Cp4.1LG10g03360 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g03360
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG10 : 2122441 .. 2122836 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTGTTGATGCAGCTGAGCATCGAGGATGAGGACGACGACGAAAACTGTAGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGACACGGCGGCGACCGCGGTGGCGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAAATTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTGGATTCCATTTTTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCAACACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCTAA

mRNA sequence

ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTGTTGATGCAGCTGAGCATCGAGGATGAGGACGACGACGAAAACTGTAGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGACACGGCGGCGACCGCGGTGGCGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAAATTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTGGATTCCATTTTTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCAACACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCTAA

Coding sequence (CDS)

ATGGGAGAAGACTCGTCGGAGGAGGTACTGGTTGCGGCGCAGCTGTTGATGCAGCTGAGCATCGAGGATGAGGACGACGACGAAAACTGTAGTAGCAATGTCGTTGTGGCGGCGGAGAACAAGAAGAACAAGAAGCTGAAAAAGGGACACGGCGGCGACCGCGGTGGCGGTGGGGAGGAGGAGGAGGTTGATCAGAAGAGATACCAAATTGAGACGTCAAATTGGTTGAAAATCGAAGAGATTTTCGGGAAAGATGATGAAGAAGAAGATTTGGATTCCATTTTTCGGCCTAAGAAGAGACGATTTCGATCCCTCCAAAGCATATATATCAACACCAAACCCATCGGTAATGGTAGATTCCCGGCAAGGGGATCGTCAGAACTTGAACACGGCTAA

Protein sequence

MGEDSSEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQKRYQIETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNGRFPARGSSELEHG
Homology
[Close]
BLAST of Cp4.1LG10g03360 vs. TrEMBL
Match: A0A0A0KFU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 69/110 (62.73%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 5   SSEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGG--EEEE 64
           +SEEVL AAQ LMQLS     +D+N S+  VV AE KKNKK  K  GGD GGGG   EEE
Sbjct: 10  NSEEVLGAAQQLMQLS-----NDDNSSNVDVVVAEAKKNKK--KDFGGDGGGGGGCREEE 69

Query: 65  VDQKRYQIETSNWLKIEEIFGKDDEEEDL----DSIF--RPKKRRFRSLQ 107
           VDQKR QIE+S WLKIEEIFGKD+E +       SI   RPKKRRFRS+Q
Sbjct: 70  VDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of Cp4.1LG10g03360 vs. TrEMBL
Match: M5WYT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb022962mg PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-09
Identity = 55/113 (48.67%), Postives = 65/113 (57.52%), Query Frame = 1 

Query: 6   SEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQ 65
           +E  L AAQ LMQLS ED +++ + SSN        KN K    H G        EEVDQ
Sbjct: 16  TESELAAAQQLMQLSDEDNNNNSSSSSN--------KNTK----HEG--------EEVDQ 75

Query: 66  KRYQIETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNG 119
            R  I    W KIEEIFGK   EED+D   RPKKRR+RSL SIY+ +KP+  G
Sbjct: 76  -RPLINVITWAKIEEIFGK---EEDVD---RPKKRRYRSLASIYLTSKPVNAG 101

[Close]
BLAST of Cp4.1LG10g03360 vs. TrEMBL
Match: A0A067KGF9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-07
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 1 

Query: 10  LVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQKRYQ 69
           +VAAQ LMQLS     D++N +SN +     KK+K +KK  G D   G  EEE D+   Q
Sbjct: 19  MVAAQQLMQLS-----DEDNSNSNSI---NEKKSKNMKKS-GFD---GDIEEEFDRFISQ 78

Query: 70  IETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNG 119
            E ++  KIEEIFGK++EE+    + RP+K+R+RSL+SIY  TK I  G
Sbjct: 79  DEITS-KKIEEIFGKEEEEKISIILGRPRKKRYRSLESIYKTTKQIKVG 114

[Close]
BLAST of Cp4.1LG10g03360 vs. TrEMBL
Match: A5BQN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-07
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1 

Query: 10  LVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQKRYQ 69
           + AAQ LMQLS ++ED+D  C S      +NK N              GEEEE++Q + +
Sbjct: 1   MAAAQQLMQLSGDEEDND--CKS------KNKGNPD------------GEEEELEQNQSE 60

Query: 70  IETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPI 116
           I ++   KIEEIFG+++EEE+ +   RP+KRR+RSL  IY+ T+P+
Sbjct: 61  ITSA---KIEEIFGREEEEEE-EKQLRPRKRRYRSLVHIYMTTEPV 82

[Close]
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match: gi|700193194|gb|KGN48398.1| (hypothetical protein Csa_6G486710 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-17
Identity = 69/110 (62.73%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 5   SSEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGG--EEEE 64
           +SEEVL AAQ LMQLS     +D+N S+  VV AE KKNKK  K  GGD GGGG   EEE
Sbjct: 10  NSEEVLGAAQQLMQLS-----NDDNSSNVDVVVAEAKKNKK--KDFGGDGGGGGGCREEE 69

Query: 65  VDQKRYQIETSNWLKIEEIFGKDDEEEDL----DSIF--RPKKRRFRSLQ 107
           VDQKR QIE+S WLKIEEIFGKD+E +       SI   RPKKRRFRS+Q
Sbjct: 70  VDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match: gi|595886088|ref|XP_007213274.1| (hypothetical protein PRUPE_ppb022962mg [Prunus persica])

HSP 1 Score: 70.1 bits (170), Expect = 3.3e-09
Identity = 55/113 (48.67%), Postives = 65/113 (57.52%), Query Frame = 1 

Query: 6   SEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQ 65
           +E  L AAQ LMQLS ED +++ + SSN        KN K    H G        EEVDQ
Sbjct: 16  TESELAAAQQLMQLSDEDNNNNSSSSSN--------KNTK----HEG--------EEVDQ 75

Query: 66  KRYQIETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNG 119
            R  I    W KIEEIFGK   EED+D   RPKKRR+RSL SIY+ +KP+  G
Sbjct: 76  -RPLINVITWAKIEEIFGK---EEDVD---RPKKRRYRSLASIYLTSKPVNAG 101

[Close]
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match: gi|645218740|ref|XP_008232192.1| (PREDICTED: uncharacterized protein LOC103331352 [Prunus mume])

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08
Identity = 54/113 (47.79%), Postives = 65/113 (57.52%), Query Frame = 1 

Query: 6   SEEVLVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQ 65
           +E  L AAQ LMQLS  DED++ N SS+    + NK  K              E EEVDQ
Sbjct: 26  TESELAAAQQLMQLS--DEDNNNNSSSS----SSNKNTKH-------------EGEEVDQ 85

Query: 66  KRYQIETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNG 119
            R  I    W K+EEIFGK   EED+D   RPKKRR+RSL SIY+ +KP+  G
Sbjct: 86  -RPLINVIIWAKMEEIFGK---EEDVD---RPKKRRYRSLASIYLTSKPVNAG 112

[Close]
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match: gi|802615673|ref|XP_012075291.1| (PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas])

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 1 

Query: 10  LVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQKRYQ 69
           +VAAQ LMQLS     D++N +SN +     KK+K +KK  G D   G  EEE D+   Q
Sbjct: 19  MVAAQQLMQLS-----DEDNSNSNSI---NEKKSKNMKKS-GFD---GDIEEEFDRFISQ 78

Query: 70  IETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPIGNG 119
            E ++  KIEEIFGK++EE+    + RP+K+R+RSL+SIY  TK I  G
Sbjct: 79  DEITS-KKIEEIFGKEEEEKISIILGRPRKKRYRSLESIYKTTKQIKVG 114

[Close]
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match: gi|147821799|emb|CAN72602.1| (hypothetical protein VITISV_012985 [Vitis vinifera])

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-07
Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1 

Query: 10  LVAAQLLMQLSIEDEDDDENCSSNVVVAAENKKNKKLKKGHGGDRGGGGEEEEVDQKRYQ 69
           + AAQ LMQLS ++ED+D  C S      +NK N              GEEEE++Q + +
Sbjct: 1   MAAAQQLMQLSGDEEDND--CKS------KNKGNPD------------GEEEELEQNQSE 60

Query: 70  IETSNWLKIEEIFGKDDEEEDLDSIFRPKKRRFRSLQSIYINTKPI 116
           I ++   KIEEIFG+++EEE+ +   RP+KRR+RSL  IY+ T+P+
Sbjct: 61  ITSA---KIEEIFGREEEEEE-EKQLRPRKRRYRSLVHIYMTTEPV 82

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g03360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g03360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFU1_CUCSA2.3e-1762.73Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1[more]
M5WYT3_PRUPE2.3e-0948.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb022962mg PE=4 SV=1[more]
A0A067KGF9_JATCU2.1e-0746.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1[more]
A5BQN3_VITVI2.8e-0742.45Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1[more]
BLAST of Cp4.1LG10g03360 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g03360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193194|gb|KGN48398.1|3.3e-1762.73hypothetical protein Csa_6G486710 [Cucumis sativus][more]
gi|595886088|ref|XP_007213274.1|3.3e-0948.67hypothetical protein PRUPE_ppb022962mg [Prunus persica][more]
gi|645218740|ref|XP_008232192.1|2.1e-0847.79PREDICTED: uncharacterized protein LOC103331352 [Prunus mume][more]
gi|802615673|ref|XP_012075291.1|3.1e-0746.79PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas][more]
gi|147821799|emb|CAN72602.1|4.0e-0742.45hypothetical protein VITISV_012985 [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g03360.1Cp4.1LG10g03360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g03360CmaCh07G007770Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g03360CmaCh03G010660Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g03360CmoCh07G008010Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g03360Cla008466Watermelon (97103) v1cpewmB075
Cp4.1LG10g03360Csa6G486710Cucumber (Chinese Long) v2cpecuB085
Cp4.1LG10g03360ClCG01G015770Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g03360CSPI06G26890Wild cucumber (PI 183967)cpecpiB080
Cp4.1LG10g03360Lsi01G011190Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g03360CsaV3_6G042040Cucumber (Chinese Long) v3cpecucB0092
Cp4.1LG10g03360Bhi03G001081Wax gourdcpewgoB0087
Cp4.1LG10g03360Carg10561Silver-seed gourdcarcpeB0337
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g03360Cp4.1LG19g12180Cucurbita pepo (Zucchini)cpecpeB076
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g03360Cucurbita pepo (Zucchini)cpecpeB068
Cp4.1LG10g03360Cucurbita pepo (Zucchini)cpecpeB098
Cp4.1LG10g03360Cucumber (Gy14) v1cgycpeB0211
Cp4.1LG10g03360Cucumber (Gy14) v1cgycpeB0663
Cp4.1LG10g03360Cucurbita maxima (Rimu)cmacpeB599
Cp4.1LG10g03360Cucurbita moschata (Rifu)cmocpeB547
Cp4.1LG10g03360Cucurbita moschata (Rifu)cmocpeB548
Cp4.1LG10g03360Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g03360Wild cucumber (PI 183967)cpecpiB057
Cp4.1LG10g03360Watermelon (Charleston Gray)cpewcgB066
Cp4.1LG10g03360Watermelon (97103) v1cpewmB093
Cp4.1LG10g03360Melon (DHL92) v3.5.1cpemeB069
Cp4.1LG10g03360Cucumber (Gy14) v2cgybcpeB156
Cp4.1LG10g03360Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g03360Melon (DHL92) v3.6.1cpemedB092
Cp4.1LG10g03360Silver-seed gourdcarcpeB1128
Cp4.1LG10g03360Silver-seed gourdcarcpeB1470
Cp4.1LG10g03360Silver-seed gourdcarcpeB1471
Cp4.1LG10g03360Wax gourdcpewgoB0083