CmoCh07G008010 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G008010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr07 : 3681543 .. 3682121 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGTAAGGGGATTGTCCAAACTTGATTACGAGGTTACTGGGTTTATCTTATATTAAATATATGACTTTTTTTTTAACAACAACTTTTAAGGTTTTATGTTCAGATTTGAATATCTCACCTCAAATTTCCATATCTCACCTCAAATTTTTAATTCAATTCTAGATACGAAAATAACTTTTAAGGTTTTATATTTAAATAAGGCGAGAATTGA

mRNA sequence

ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGCGAGAATTGA

Coding sequence (CDS)

ATGGAGGAAGAATCATCGTCGTGTTCGAGAAACTCAGAGGAGGTGTTGGATGCGGCGCAGCAGTTGGTACAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTTACGGCGGAGAACAAAAAGAAGAAGAAGATGATGAAGAAGAAGGAAGACGGCGGCGGTGACGGCGGAGAGGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACTTCCATTTGTTGGAAAATTGAAGAGATTTTTGGGAAGGATGATGATGATGATGAAGAAGGTTGTGGGTCAATTTCTCGGCCCAATAAGCGACGGTTTCGATCCATTCAAAGTATCTATATGAACACCAAACCTTTGGTTAATGCTAGATTCTCCGGCGAGAATTGA
Homology
[Close]
BLAST of CmoCh07G008010 vs. TrEMBL
Match: A0A0A0KFU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.6e-20
Identity = 74/113 (65.49%), Postives = 84/113 (74.34%), Query Frame = 1 

Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS S NSEEVL AAQQL+QLSN+D+SS+ +VV AE KK KK     + GGG G  
Sbjct: 1   MEEESSS-SPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDDDDE--EGCGSI--SRPNKRRFRSIQ 109
           EEEVDQKRCQIE+S+  KIEEIFGKD++ D       SI  SRP KRRFRSIQ
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of CmoCh07G008010 vs. TrEMBL
Match: A0A067KGF9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.3e-09
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 18  AAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWK 77
           AAQQL+QLS+ED+S+SN +   N+KK K MKK    G DG  EEE D+   Q E +   K
Sbjct: 21  AAQQLMQLSDEDNSNSNSI---NEKKSKNMKK---SGFDGDIEEEFDRFISQDEIT-SKK 80

Query: 78  IEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPL 118
           IEEIFGK  +++E+    + RP K+R+RS++SIY  TK +
Sbjct: 81  IEEIFGK--EEEEKISIILGRPRKKRYRSLESIYKTTKQI 111

[Close]
BLAST of CmoCh07G008010 vs. TrEMBL
Match: A5BQN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-06
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1 

Query: 18  AAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWK 77
           AAQQL+QLS +++ +               K K  G  DG EEEE++Q + +I ++   K
Sbjct: 3   AAQQLMQLSGDEEDND-------------CKSKNKGNPDG-EEEELEQNQSEITSA---K 62

Query: 78  IEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPL 118
           IEEIFG++++++EE      RP KRR+RS+  IYM T+P+
Sbjct: 63  IEEIFGREEEEEEE---KQLRPRKRRYRSLVHIYMTTEPV 82

[Close]
BLAST of CmoCh07G008010 vs. NCBI nr
Match: gi|700193194|gb|KGN48398.1| (hypothetical protein Csa_6G486710 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-20
Identity = 74/113 (65.49%), Postives = 84/113 (74.34%), Query Frame = 1 

Query: 1   MEEESSSCSRNSEEVLDAAQQLVQLSNEDDSSS-NVVTAENKKKKKMMKKKEDGGGDGGE 60
           MEEESSS S NSEEVL AAQQL+QLSN+D+SS+ +VV AE KK KK     + GGG G  
Sbjct: 1   MEEESSS-SPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAKKNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSICWKIEEIFGKDDDDDE--EGCGSI--SRPNKRRFRSIQ 109
           EEEVDQKRCQIE+S+  KIEEIFGKD++ D       SI  SRP KRRFRSIQ
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEGDHCCHHHSSIINSRPKKRRFRSIQ 112

[Close]
BLAST of CmoCh07G008010 vs. NCBI nr
Match: gi|802615673|ref|XP_012075291.1| (PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 

Query: 18  AAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWK 77
           AAQQL+QLS+ED+S+SN +   N+KK K MKK    G DG  EEE D+   Q E +   K
Sbjct: 21  AAQQLMQLSDEDNSNSNSI---NEKKSKNMKK---SGFDGDIEEEFDRFISQDEIT-SKK 80

Query: 78  IEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPL 118
           IEEIFGK  +++E+    + RP K+R+RS++SIY  TK +
Sbjct: 81  IEEIFGK--EEEEKISIILGRPRKKRYRSLESIYKTTKQI 111

[Close]
BLAST of CmoCh07G008010 vs. NCBI nr
Match: gi|1000938983|ref|XP_015583458.1| (PREDICTED: uncharacterized protein LOC8273687 [Ricinus communis])

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1 

Query: 18  AAQQLVQLSNEDDSSSNVVTAENKKKKKMMKKKEDGGGDGGEEEEVDQKRCQIETSICWK 77
           AAQQL+QLS+ED+SSS    + N+ +K +            E+EE+D++     TS   K
Sbjct: 23  AAQQLMQLSDEDNSSSINKNSSNRNRKNIY-----------EDEELDRRSQDEITS--KK 82

Query: 78  IEEIFGKDDDDDEEGCGSISRPNKRRFRSIQSIYMNTKPL 118
           IEEIFGKD++ ++E      RP K+RFRSI+SIY  TKP+
Sbjct: 83  IEEIFGKDEELEQE------RPKKKRFRSIKSIYKATKPI 103

The following BLAST results are available for this feature:
BLAST of CmoCh07G008010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh07G008010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFU1_CUCSA3.6e-2065.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486710 PE=4 SV=1[more]
A0A067KGF9_JATCU8.3e-0949.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09460 PE=4 SV=1[more]
A5BQN3_VITVI8.6e-0640.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012985 PE=4 SV=1[more]
BLAST of CmoCh07G008010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh07G008010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193194|gb|KGN48398.1|5.2e-2065.49hypothetical protein Csa_6G486710 [Cucumis sativus][more]
gi|802615673|ref|XP_012075291.1|1.2e-0849.00PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas][more]
gi|1000938983|ref|XP_015583458.1|3.0e-0745.00PREDICTED: uncharacterized protein LOC8273687 [Ricinus communis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh07G008010.1CmoCh07G008010.1mRNA