ClCG01G015770 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G015770
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 30079747 .. 30080166 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAG

mRNA sequence

ATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAG

Coding sequence (CDS)

ATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAG

Protein sequence

MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININGRFSANTIVGCWTRRWWQ
Homology
[Close]
BLAST of ClCG01G015770 vs. TrEMBL
Match: A0A0A0KFU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-33
Identity = 88/115 (76.52%), Postives = 90/115 (78.26%), Query Frame = 1 

Query: 1   MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG- 60
           MEEESSSS NSEEVL AAQQLMQLSN DDNSSNV VVV     K N KK    D GGGG 
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSN-DDNSSNVDVVV--AEAKKNKKKDFGGDGGGGGG 60

Query: 61  --EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSII--SRPKKRRFRSIE 110
             EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS I  SRPKKRRFRSI+
Sbjct: 61  CREEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of ClCG01G015770 vs. TrEMBL
Match: M5WYT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb022962mg PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11
Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = 1 

Query: 11  SEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQI 70
           +E  L AAQQLMQLS++D+N           NN +++  K  K  G    EEVDQ R  I
Sbjct: 16  TESELAAAQQLMQLSDEDNN-----------NNSSSSSNKNTKHEG----EEVDQ-RPLI 75

Query: 71  ESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININGRFSANTIV 130
               W KIEEIFGK+++ D         RPKKRR+RS+ SIY+ +KP+N        ++ 
Sbjct: 76  NVITWAKIEEIFGKEEDVD---------RPKKRRYRSLASIYLTSKPVNAGSAHGKKSVT 114

Query: 131 GCWT 135
              T
Sbjct: 136 AMET 114

[Close]
BLAST of ClCG01G015770 vs. TrEMBL
Match: A0A067KGF9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-09
Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = 1 

Query: 1   MEEESSSSRNSEEVLD----AAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHG 60
           M+E  + +R  +   D    AAQQLMQLS++D+++SN         N+  +K   K    
Sbjct: 1   MQELQAMNRTQKFFTDMEMVAAQQLMQLSDEDNSNSNSI-------NEKKSKNMKKSGFD 60

Query: 61  GGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTK 120
           G  EEE D+   Q E +   KIEEIFGK++E+       I+ RP+K+R+RS+ESIY  TK
Sbjct: 61  GDIEEEFDRFISQDEITS-KKIEEIFGKEEEEKIS---IILGRPRKKRYRSLESIYKTTK 113

[Close]
BLAST of ClCG01G015770 vs. TrEMBL
Match: A0A0D2QFM1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G049200 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.1e-09
Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 1 

Query: 1   MEEESSSSR-------NSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKK---K 60
           +E E SS+        +  ++  AAQQLMQLS++D++SS+      + N  NNNKK   K
Sbjct: 2   LESEYSSAELQWTLLMSDSDMAAAAQQLMQLSDEDNSSSS-----SSSNGNNNNKKIIAK 61

Query: 61  MKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP-KKRRFRSIE 119
           M KD     E  ++Q + +I S+   KIEEIFGK++          ISRP KKRR+R +E
Sbjct: 62  MMKD-----ERYLEQIQNEITSA---KIEEIFGKEE----------ISRPTKKRRYRFLE 107

[Close]
BLAST of ClCG01G015770 vs. TrEMBL
Match: A5BQN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09
Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 1 

Query: 17  AAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWL 76
           AAQQLMQLS D+++               N+ K   K +  G EEE++Q + +I S+   
Sbjct: 3   AAQQLMQLSGDEED---------------NDCKSKNKGNPDGEEEELEQNQSEITSA--- 62

Query: 77  KIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPINI 121
           KIEEIFG+++E++  +   +  RP+KRR+RS+  IYM T+P+N+
Sbjct: 63  KIEEIFGREEEEE--EEKQL--RPRKRRYRSLVHIYMTTEPVNV 84

[Close]
BLAST of ClCG01G015770 vs. NCBI nr
Match: gi|700193194|gb|KGN48398.1| (hypothetical protein Csa_6G486710 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 88/115 (76.52%), Postives = 90/115 (78.26%), Query Frame = 1 

Query: 1   MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG- 60
           MEEESSSS NSEEVL AAQQLMQLSN DDNSSNV VVV     K N KK    D GGGG 
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSN-DDNSSNVDVVV--AEAKKNKKKDFGGDGGGGGG 60

Query: 61  --EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSII--SRPKKRRFRSIE 110
             EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS I  SRPKKRRFRSI+
Sbjct: 61  CREEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of ClCG01G015770 vs. NCBI nr
Match: gi|595886088|ref|XP_007213274.1| (hypothetical protein PRUPE_ppb022962mg [Prunus persica])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 50/124 (40.32%), Postives = 67/124 (54.03%), Query Frame = 1 

Query: 11  SEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQI 70
           +E  L AAQQLMQLS++D+N           NN +++  K  K  G    EEVDQ R  I
Sbjct: 16  TESELAAAQQLMQLSDEDNN-----------NNSSSSSNKNTKHEG----EEVDQ-RPLI 75

Query: 71  ESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININGRFSANTIV 130
               W KIEEIFGK+++ D         RPKKRR+RS+ SIY+ +KP+N        ++ 
Sbjct: 76  NVITWAKIEEIFGKEEDVD---------RPKKRRYRSLASIYLTSKPVNAGSAHGKKSVT 114

Query: 131 GCWT 135
              T
Sbjct: 136 AMET 114

[Close]
BLAST of ClCG01G015770 vs. NCBI nr
Match: gi|1000938983|ref|XP_015583458.1| (PREDICTED: uncharacterized protein LOC8273687 [Ricinus communis])

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-11
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 1 

Query: 17  AAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQK-RCQIESSVW 76
           AAQQLMQLS D+DNSS++      KN+ N N+K + +D      EE+D++ + +I S   
Sbjct: 23  AAQQLMQLS-DEDNSSSI-----NKNSSNRNRKNIYED------EELDRRSQDEITSK-- 82

Query: 77  LKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPININ 122
            KIEEIFGKD+E +         RPKK+RFRSI+SIY  TKPIN++
Sbjct: 83  -KIEEIFGKDEELEQ-------ERPKKKRFRSIKSIYKATKPINLD 106

[Close]
BLAST of ClCG01G015770 vs. NCBI nr
Match: gi|645218740|ref|XP_008232192.1| (PREDICTED: uncharacterized protein LOC103331352 [Prunus mume])

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-11
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 1 

Query: 11  SEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQI 70
           +E  L AAQQLMQLS++D+N           NN +++       H G   EEVDQ R  I
Sbjct: 26  TESELAAAQQLMQLSDEDNN-----------NNSSSSSSNKNTKHEG---EEVDQ-RPLI 85

Query: 71  ESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIESIYMNTKPIN 120
              +W K+EEIFGK+++ D         RPKKRR+RS+ SIY+ +KP+N
Sbjct: 86  NVIIWAKMEEIFGKEEDVD---------RPKKRRYRSLASIYLTSKPVN 110

[Close]
BLAST of ClCG01G015770 vs. NCBI nr
Match: gi|823140154|ref|XP_012469940.1| (PREDICTED: uncharacterized protein LOC105787889 [Gossypium raimondii])

HSP 1 Score: 72.0 bits (175), Expect = 9.2e-10
Identity = 56/141 (39.72%), Postives = 83/141 (58.87%), Query Frame = 1 

Query: 1   MEEESSSSR-------NSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKK---K 60
           +E E SS+        +  ++  AAQQLMQLS++D++SS+      + N  NNNKK   K
Sbjct: 2   LESEYSSAELQWTLLMSDSDMAAAAQQLMQLSDEDNSSSS-----SSSNGNNNNKKIIAK 61

Query: 61  MKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP-KKRRFRSIE 120
           M KD     E  ++Q + +I S+   KIEEIFGK++          ISRP KKRR+R +E
Sbjct: 62  MMKD-----ERYLEQIQNEITSA---KIEEIFGKEE----------ISRPTKKRRYRFLE 119

Query: 121 SIYMNTKPININ-GRFSANTI 130
           SIY  TKP+ ++ G+ + N++
Sbjct: 122 SIYKETKPMKVSYGKGNGNSL 119

The following BLAST results are available for this feature:
BLAST of ClCG01G015770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFU1_CUCSA9.1e-3376.52Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1[more]
M5WYT3_PRUPE1.2e-1140.32Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb022962mg PE=4 SV=1[more]
A0A067KGF9_JATCU1.1e-0939.52Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1[more]
A0A0D2QFM1_GOSRA4.1e-0941.86Uncharacterized protein OS=Gossypium raimondii GN=B456_003G049200 PE=4 SV=1[more]
A5BQN3_VITVI9.2e-0939.42Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1[more]
BLAST of ClCG01G015770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193194|gb|KGN48398.1|1.3e-3276.52hypothetical protein Csa_6G486710 [Cucumis sativus][more]
gi|595886088|ref|XP_007213274.1|1.7e-1140.32hypothetical protein PRUPE_ppb022962mg [Prunus persica][more]
gi|1000938983|ref|XP_015583458.1|2.8e-1149.06PREDICTED: uncharacterized protein LOC8273687 [Ricinus communis][more]
gi|645218740|ref|XP_008232192.1|3.7e-1143.12PREDICTED: uncharacterized protein LOC103331352 [Prunus mume][more]
gi|823140154|ref|XP_012469940.1|9.2e-1039.72PREDICTED: uncharacterized protein LOC105787889 [Gossypium raimondii][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G015770.1ClCG01G015770.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G015770Csa6G486710Cucumber (Chinese Long) v2cuwcgB432
ClCG01G015770MELO3C008021Melon (DHL92) v3.5.1mewcgB516
ClCG01G015770Cla008466Watermelon (97103) v1wcgwmB153
ClCG01G015770Cla97C01G014720Watermelon (97103) v2wcgwmbB089
ClCG01G015770Bhi03G001081Wax gourdwcgwgoB225
ClCG01G015770CSPI06G26890Wild cucumber (PI 183967)cpiwcgB453
ClCG01G015770CmaCh03G010660Cucurbita maxima (Rimu)cmawcgB579
ClCG01G015770CmaCh07G007770Cucurbita maxima (Rimu)cmawcgB754
ClCG01G015770CmoCh07G008010Cucurbita moschata (Rifu)cmowcgB755
ClCG01G015770Lsi01G011190Bottle gourd (USVL1VR-Ls)lsiwcgB127
ClCG01G015770Cp4.1LG10g03360Cucurbita pepo (Zucchini)cpewcgB061
ClCG01G015770Cp4.1LG19g12180Cucurbita pepo (Zucchini)cpewcgB425
ClCG01G015770MELO3C008021.2Melon (DHL92) v3.6.1medwcgB511
ClCG01G015770Carg10561Silver-seed gourdcarwcgB0230
ClCG01G015770CsaV3_6G042040Cucumber (Chinese Long) v3cucwcgB455
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G015770Watermelon (97103) v2wcgwmbB100
ClCG01G015770Wax gourdwcgwgoB222
ClCG01G015770Watermelon (Charleston Gray)wcgwcgB087
ClCG01G015770Cucumber (Gy14) v1cgywcgB134
ClCG01G015770Cucumber (Gy14) v1cgywcgB439
ClCG01G015770Cucurbita maxima (Rimu)cmawcgB521
ClCG01G015770Cucurbita moschata (Rifu)cmowcgB519
ClCG01G015770Cucurbita moschata (Rifu)cmowcgB575
ClCG01G015770Wild cucumber (PI 183967)cpiwcgB123
ClCG01G015770Cucumber (Chinese Long) v2cuwcgB116
ClCG01G015770Watermelon (97103) v1wcgwmB166
ClCG01G015770Cucurbita pepo (Zucchini)cpewcgB643
ClCG01G015770Cucumber (Gy14) v2cgybwcgB113
ClCG01G015770Cucumber (Gy14) v2cgybwcgB399
ClCG01G015770Silver-seed gourdcarwcgB0778