MELO3C008021.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C008021.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr08 : 6818383 .. 6818839 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGGTTGTTGTGATCATCATCATTCTTCTATTATTAACTCTCGTCCTAAGAAGAGACGATTTCGATCCATTCAAAGTATATATATGAAGACTAAACCTATGATCACTAATGGTAGATTCTCTACTAAGACGATGGTCGGGAATTGATCAACGTACGTACGCGGTGGCAGTGACCGTGGCGACGGTGGTAGGTTCGACTAATTTGGAGTTTCTTTGA

mRNA sequence

ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGATTCTCTACTAAGACGATGGTCGGGAATTGATCAACGTACGTACGCGGTGGCAGTGACCGTGGCGACGGTGGTAGGTTCGACTAATTTGGAGTTTCTTTGA

Coding sequence (CDS)

ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGTTAAGCAACGACGACAATAGTAGCAATGTCGATGTAGTCGTTGCGGCGAAGAAGAACAAGAAGAAGGATTGTTGTGGTGGTGGCGGTCGAGAGGAAGAGGTTGATCAAAAGAGATGTCAAATAGAATCGTCGATTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGAAGGAGATTCTCTACTAAGACGATGGTCGGGAATTGATCAACGTACGTACGCGGTGGCAGTGACCGTGGCGACGGTGGTAGGTTCGACTAATTTGGAGTTTCTTTGA

Protein sequence

MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNKKKDCCGGGGREEEVDQKRCQIESSIWLKIEEIFGKDEGDSLLRRWSGIDQRTYAVAVTVATVVGSTNLEFL
Homology
[Close]
BLAST of MELO3C008021.2 vs. NCBI nr
Match: KGN48398.1 (hypothetical protein Csa_6G486710 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 5.4e-04
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 0 

Query: 58 DQKRCQIESSIWLKIEEIFGKD-EGDSLLRRWSGI 92
          DQKRCQIESS+WLKIEEIFGKD EGD      S I
Sbjct: 64 DQKRCQIESSVWLKIEEIFGKDNEGDHCCHXXSSI 98

[Close]
BLAST of MELO3C008021.2 vs. TrEMBL
Match: tr|A0A0A0KFU1|A0A0A0KFU1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 0 

Query: 58 DQKRCQIESSIWLKIEEIFGKD-EGDSLLRRWSGI 92
          DQKRCQIESS+WLKIEEIFGKD EGD      S I
Sbjct: 64 DQKRCQIESSVWLKIEEIFGKDNEGDHCCHXXSSI 98

The following BLAST results are available for this feature:
BLAST of MELO3C008021.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48398.15.4e-0474.29hypothetical protein Csa_6G486710 [Cucumis sativus][more]
BLAST of MELO3C008021.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C008021.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C008021.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFU1|A0A0A0KFU1_CUCSA3.6e-0474.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C008021.2.1MELO3C008021.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C008021.2Lsi01G011190Bottle gourd (USVL1VR-Ls)lsimedB157
MELO3C008021.2Cla008466Watermelon (97103) v1medwmB560
MELO3C008021.2ClCG01G015770Watermelon (Charleston Gray)medwcgB511
MELO3C008021.2Cla97C01G014720Watermelon (97103) v2medwmbB508
MELO3C008021.2CsaV3_6G042040Cucumber (Chinese Long) v3cucmedB509
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C008021.2Wax gourdmedwgoB661
MELO3C008021.2Cucurbita maxima (Rimu)cmamedB696
MELO3C008021.2Cucumber (Gy14) v2cgybmedB443
MELO3C008021.2Cucumber (Gy14) v1cgymedB132
MELO3C008021.2Cucurbita maxima (Rimu)cmamedB901
MELO3C008021.2Cucurbita moschata (Rifu)cmomedB688
MELO3C008021.2Cucurbita moschata (Rifu)cmomedB890
MELO3C008021.2Cucurbita pepo (Zucchini)cpemedB092
MELO3C008021.2Cucurbita pepo (Zucchini)cpemedB544
MELO3C008021.2Wild cucumber (PI 183967)cpimedB145
MELO3C008021.2Wild cucumber (PI 183967)cpimedB497
MELO3C008021.2Cucumber (Chinese Long) v2cumedB144
MELO3C008021.2Cucumber (Chinese Long) v2cumedB487
MELO3C008021.2Silver-seed gourdcarmedB0251
MELO3C008021.2Silver-seed gourdcarmedB0817