CmaCh11G016960 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G016960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr11 : 11198928 .. 11200618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAATAAAAAATCCGGACCCAAATTAATTCTTTATTCAAATAGTTTTCATAGTTATAGCTCTCTGGTTTCTCTGTTTGGCTACTAATAAAATCCATCCGATCGCTCAAGAAATCTCCGAGAGAAAGAAGCGGAAGAAAATGAGTTACTACAACCAGCCTCCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTAAACCAATGCTCTTAGTTCTGATGCTTTTTCTTGAATTCCTAAGGTTCAAATCGAACGGATCGTGCTGTATTTAAGTAAAAAACGGTCTACTCTTTGTTTTCGTCTCGCTTTCGCGCTTCGATTTGAACGGATCGTGAATGTCGACGATTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGACGCTTATCCGCCTCCAGGACATCCGCCGCCGGCTGGTTATCCTCCTGCTGGTTATCCACAGGCAGGATATCCGCCTCCGGCTTATGGACCGGCGTACGGTCAACCTCCGCCTCAATATCAACAACAACGGCAGGAAGTTGGATTCCTCGAAGGCTGGTAAGTATTTGCTTCTATTTCATTTTGATCTTCCTTGATGCGATTCAAACTGCGTTTTTCGAAATGAAATTGAGGCGATGCGTCTTTACGGTTAGAAAATAGAGAATGAATCGGTGGTTTTGCGGAGGAGATTGTTAGTTTAGGAAATAGTGTTTGTGTTGGCTTGTAGTGTTAGTGGATTGATTGCTGTTTTGGTGTTGAGGAATTTGGAAACCGTCGAGTCGTAAAAACTGACACAGGTTGGAAAGATATTGCTCACATGAACAGAGGCGCAGATTTCGGTGATTTGTCGAACCCTTTTTCGTTTCGGTGGAACAAAAAGTGCTTTTCGTTTTCTTTCTTTTTCAAACAAAAAATGCGTTCCAGAAGGGTCTTTTTGTCATTTTCAAAAATTTTGAATTTTGTGATTTATTTATTTAAACCTCAATTTTTTGAAATGAAAATTTTAGACTAACTATACACAAAATTAAAATTAGTTTCGGTGCATTTTTTCGAGTACGTAGAACTAGATTCGAGCAATTTTAGAGTTAAACTTAGAGATGTCCACTAGACATCTGCCCTGGTCCATAGTCTCCACTTATTTTAATTTTCATCCCGTAAATTTCTCGATTTATTTATTTTTTCATTATAATTTCTATTAAAAAAATGTAAAACATCGGAATAATCTAATAAGCACAAAACACCCGAATTCCAATATTACAATAAATCTAATAAATCTCTAGCCCTGTTTAGCTGAACTCTCGTGTTCATAGTTCATAATTAAATAAAGATTTTTACTATAAAAAAATTGGAATAGGGAAGATATAAGAGAAGTGTAGTTTAGAAGTAATTAAAAGTGTGTGTGAAATTGACAGTGTGGCTGCTCTCTGCTGTTGCTTCGTGTTGGATGCTTGCTTTTAAGGACAGAAGCAGGAAGCTTTTTGTGAGTGAGTGATCATATGGTGTATGAAATTTTAGTTTAATATCCAATGTCGCAATGGCTTTATCTCTATCTTTATATTCTTATTTATACCAACTCTATTTAAATCTCTTCATATTTCTTGAACCTTGCTCCTCAACTATATATATATACATTTTCAGCATTTATTATCTTCAATTTACATCATTTTTATTATTATTGTTTCTTTTGTGCTATGCTTTTCACTAG

mRNA sequence

AAAAAAGAAAATAAAAAATCCGGACCCAAATTAATTCTTTATTCAAATAGTTTTCATAGTTATAGCTCTCTGGTTTCTCTGTTTGGCTACTAATAAAATCCATCCGATCGCTCAAGAAATCTCCGAGAGAAAGAAGCGGAAGAAAATGAGTTACTACAACCAGCCTCCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGAAGGTTATCCGAAGGACGCTTATCCGCCTCCAGGACATCCGCCGCCGGCTGGTTATCCTCCTGCTGGTTATCCACAGGCAGGATATCCGCCTCCGGCTTATGGACCGGCGTACGGTCAACCTCCGCCTCAATATCAACAACAACGGCAGGAAGTTGGATTCCTCGAAGGCTGTGTGGCTGCTCTCTGCTGTTGCTTCGTGTTGGATGCTTGCTTTTAAGGACAGAAGCAGGAAGCTTTTTGTGAGTGAGTGATCATATGGTGTATGAAATTTTAGTTTAATATCCAATGTCGCAATGGCTTTATCTCTATCTTTATATTCTTATTTATACCAACTCTATTTAAATCTCTTCATATTTCTTGAACCTTGCTCCTCAACTATATATATATACATTTTCAGCATTTATTATCTTCAATTTACATCATTTTTATTATTATTGTTTCTTTTGTGCTATGCTTTTCACTAG

Coding sequence (CDS)

ATGAGTTACTACAACCAGCCTCCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGGAAGGTTATCCGAAGGACGCTTATCCGCCTCCAGGACATCCGCCGCCGGCTGGTTATCCTCCTGCTGGTTATCCACAGGCAGGATATCCGCCTCCGGCTTATGGACCGGCGTACGGTCAACCTCCGCCTCAATATCAACAACAACGGCAGGAAGTTGGATTCCTCGAAGGCTGTGTGGCTGCTCTCTGCTGTTGCTTCGTGTTGGATGCTTGCTTTTAA

Protein sequence

MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF

Homology

[Close]

BLAST of CmaCh11G016960 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-28
Identity = 71/101 (70.30%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----P 60
          MS YNQP  PVGVPPPQGYPPEGYPKDAYPP G+PP      GYPP GYPQ GYP    P
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          P Y P Y  PPPQ+QQQ+   GFLEGC+AALCCC +LDACF
Sbjct: 61 PPYAPQY-PPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmaCh11G016960 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19
Identity = 59/100 (59.00%), Postives = 63/100 (63.00%), Query Frame = 1


Query: 5   NQPPPPVGVPPPQGYPPEGYPKDAYPPPG-------HPPPAGYPPAGYPQAGYPPPAYG- 64
           +Q PP VGVPP   YP EG PKDAYPPPG       +PPP GYP  GYP  GYPP  Y  
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65  ---PAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
              P  G PP Q QQQ+   G LEGC+AALCC  VLDACF
Sbjct: 62  QGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of CmaCh11G016960 vs. Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-07
Identity = 33/51 (64.71%), Postives = 34/51 (66.67%), Query Frame = 1


Query: 15  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ 66
           PPQGYPP+GYP    PPP   PP GYPP GYP  GYPPP  GP    PPPQ
Sbjct: 391 PPQGYPPQGYPP---PPPQGYPPQGYPPQGYPPQGYPPPPQGPPPQGPPPQ 438

[Close]

BLAST of CmaCh11G016960 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-07
Identity = 33/51 (64.71%), Postives = 34/51 (66.67%), Query Frame = 1


Query: 15  PPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQPPPQ 66
           PPQGYPP+GYP    PPP   PP GYPP GYP  GYPPP  GP    PPPQ
Sbjct: 384 PPQGYPPQGYPP---PPPQGYPPQGYPPQGYPPQGYPPPPQGPPPQGPPPQ 431

[Close]

BLAST of CmaCh11G016960 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-31
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPEGYP-KDAYPPPGHPPPAGYPPAGYPQAGY-PPPAYGPAY 61
          SYY QPPPPVGVPPPQGYPP+GYP KDAYPP G+PP  GYPPAGYP  GY PPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-QPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          G  PPPQ+Q Q++EVGF+EGC+AALCCCF+LD CF
Sbjct: 63 GHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of CmaCh11G016960 vs. TrEMBL
Match: M0TKV1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 8.3e-30
Identity = 72/93 (77.42%), Postives = 75/93 (80.65%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGYPKDAYPPPG+ PP GYPPAGYPQ GYPPP Y P Y 
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGY-PPQGYPPAGYPQQGYPPPGYPPPYA 60

Query: 61 QPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          QPPP   QQ     FLEGC+AALCCC +LDACF
Sbjct: 61 QPPP--PQQSSGPSFLEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmaCh11G016960 vs. TrEMBL
Match: K4CX01_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 5.4e-29
Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGY KDAYPPPG+ P  GYPP GYPQ GYPPP Y P YG
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYSKDAYPPPGY-PQQGYPPQGYPQQGYPPPQYAPQYG 60

Query: 61 QPPP-QYQQQRQEVGFLEGCVAALCCCFVLDACF 94
           PPP Q+QQQ    G ++GC+AALCCC +LDACF
Sbjct: 61 APPPQQHQQQSSSTGLMQGCLAALCCCCLLDACF 93

[Close]

BLAST of CmaCh11G016960 vs. TrEMBL
Match: A0A0V0H2U3_SOLCH (Putative CYSTM1 family protein A-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.5e-28
Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGY KDAYPPPG+ P  GYPP GYPQ GYPPP Y P YG
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYSKDAYPPPGY-PQQGYPPQGYPQQGYPPPQYAPQYG 60

Query: 61 QPPP-QYQQQRQEVGFLEGCVAALCCCFVLDACF 94
           PPP Q+QQQ    G L+GC+AALCCC +LDA F
Sbjct: 61 APPPQQHQQQSSSTGLLQGCLAALCCCCLLDAIF 93

[Close]

BLAST of CmaCh11G016960 vs. TrEMBL
Match: A0A0J8BHZ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g222920 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 5.9e-28
Identity = 73/99 (73.74%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHP----PPAGYPPAG-YP-QAGYPPPA 60
          MSYYNQ  PPVGVPPPQGYPPEGYPKDAYPP G+P    P  GYPP G YP Q GYPPP 
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPAGYPAQGYPQGGYPPPGAYPQQGGYPPPQ 60

Query: 61 YGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          Y P Y QPPP  QQQ+Q VGF+EGC+AALCCC +LDACF
Sbjct: 61 YAPQYAQPPP--QQQQQSVGFMEGCLAALCCCCLLDACF 97

[Close]

BLAST of CmaCh11G016960 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 126.3 bits (316), Expect = 9.7e-30
Identity = 71/101 (70.30%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPA----GYPPAGYPQAGYP----P 60
          MS YNQP  PVGVPPPQGYPPEGYPKDAYPP G+PP      GYPP GYPQ GYP    P
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PAYGPAYGQPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          P Y P Y  PPPQ+QQQ+   GFLEGC+AALCCC +LDACF
Sbjct: 61 PPYAPQY-PPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of CmaCh11G016960 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 6.9e-20
Identity = 55/96 (57.29%), Postives = 60/96 (62.50%), Query Frame = 1


Query: 4  YNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYG---PAYG 63
          Y+Q   PVG PPPQGYPP+                GYPPAGYP AGYPPP Y    PA G
Sbjct: 2  YHQEQHPVGAPPPQGYPPKD---------------GYPPAGYPPAGYPPPGYAQGYPAQG 61

Query: 64 QPPPQYQ---QQRQEVGFLEGCVAALCCCFVLDACF 94
           PPPQY    QQ+Q  G LEGC+AALCCC +LDACF
Sbjct: 62 YPPPQYSQAPQQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of CmaCh11G016960 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-18
Identity = 58/122 (47.54%), Postives = 64/122 (52.46%), Query Frame = 1


Query: 4   YNQPPPPVGVPPPQGYPP-EGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYG-----P 63
           Y  P  PV  PPPQGYPP EGYP   YPPP   PP  YP AGYP AGYPPP  G     P
Sbjct: 3   YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64  AYGQPPPQYQQ--------------------------QRQEVGFLEGCVAALCCCFVLDA 94
           A G PPPQY Q                          ++   GF+EGC+A LCCC +L+A
Sbjct: 63  AQGYPPPQYPQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEA 122

[Close]

BLAST of CmaCh11G016960 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 54.7 bits (130), Expect = 3.6e-08
Identity = 39/65 (60.00%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 9  PPVGVPPPQGYPPEGYPKDAY-PPPGHPPPAGYPPAGYPQA--GYPP-PAYG-----PAY 65
          PP G PPP  YPP GYP+  Y PPPG  PPAGYPP  YP A  GYPP P YG     P Y
Sbjct: 17 PPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAPGY 76

[Close]

BLAST of CmaCh11G016960 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.0e-07
Identity = 36/65 (55.38%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYGQ 61
          S Y  PPPP         PP GYP  AYPP G  PPAGYPPAGYP AGYP   Y P++G 
Sbjct: 41 SSYPYPPPP---------PPHGYPPVAYPPHGGYPPAGYPPAGYPPAGYPAHGY-PSHGY 95

Query: 62 PPPQY 67
          P P +
Sbjct: 101 PRPSH 95

[Close]

BLAST of CmaCh11G016960 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31
Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPEGYP-KDAYPPPGHPPPAGYPPAGYPQAGY-PPPAYGPAY 61
          SYY QPPPPVGVPPPQGYPP+GYP KDAYPP G+PP  GYPPAGYP  GY PPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-QPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          G  PPPQ+Q Q++EVGF+EGC+AALCCCF+LD CF
Sbjct: 63 GHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of CmaCh11G016960 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-30
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPEGYP-KDAYPPPGHPPPAGYPPAGYPQAGYPP-PAYGPAY 61
          SYY QPPPPVGVPPPQGYPP+GYP KDAYPP G+PP  GYPPAGYP  GYPP P YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 -GQPPPQYQ-QQRQEVGFLEGCVAALCCCFVLDACF 94
           G PPPQYQ  Q++EVGF+EGC+AALCCCF+LD CF
Sbjct: 63 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 98

[Close]

BLAST of CmaCh11G016960 vs. NCBI nr
Match: gi|697166984|ref|XP_009592331.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Nicotiana tomentosiformis])

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29
Identity = 71/94 (75.53%), Postives = 76/94 (80.85%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGYPKDAYPPPG+ P  GYPP GYPQ GYPP  Y P YG
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGY-PQQGYPPQGYPQQGYPPQGYPPQYG 60

Query: 61 QPPPQYQQQRQ-EVGFLEGCVAALCCCFVLDACF 94
           PPPQ QQQ+    GF+EGC+AALCCC +LDACF
Sbjct: 61 APPPQQQQQQSGSTGFMEGCLAALCCCCLLDACF 93

[Close]

BLAST of CmaCh11G016960 vs. NCBI nr
Match: gi|695046436|ref|XP_009411048.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Musa acuminata subsp. malaccensis])

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29
Identity = 72/93 (77.42%), Postives = 75/93 (80.65%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGYPKDAYPPPG+ PP GYPPAGYPQ GYPPP Y P Y 
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGY-PPQGYPPAGYPQQGYPPPGYPPPYA 60

Query: 61 QPPPQYQQQRQEVGFLEGCVAALCCCFVLDACF 94
          QPPP   QQ     FLEGC+AALCCC +LDACF
Sbjct: 61 QPPP--PQQSSGPSFLEGCLAALCCCCLLDACF 90

[Close]

BLAST of CmaCh11G016960 vs. NCBI nr
Match: gi|698501895|ref|XP_009796626.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Nicotiana sylvestris])

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-29
Identity = 71/94 (75.53%), Postives = 76/94 (80.85%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPEGYPKDAYPPPGHPPPAGYPPAGYPQAGYPPPAYGPAYG 60
          MSYYNQ  PPVGVPPPQGYPPEGYPKDAYPPPG+ P  GYPP GYPQ GYPP  Y P YG
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGY-PQQGYPPQGYPQQGYPPQGYPPQYG 60

Query: 61 QPPPQYQQQRQ-EVGFLEGCVAALCCCFVLDACF 94
           PPPQ QQQ+    GF+EGC+AALCCC +LDACF
Sbjct: 61 APPPQQQQQQSGSSGFMEGCLAALCCCCLLDACF 93

The following BLAST results are available for this feature:

BLAST of CmaCh11G016960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	1.7e-28	70.30	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	1.1e-19	59.00	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
OPSD_LOLFO	6.3e-07	64.71	Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	6.3e-07	64.71	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]

BLAST of CmaCh11G016960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2W8_CUCSA	1.2e-31	77.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1	[more]
M0TKV1_MUSAM	8.3e-30	77.42	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
K4CX01_SOLLC	5.4e-29	73.40	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0V0H2U3_SOLCH	4.5e-28	73.40	Putative CYSTM1 family protein A-like OS=Solanum chacoense PE=4 SV=1	[more]
A0A0J8BHZ1_BETVU	5.9e-28	73.74	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g222920 PE=4 S...	[more]

BLAST of CmaCh11G016960 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	9.7e-30	70.30	proline-rich family protein	[more]
AT5G67600.1	6.9e-20	57.29	unknown protein	[more]
AT3G49845.1	2.2e-18	47.54	unknown protein	[more]
AT5G45350.1	3.6e-08	60.00	proline-rich family protein	[more]
AT5G17650.1	3.0e-07	55.38	glycine/proline-rich protein	[more]

BLAST of CmaCh11G016960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724815\|ref\|XP_011658867.1\|	1.7e-31	77.89	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659110097\|ref\|XP_008455047.1\|	1.1e-30	78.13	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|697166984\|ref\|XP_009592331.1\|	1.2e-29	75.53	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Nicotian...	[more]
gi\|695046436\|ref\|XP_009411048.1\|	1.2e-29	77.42	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Musa acu...	[more]
gi\|698501895\|ref\|XP_009796626.1\|	2.0e-29	75.53	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Nic...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G016960.1	CmaCh11G016960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..93 score: 4.0
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..93 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G016960	CsaV3_7G007760	Cucumber (Chinese Long) v3	cmacucB0171
CmaCh11G016960	Carg16322	Silver-seed gourd	carcmaB0630
CmaCh11G016960	Carg23041	Silver-seed gourd	carcmaB1025

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G016960	Watermelon (97103) v2	cmawmbB104
CmaCh11G016960	Wax gourd	cmawgoB0116
CmaCh11G016960	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh11G016960	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh11G016960	Cucurbita maxima (Rimu)	cmacmaB163
CmaCh11G016960	Cucumber (Gy14) v1	cgycmaB0620
CmaCh11G016960	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G016960	Cucurbita moschata (Rifu)	cmacmoB133
CmaCh11G016960	Cucurbita moschata (Rifu)	cmacmoB143
CmaCh11G016960	Cucurbita moschata (Rifu)	cmacmoB156
CmaCh11G016960	Wild cucumber (PI 183967)	cmacpiB143
CmaCh11G016960	Cucumber (Chinese Long) v2	cmacuB146
CmaCh11G016960	Melon (DHL92) v3.5.1	cmameB098
CmaCh11G016960	Watermelon (Charleston Gray)	cmawcgB101
CmaCh11G016960	Watermelon (97103) v1	cmawmB127
CmaCh11G016960	Cucurbita pepo (Zucchini)	cmacpeB114
CmaCh11G016960	Cucurbita pepo (Zucchini)	cmacpeB116
CmaCh11G016960	Cucurbita pepo (Zucchini)	cmacpeB136
CmaCh11G016960	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G016960	Bottle gourd (USVL1VR-Ls)	cmalsiB115
CmaCh11G016960	Bottle gourd (USVL1VR-Ls)	cmalsiB116
CmaCh11G016960	Cucumber (Gy14) v2	cgybcmaB895
CmaCh11G016960	Melon (DHL92) v3.6.1	cmamedB106
CmaCh11G016960	Silver-seed gourd	carcmaB0405
CmaCh11G016960	Silver-seed gourd	carcmaB0525