAAGTCTCCTTTTCCACCTACAAGCAATAGTTGTGGGAGTGTGCTGTTAGCCTGTTACATATACATAATATTATAATATATGAATGTTGTTCAATTTATAGTTGTGTGACCACAGTTGGGATGACCAAGTGCATCTACTGAATCTCGTCATCAATAATTTAGAAAATGTTCTGCACATGTACTCTTAAGCATGGCATAGTAAGAACTGTGAAAGCTCTATTACTTTGATATTCTTTTTTATGGGTTTAACTTCTTGTATCAGACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGTATGCTTGTCTTTTATGCAGTTATCAAACACTTTTCTGGACGCTAACCATCATTAGATGACATGAAGCCTGGCTATCTTATAAGAGAAGATTATTTAAATTAACTGGATGAAATTCATTTACGTTTGTGTTCTATGATTAATTAAACCTGACTATTTTATTAACATATTCTACACATGACCACCTTCTACACCATACCTTAGGCAGGCATCATACGAAGATTCATGCTATCTACATCTAATTTTATCCTCGTCTTAGTTGCACACCAACTATATGGTTTCCATAAGAAATATTTGGAATTTAATGGAATGCCCAACTCACTTCGAGAGAGGTTAGATGGCAGATGATGGATGCTTTAGCAATATGAATTTCATGGATCATCCTCACAATTTATATAGCCATGTTAGTGATTGTGTTATAAAACATCTAACATGCACATAAGAACTTCCATACTACCAATTGGATTTGCAACTGTCTATGGAGGATGGATACTTCATTGTATATTATCTGTCAATTTTCAAATTTGTGTCGTGTCATGGCTTCTTTGTGGAATGTCTATACTGGTGCTCATAGTATTGATGGCCGATTGGCCGTACTAGTGATTGAGAGGGTATATCCCAAAAGGTGTCTACTACTTGAGCCTGAATACCTTTTGACAAGTACGTACAATTACTATTATTGTACTCTAGCTGTCTGCTGGTTTTAAACTAATCTGCCAATTTTATGCTTAGATGCAAATGTGATCTAAAGTTAATGTGCACCTCACCAAAATTTCCACGTCTAAATATTTAACACACCTTTCCTGAAGGGCGAAATTGATTAATCATAATGCCTGGTAAGTTAATTTCTGTTCCTTTCAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAACAGCAGCTGGTGGTAAAATTGCTTGTTTGCTCTTTCTTGAAGAGGCTTCTGCCACTTTGCTGTGTACATAATTTTGGGAGTATGGGAAAGGAGTTGGTGTTGGTTTTGGATCACAAGTTATTTTGGTCCTTTGCCTAAAAATGGGAGTAGAATTCGTATGCTTGTAGAATTTGTTTATTATTATTATTTTTTCCTTAGAGAAAATGTATTTAGTTGTTGCTTACTAGTAAGTAGTAGTAGGATTTGAAATTAATAAGTTGAGTTCATGTTTGATGAGTGAGCTTGTTTTTCTTAAGTTATATACTTGTTAACATCTTTTTTTTTTTTTTGTGAGAAAACAAAGAACATTAACAGAAGAGCAACAAAAGCTTATACTCCTCGACAAGCTGAATCAACGAATGCAATTACGAGCAAGACCAAGACCGTTTGCAACAAACAAGTCAAAACTCTTCCAGATACAACTCTGCTGCTAGATTGAAAATGATTGAAGTGAAGTGACTAATTTCATGCTAAACAAGTTTTCTGGCCTCTATTGTTATTCATACATAATTCTTAAGGCCTTTGTTCTGTACGTCAACTCAAACATGTCTCAAATATCATATTTTAGATTCAAGTTTATTGCTCCTATCTGCAACCTAATATTTATGTAGAAAAATAGAACTCCTAATATTTAGGTATATTGTATATTAACTACTAAGTTTTGCCAATCATGTACAAATATATATGGTACAAGTAATTGAAAA

mRNA sequence

CTTTTCAGATATTTTTGGAAGAAAACTGGCTATCGTTCTTCCAGTATAATTTACAACCGCCGTTCCCTCAGCAATCAATGTTAATCGCCGATCGTTTCATCCTCTTCAAAACCCTTCTCCCTCTATAAACCCCTATCGCCTCTTGAGCTTTGAATTTATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAACAGCAGCTGGTGAACATTAACAGAAGAGCAACAAAAGCTTATACTCCTCGACAAGCTGAATCAACGAATGCAATTACGAGCAAGACCAAGACCGTTTGCAACAAACAAGTCAAAACTCTTCCAGATACAACTCTGCTGCTAGATTGAAAATGATTGAAGTGAAGTGACTAATTTCATGCTAAACAAGTTTTCTGGCCTCTATTGTTATTCATACATAATTCTTAAGGCCTTTGTTCTGTACGTCAACTCAAACATGTCTCAAATATCATATTTTAGATTCAAGTTTATTGCTCCTATCTGCAACCTAATATTTATGTAGAAAAATAGAACTCCTAATATTTAGGTATATTGTATATTAACTACTAAGTTTTGCCAATCATGTACAAATATATATGGTACAAGTAATTGAAAA

Coding sequence (CDS)

ATGGCGCAAAGCGACTTCCTCGGCGAAAGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGAGAATGTCTCGGATGGACGAGGGCAACAAAATGGAACCCCAAATGTTCTTCTCCAAGATCCTTTCGTGGTGTTAGGTTCTGATCTATTAATGGCGATATTCAGCTACCTCGATGCACGCAGCGTGGCACTTTCTCTCCTTGTCTCTCGATCTTGGTACGCCGTAGCTTCCAGCGATCGCCTATGGAGTTCGAAGTGCATGGAACTGTGGCTCGGGAAAGCACATATCCCTAGATTGGCACAAAGCCGAGGTCTTCCAAAGCTGGCTGCTTATTCGCTATCTGTCATGGATGGCAAGCGAACTCGCATTTTGAGGGAGGATTTATGTGATCATGCCTGGCAATTTCACTTCAATAAGGAAGCTCCGGTCTACTGGCGAGATCTTGATCCGTATTGGCAAGGCAGCCACCCTCTCATGCGTCGTTATTTCCATCCTGATGGGAGCCAAACTGCAGATCCTGATGATAGAGTATGGGGTGGCCATGAAAGCTGCTTTTCCACAGTCACAAGTTTTGTTGGCGACGGGGAGATCAGAGAACACTATGTGAGGATAAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGCATAGCCGATGCTGAAAAGGCTGGCGGGACGGGTCCCCTTTAA

Protein sequence

MAQSDFLGERARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL

Homology

[Close]

BLAST of ClCG05G003720.1 vs. TrEMBL
Match: A0A0A0L471_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-129
Identity = 227/247 (91.90%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MAQSDFLGERARWKARKKK--RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLLMAIFSYL 60
           MAQSDFLG  ARWK+RKKK  RE VSD RGQQN  T N LLQDPF VLGSDLL+AI SYL
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120
           DARSVALSL VSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
           GKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 240
           WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 AGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]

BLAST of ClCG05G003720.1 vs. TrEMBL
Match: A0A061EM39_THECC (F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 166/239 (69.46%), Postives = 196/239 (82.01%), Query Frame = 1


Query: 8   GERARWKARKKKRENVSDGRGQQNGTPN--VLLQDPFVVLGSDLLMAIFSYLDARSVALS 67
           GER R K RK+  EN  + + Q+ G     V+ +DP  V G D+++ I S LDARSVALS
Sbjct: 16  GER-RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 75

Query: 68  LLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILR 127
           LLVSR+W+ VASSDRLWSSKC ELW GKAHIPR +Q+RGL KLAAYS+SVMDGKRTRI++
Sbjct: 76  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 135

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHE C+
Sbjct: 136 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 195

Query: 188 STVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           S VTS VG+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DA+K GGTGPL
Sbjct: 196 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]

BLAST of ClCG05G003720.1 vs. TrEMBL
Match: A0A067KNI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 7.3e-94
Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 1


Query: 12  RWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRS 71
           R + ++KK EN ++    +    + L QDP   LG D+++ I S LDARSVALSLLVSR 
Sbjct: 57  RRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSLLVSRG 116

Query: 72  WYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDH 131
           W+ +ASSDRLWSSKC ELWLGKAHIPRL+Q RG+ KLAAYSLSVMDGKRTRI+R+DLCDH
Sbjct: 117 WHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRDDLCDH 176

Query: 132 AWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSF 191
           AW+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQTADP DRVWGGHE CFS VTSF
Sbjct: 177 AWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFSVVTSF 236

Query: 192 VGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           + DG IREHYVRINRWPRM VSR +DWSW+MSNH   YSS+ DA K GGTGP+
Sbjct: 237 IADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

[Close]

BLAST of ClCG05G003720.1 vs. TrEMBL
Match: B9RWR4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.6e-93
Identity = 166/235 (70.64%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 10  RARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVS 69
           R  +K RK+K++  S+G   +        QDP  VLG DL+M I S LDARSVALSLLVS
Sbjct: 26  RDDFKERKRKKKKKSEGEDCER-------QDPLEVLGWDLMMKILSNLDARSVALSLLVS 85

Query: 70  RSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLC 129
           RSW  +A SDRLW+SKC ELWLGKAHIPRL+Q RGL KLAAYSLSVMD KRTRI+R+DLC
Sbjct: 86  RSWNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDDLC 145

Query: 130 DHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVT 189
           DH W+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQ+ADP DRVWGGHE CFS VT
Sbjct: 146 DHVWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSVVT 205

Query: 190 SFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           SF+GDG IREHYVRINRWPR+ VSR +DWSW+MSNH   YSSI DA K GGTGPL
Sbjct: 206 SFIGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

[Close]

BLAST of ClCG05G003720.1 vs. TrEMBL
Match: F6HS42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 157/230 (68.26%), Postives = 185/230 (80.43%), Query Frame = 1


Query: 14  KARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRSWY 73
           K ++K+++   +G+ +       +LQDP  V GSD++M I SYLDA SVALSLLVSR W+
Sbjct: 44  KKKRKRQDGAEEGKSE-------VLQDPLEVFGSDMMMMILSYLDAPSVALSLLVSRGWH 103

Query: 74  AVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDHAW 133
            VASSDRLWS+KC ELW GKAHIPR++Q RGL KLAAYS SVMDGKR+RI ++DLCDH W
Sbjct: 104 GVASSDRLWSTKCEELWCGKAHIPRVSQERGLSKLAAYSFSVMDGKRSRITKDDLCDHVW 163

Query: 134 QFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSFVG 193
            FHFN+ AP YWR+LDPYW+G+ P MRRYFHPDGSQTADP D+VWGGHE C+S VTSFVG
Sbjct: 164 NFHFNRGAPDYWRNLDPYWKGTGPPMRRYFHPDGSQTADPGDQVWGGHECCYSIVTSFVG 223

Query: 194 DGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGP 244
            G+IREHYVRINRWP+M V R  DWSW+MSNH   YSSI DA+K GGTGP
Sbjct: 224 GGKIREHYVRINRWPQMSVFRKPDWSWEMSNHLYCYSSIPDADKEGGTGP 266

[Close]

BLAST of ClCG05G003720.1 vs. NCBI nr
Match: gi|449432472|ref|XP_004134023.1| (PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus])

HSP 1 Score: 470.7 bits (1210), Expect = 1.6e-129
Identity = 227/247 (91.90%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MAQSDFLGERARWKARKKK--RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLLMAIFSYL 60
           MAQSDFLG  ARWK+RKKK  RE VSD RGQQN  T N LLQDPF VLGSDLL+AI SYL
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 61  DARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120
           DARSVALSL VSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 121 GKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRV 180
           GKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 240
           WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

Query: 241 AGGTGPL 245
            GGTGPL
Sbjct: 241 TGGTGPL 247

[Close]

BLAST of ClCG05G003720.1 vs. NCBI nr
Match: gi|659075958|ref|XP_008438422.1| (PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 6.5e-128
Identity = 225/254 (88.58%), Postives = 231/254 (90.94%), Query Frame = 1


Query: 1   MAQSDFLGERARWKARKKK---------RENVSDGRGQQNG-TPNVLLQDPFVVLGSDLL 60
           MAQSDFL   ARWK RKKK         RE VSD RGQQN  T N +LQDPF VLGSDLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 61  MAIFSYLDARSVALSLLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAA 120
           M I SYLDARSVALSLLVSRSWYAVASSDRLWSSKC+ELWLGKAHIPRLAQSRGLPKLAA
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 121 YSLSVMDGKRTRILREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180
           YSLS+MDGKRTRI+REDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYS 240
           ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

Query: 241 SIADAEKAGGTGPL 245
           SIAD +KAGGTGPL
Sbjct: 241 SIADPDKAGGTGPL 254

[Close]

BLAST of ClCG05G003720.1 vs. NCBI nr
Match: gi|590657285|ref|XP_007034521.1| (F-box family protein [Theobroma cacao])

HSP 1 Score: 356.7 bits (914), Expect = 3.3e-95
Identity = 166/239 (69.46%), Postives = 196/239 (82.01%), Query Frame = 1


Query: 8   GERARWKARKKKRENVSDGRGQQNGTPN--VLLQDPFVVLGSDLLMAIFSYLDARSVALS 67
           GER R K RK+  EN  + + Q+ G     V+ +DP  V G D+++ I S LDARSVALS
Sbjct: 16  GER-RLKKRKRNEENDPEDQKQEQGNEEEEVVARDPLEVFGRDIMVMILSNLDARSVALS 75

Query: 68  LLVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILR 127
           LLVSR+W+ VASSDRLWSSKC ELW GKAHIPR +Q+RGL KLAAYS+SVMDGKRTRI++
Sbjct: 76  LLVSRAWHGVASSDRLWSSKCEELWHGKAHIPRASQARGLSKLAAYSISVMDGKRTRIMK 135

Query: 128 EDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCF 187
           +DLCDH W+FHFNK AP YWR+LDPYW+G+ PLMRRYFHPDGSQTADP D+VWGGHE C+
Sbjct: 136 DDLCDHVWEFHFNKAAPEYWRNLDPYWKGTGPLMRRYFHPDGSQTADPGDKVWGGHECCY 195

Query: 188 STVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           S VTS VG+G+IR HYVRINRWPRMFVSRN+DWSW+MSN    Y+S+ DA+K GGTGPL
Sbjct: 196 SVVTSVVGEGKIRVHYVRINRWPRMFVSRNQDWSWEMSNCLYCYTSVPDADKKGGTGPL 253

[Close]

BLAST of ClCG05G003720.1 vs. NCBI nr
Match: gi|802633773|ref|XP_012077663.1| (PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas])

HSP 1 Score: 351.7 bits (901), Expect = 1.1e-93
Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 1


Query: 12  RWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVSRS 71
           R + ++KK EN ++    +    + L QDP   LG D+++ I S LDARSVALSLLVSR 
Sbjct: 57  RRRRKRKKTENGNEAAEVKCNEEDFLRQDPLEGLGWDIMLKILSNLDARSVALSLLVSRG 116

Query: 72  WYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLCDH 131
           W+ +ASSDRLWSSKC ELWLGKAHIPRL+Q RG+ KLAAYSLSVMDGKRTRI+R+DLCDH
Sbjct: 117 WHRLASSDRLWSSKCEELWLGKAHIPRLSQIRGISKLAAYSLSVMDGKRTRIMRDDLCDH 176

Query: 132 AWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVTSF 191
           AW+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQTADP DRVWGGHE CFS VTSF
Sbjct: 177 AWEFHFTKLAPEYWRNLDPYWKGTEPLMHRYFHQDGSQTADPGDRVWGGHECCFSVVTSF 236

Query: 192 VGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           + DG IREHYVRINRWPRM VSR +DWSW+MSNH   YSS+ DA K GGTGP+
Sbjct: 237 IADGTIREHYVRINRWPRMSVSRKQDWSWEMSNHLFCYSSVPDAYKKGGTGPV 289

[Close]

BLAST of ClCG05G003720.1 vs. NCBI nr
Match: gi|255554286|ref|XP_002518183.1| (PREDICTED: uncharacterized protein LOC8265676 [Ricinus communis])

HSP 1 Score: 349.4 bits (895), Expect = 5.2e-93
Identity = 166/235 (70.64%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 10  RARWKARKKKRENVSDGRGQQNGTPNVLLQDPFVVLGSDLLMAIFSYLDARSVALSLLVS 69
           R  +K RK+K++  S+G   +        QDP  VLG DL+M I S LDARSVALSLLVS
Sbjct: 26  RDDFKERKRKKKKKSEGEDCER-------QDPLEVLGWDLMMKILSNLDARSVALSLLVS 85

Query: 70  RSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKRTRILREDLC 129
           RSW  +A SDRLW+SKC ELWLGKAHIPRL+Q RGL KLAAYSLSVMD KRTRI+R+DLC
Sbjct: 86  RSWNLLACSDRLWTSKCEELWLGKAHIPRLSQVRGLSKLAAYSLSVMDAKRTRIMRDDLC 145

Query: 130 DHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGGHESCFSTVT 189
           DH W+FHF K AP YWR+LDPYW+G+ PLM RYFH DGSQ+ADP DRVWGGHE CFS VT
Sbjct: 146 DHVWEFHFTKVAPEYWRNLDPYWKGTGPLMHRYFHQDGSQSADPGDRVWGGHECCFSVVT 205

Query: 190 SFVGDGEIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGGTGPL 245
           SF+GDG IREHYVRINRWPR+ VSR +DWSW+MSNH   YSSI DA K GGTGPL
Sbjct: 206 SFIGDGTIREHYVRINRWPRLSVSRKQDWSWEMSNHLFCYSSIPDAYKEGGTGPL 253

The following BLAST results are available for this feature:

BLAST of ClCG05G003720.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L471_CUCSA	1.1e-129	91.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133360 PE=4 SV=1	[more]
A0A061EM39_THECC	2.3e-95	69.46	F-box family protein OS=Theobroma cacao GN=TCM_020443 PE=4 SV=1	[more]
A0A067KNI3_JATCU	7.3e-94	69.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12918 PE=4 SV=1	[more]
B9RWR4_RICCO	3.6e-93	70.64	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023650 PE=4 SV=1	[more]
F6HS42_VITVI	1.2e-91	68.26	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0051g00330 PE=4 SV=...	[more]

BLAST of ClCG05G003720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432472\|ref\|XP_004134023.1\|	1.6e-129	91.90	PREDICTED: uncharacterized protein LOC101220252 isoform X1 [Cucumis sativus]	[more]
gi\|659075958\|ref\|XP_008438422.1\|	6.5e-128	88.58	PREDICTED: uncharacterized protein LOC103483521 isoform X1 [Cucumis melo]	[more]
gi\|590657285\|ref\|XP_007034521.1\|	3.3e-95	69.46	F-box family protein [Theobroma cacao]	[more]
gi\|802633773\|ref\|XP_012077663.1\|	1.1e-93	69.96	PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas]	[more]
gi\|255554286\|ref\|XP_002518183.1\|	5.2e-93	70.64	PREDICTED: uncharacterized protein LOC8265676 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
ClCG05G003720	ClCG05G003720	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
ClCG05G003720.1	ClCG05G003720.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G003720.1.three_prime_UTR2	ClCG05G003720.1.three_prime_UTR2	three_prime_UTR
ClCG05G003720.1.three_prime_UTR1	ClCG05G003720.1.three_prime_UTR1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G003720.1.cds4	ClCG05G003720.1.cds4	CDS
ClCG05G003720.1.cds3	ClCG05G003720.1.cds3	CDS
ClCG05G003720.1.cds2	ClCG05G003720.1.cds2	CDS
ClCG05G003720.1.cds1	ClCG05G003720.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
ClCG05G003720.1.five_prime_UTR1	ClCG05G003720.1.five_prime_UTR1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 48..86 score: 4.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 35..93 score: 4.45
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 40..86 score: 2.6
None	No IPR available	PANTHER	PTHR22844	F-BOX AND WD40 DOMAIN PROTEIN	coord: 16..243 score: 2.1
None	No IPR available	PANTHER	PTHR22844:SF163	SUBFAMILY NOT NAMED	coord: 16..243 score: 2.1