Carg16322 (gene) Silver-seed gourd

NameCarg16322
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_088 : 261230 .. 261652 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTAAACCGATACTCTTACTTTTTCCCTTTCTTACTTCCGGCGCACTTTCTTTGATTTCTAAGGTTCAAATCGAATGGATCTTGCTGTTTTCTTCCACAAAATCGATTTAATCTTTGTTTTCGTTTCGATTTGACCGATTTTGGCTGCGATTCTGTGAATTTCAACGATTTTAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCATATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

mRNA sequence

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCATATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCATATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

Protein sequence

MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGW
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16322-RACarg16322-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00239RHODOPSNTAILcoord: 15..26
score: 94.44
coord: 45..57
score: 44.87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..61
NoneNo IPR availablePANTHERPTHR31568:SF3CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-RELATEDcoord: 1..80
NoneNo IPR availablePANTHERPTHR31568FAMILY NOT NAMEDcoord: 1..80