CmoCh19G005570 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Unknown protein
Location	Cmo_Chr19 : 6415121 .. 6415659 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCTGTTGTTCATTCTTTGTAGTTTTATAGTTATCGCTCTCGTCTCTCTGTTTGGCAACGAAGAAAAAATCAATCTGATCGTTCAAGCAATCTCAAGAGAAAAAGAGAGGGAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTAAACCGATACTCTTACTTTTTCCCTTTCTTACTCCCGGCGCACTTTCTTTGATTTCTAAGGTTCAAATCGAATGGATCTTGCTGTTTTCTTCCACAAAATCGATTTAATCTTTGTTTTCGTTTCGATTTGACCGATTTTGGCTGCGATTCTGTGAATTTCAACGATTTTAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

mRNA sequence

GCCCTGTTGTTCATTCTTTGTAGTTTTATAGTTATCGCTCTCGTCTCTCTGTTTGGCAACGAAGAAAAAATCAATCTGATCGTTCAAGCAATCTCAAGAGAAAAAGAGAGGGAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCCTATCCACCACAAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

Homology

[Close]

BLAST of CmoCh19G005570 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-21
Identity = 60/87 (68.97%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP---- 60
          MS YNQP  PVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYGPAYGPPQPQHSNQKKEVGFVEG 80
          PP Y P Y PP PQH  Q+   GF+EG
Sbjct: 61 PPPYAPQY-PPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of CmoCh19G005570 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 43/62 (69.35%), Postives = 43/62 (69.35%), Query Frame = 1


Query: 4   YNQPPPPVGVPPPQGYPPQG-YPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGP 63
           Y  PPPP G PP QGYPPQG YPP   YPPQGYPPQ GYPP GYPPQG PP    P   P
Sbjct: 387 YQPPPPPQGYPP-QGYPPQGAYPPPQGYPPQGYPPQ-GYPPQGYPPQGAPPQVEAPQGAP 446

Query: 64  PQ 65
           PQ
Sbjct: 447 PQ 446

[Close]

BLAST of CmoCh19G005570 vs. Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 39/52 (75.00%), Postives = 39/52 (75.00%), Query Frame = 1


Query: 15  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQ 67
           PPQGYPPQGYPP    PPQGYPPQ GYPP GYPPQGYPPP  GP    P PQ
Sbjct: 391 PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQ 438

[Close]

BLAST of CmoCh19G005570 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 39/52 (75.00%), Postives = 39/52 (75.00%), Query Frame = 1


Query: 15  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQ 67
           PPQGYPPQGYPP    PPQGYPPQ GYPP GYPPQGYPPP  GP    P PQ
Sbjct: 384 PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPPPPQGPPPQGPPPQ 431

[Close]

BLAST of CmoCh19G005570 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-10
Identity = 46/86 (53.49%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 5  NQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPPAYG 64
          +Q PP VGVPP   YP +G PPKDAYPP       QGYPP  GYP  GYPPQGYPP  Y 
Sbjct: 2  SQQPPAVGVPPSHAYPAEG-PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYP 61

Query: 65 ----PAYGPPQPQHSNQKKEVGFVEG 80
              P  G P  Q   QK   G +EG
Sbjct: 62 EQGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of CmoCh19G005570 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-30
Identity = 73/80 (91.25%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY-PPPAYGPAY 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY PPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-PPQPQHSNQKKEVGFVEG 80
          G  P PQH NQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of CmoCh19G005570 vs. TrEMBL
Match: A0A022RF97_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017094mg PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 59/80 (73.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60
          MSYY    PPVGVPPPQGYPPQGYPP+  YPPQGYPPQ GYPP GYPPQGYPPP Y P Y
Sbjct: 1  MSYYKDNQPPVGVPPPQGYPPQGYPPQ-GYPPQGYPPQ-GYPPQGYPPQGYPPPQYAPQY 60

Query: 61 GPPQPQHSNQK-KEVGFVEG 80
          G P PQ  ++K KE GF+EG
Sbjct: 61 GAPPPQQKHKKDKEGGFIEG 78

[Close]

BLAST of CmoCh19G005570 vs. TrEMBL
Match: A0A0D2ST80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 8.7e-20
Identity = 58/80 (72.50%), Postives = 60/80 (75.00%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPP GYPPQG   P GYP QGYPP  Y P Y
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQG--YPQGYPQQGYPPQGYPPQY 60

Query: 61 GPPQPQHSNQKKEVGFVEGW 81
            P PQ   QK+  GFVEGW
Sbjct: 61 AQPPPQ---QKQSSGFVEGW 75

[Close]

BLAST of CmoCh19G005570 vs. TrEMBL
Match: D7LH70_ARALL (Expressed protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483214 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.3e-19
Identity = 60/83 (72.29%), Postives = 63/83 (75.90%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPPPAY 60
          MS YNQP  PVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYPPP Y
Sbjct: 3  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPPP-Y 62

Query: 61 GPAYGPPQPQHSNQKKEVGFVEG 80
           P Y PP PQH  Q+   GF+EG
Sbjct: 63 APQY-PPPPQHQQQQNSPGFLEG 80

[Close]

BLAST of CmoCh19G005570 vs. TrEMBL
Match: A0A0D2TVE9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-18
Identity = 57/79 (72.15%), Postives = 59/79 (74.68%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPP GYPPQG   P GYP QGYPP  Y P Y
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQG--YPQGYPQQGYPPQGYPPQY 60

Query: 61 GPPQPQHSNQKKEVGFVEG 80
            P PQ   QK+  GFVEG
Sbjct: 61 AQPPPQ---QKQSSGFVEG 74

[Close]

BLAST of CmoCh19G005570 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 100.5 bits (249), Expect = 4.9e-22
Identity = 60/87 (68.97%), Postives = 63/87 (72.41%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYP---- 60
          MS YNQP  PVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYGPAYGPPQPQHSNQKKEVGFVEG 80
          PP Y P Y PP PQH  Q+   GF+EG
Sbjct: 61 PPPYAPQY-PPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of CmoCh19G005570 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 5.6e-10
Identity = 41/74 (55.41%), Postives = 43/74 (58.11%), Query Frame = 1


Query: 4  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP-----AGYPPQGYPPPAYG- 63
          Y  P  PV  PPPQGYP     PK+ YPP GYPP  GYPP     AGYPP GYPPP  G 
Sbjct: 3  YQDPQHPVSAPPPQGYP-----PKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGY 62

Query: 64 ----PAYGPPQPQH 68
              PA G P PQ+
Sbjct: 63 GQGYPAQGYPPPQY 71

[Close]

BLAST of CmoCh19G005570 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-09
Identity = 44/80 (55.00%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 4  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPP----AGYPPQGYPPPAYGPA 63
          Y+Q   PVG PPPQGYP     PKD YPP GYPP  GYPP     GYP QGYPPP Y  A
Sbjct: 2  YHQEQHPVGAPPPQGYP-----PKDGYPPAGYPP-AGYPPPGYAQGYPAQGYPPPQYSQA 61

Query: 64 YGPPQPQHSNQKKEVGFVEG 80
               PQ   QK+  G +EG
Sbjct: 62 -----PQ---QKQNAGMLEG 67

[Close]

BLAST of CmoCh19G005570 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-09
Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAYG 61
          S Y  PPP    PPP GYPP  YPP   YPP GYPP  GYPPAGYP  GY      P++G
Sbjct: 41 SSYPYPPP----PPPHGYPPVAYPPHGGYPPAGYPP-AGYPPAGYPAHGY------PSHG 96

Query: 62 PPQPQHS 69
           P+P HS
Sbjct: 101 YPRPSHS 96

[Close]

BLAST of CmoCh19G005570 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-08
Identity = 36/62 (58.06%), Postives = 38/62 (61.29%), Query Frame = 1


Query: 18 GYPPQGYPPKDAYPPQGYPPQGGYPPAG-YPPQGYPPPAYGPAYG--PPQPQHSNQKKEV 77
          GYPP GYPP  AYPP GYP QG  PP G YPP GYPP AY PA G  PP P +       
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAP 74

[Close]

BLAST of CmoCh19G005570 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-30
Identity = 73/80 (91.25%), Postives = 73/80 (91.25%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY-PPPAYGPAY 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGY PPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-PPQPQHSNQKKEVGFVEG 80
          G  P PQH NQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of CmoCh19G005570 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 134.8 bits (338), Expect = 6.6e-29
Identity = 71/81 (87.65%), Postives = 72/81 (88.89%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAY 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP P YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 G--PPQPQHSNQKKEVGFVEG 80
          G  PP    +NQKKEVGFVEG
Sbjct: 63 GGHPPPQYQNNQKKEVGFVEG 83

[Close]

BLAST of CmoCh19G005570 vs. NCBI nr
Match: gi|848872427|ref|XP_012836776.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Erythranthe guttata])

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-20
Identity = 59/80 (73.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60
          MSYY    PPVGVPPPQGYPPQGYPP+  YPPQGYPPQ GYPP GYPPQGYPPP Y P Y
Sbjct: 1  MSYYKDNQPPVGVPPPQGYPPQGYPPQ-GYPPQGYPPQ-GYPPQGYPPQGYPPPQYAPQY 60

Query: 61 GPPQPQHSNQK-KEVGFVEG 80
          G P PQ  ++K KE GF+EG
Sbjct: 61 GAPPPQQKHKKDKEGGFIEG 78

[Close]

BLAST of CmoCh19G005570 vs. NCBI nr
Match: gi|763780233|gb|KJB47304.1| (hypothetical protein B456_008G020000 [Gossypium raimondii])

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 58/80 (72.50%), Postives = 60/80 (75.00%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPP GYPPQG   P GYP QGYPP  Y P Y
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQG--YPQGYPQQGYPPQGYPPQY 60

Query: 61 GPPQPQHSNQKKEVGFVEGW 81
            P PQ   QK+  GFVEGW
Sbjct: 61 AQPPPQ---QKQSSGFVEGW 75

[Close]

BLAST of CmoCh19G005570 vs. NCBI nr
Match: gi|727448578|ref|XP_010505922.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Camelina sativa])

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-19
Identity = 59/91 (64.84%), Postives = 61/91 (67.03%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYP-PKDAYPPQGYPPQGGYPPAGYPPQGYP------- 60
          MS YNQPP  VGVPPPQGYPP+GYP PKDAYPPQGYPPQ GYPP GYPPQGYP       
Sbjct: 1  MSQYNQPP--VGVPPPQGYPPEGYPAPKDAYPPQGYPPQQGYPPQGYPPQGYPPQQGYPP 60

Query: 61 ----PPAYGPAYGPPQPQHSNQKKEVGFVEG 80
              PP Y P Y PP   H  Q    GF+EG
Sbjct: 61 QQGYPPPYAPQYPPPPQHHQQQNNSPGFLEG 89

The following BLAST results are available for this feature:

BLAST of CmoCh19G005570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	8.7e-21	68.97	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
OPSD_ENTDO	2.8e-11	69.35	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]
OPSD_LOLFO	3.1e-10	75.00	Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	3.1e-10	75.00	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]
CYT1B_ARATH	4.0e-10	53.49	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]

BLAST of CmoCh19G005570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2W8_CUCSA	1.4e-30	91.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1	[more]
A0A022RF97_ERYGU	1.3e-20	73.75	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017094mg PE=4 SV=1	[more]
A0A0D2ST80_GOSRA	8.7e-20	72.50	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1	[more]
D7LH70_ARALL	4.3e-19	72.29	Expressed protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_4...	[more]
A0A0D2TVE9_GOSRA	1.6e-18	72.15	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1	[more]

BLAST of CmoCh19G005570 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	4.9e-22	68.97	proline-rich family protein	[more]
AT3G49845.1	5.6e-10	55.41	unknown protein	[more]
AT5G67600.1	1.6e-09	55.00	unknown protein	[more]
AT5G17650.1	3.6e-09	56.72	glycine/proline-rich protein	[more]
AT5G45350.1	1.1e-08	58.06	proline-rich family protein	[more]

BLAST of CmoCh19G005570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724815\|ref\|XP_011658867.1\|	2.1e-30	91.25	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659110097\|ref\|XP_008455047.1\|	6.6e-29	87.65	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|848872427\|ref\|XP_012836776.1\|	1.9e-20	73.75	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Ery...	[more]
gi\|763780233\|gb\|KJB47304.1\|	1.3e-19	72.50	hypothetical protein B456_008G020000 [Gossypium raimondii]	[more]
gi\|727448578\|ref\|XP_010505922.1\|	2.1e-19	64.84	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Camelina...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005570.1	CmoCh19G005570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 15..26 score: 8.1E-7coord: 45..57 score: 8.
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..80 score: 1.4
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..80 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005570	Carg16322	Silver-seed gourd	carcmoB0615

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005570	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005570	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G005570	Bottle gourd (USVL1VR-Ls)	cmolsiB467
CmoCh19G005570	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005570	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005570	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005570	Melon (DHL92) v3.6.1	cmomedB550
CmoCh19G005570	Silver-seed gourd	carcmoB0998
CmoCh19G005570	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005570	Watermelon (97103) v2	cmowmbB505
CmoCh19G005570	Watermelon (97103) v2	cmowmbB512
CmoCh19G005570	Wax gourd	cmowgoB0635
CmoCh19G005570	Wax gourd	cmowgoB0642
CmoCh19G005570	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005570	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005570	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005570	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005570	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005570	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005570	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005570	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005570	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005570	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005570	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005570	Watermelon (97103) v1	cmowmB478
CmoCh19G005570	Watermelon (97103) v1	cmowmB496