CmaCh19G005440 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G005440
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr19 : 6247146 .. 6247807 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGTTCATTATTCGTAGTTTTATAGTTATTGCTCTCGTCTCTTTGTTTGGCAACGGAGAGAAGAGCAATCTGATCGTTCAAGCAATCTCAAGAGAAAAAGAGAGGAAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTAAACCGATACTCTTACTTTTTCCCTTTCTTACTTCCGGCGCACTTTCTTTGATTTCTAAGGTTCAAATCGAATGGATCTTGCTGTCTTCTTCCACAAAATCTATTTAATCTTTGTTTTCGTTTCGATTTGACCGATTTTGGCTGCGATTCTGTGAATTTCGACGATTTTAGGTTATCCGCCGCAAGGATATCCGCCGAAGGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTACGGACCACCTCAGCCTCAACATCCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAAGTCTCTGCTTCTCTTTCATTTTACAACCTTAGTTGATGCGATTTCGTTGGCGTTTTCGAGTTGAAATTGAGTCCGTGCGTCTTCGCTGCGGCGAAGTACGGTTGCGGTTACCGATTAGTTGATTAATCCGTCTTCTGCG

mRNA sequence

TGTTGTTCATTATTCGTAGTTTTATAGTTATTGCTCTCGTCTCTTTGTTTGGCAACGGAGAGAAGAGCAATCTGATCGTTCAAGCAATCTCAAGAGAAAAAGAGAGGAAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAGGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTACGGACCACCTCAGCCTCAACATCCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAAGTCTCTGCTTCTCTTTCATTTTACAACCTTAGTTGATGCGATTTCGTTGGCGTTTTCGAGTTGAAATTGAGTCCGTGCGTCTTCGCTGCGGCGAAGTACGGTTGCGGTTACCGATTAGTTGATTAATCCGTCTTCTGCG

Coding sequence (CDS)

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAGGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTACGGACCACCTCAGCCTCAACATCCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAA

Protein sequence

MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQPQHPNQKKEVGFVEGW

Homology

[Close]

BLAST of CmaCh19G005440 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-17
Identity = 57/86 (66.28%), Postives = 60/86 (69.77%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAGYPPQGYP---- 60
          MS YNQP  PVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYG---PPQPQHPNQKKEVGFVEG 76
          PP Y    PP PQH  Q+   GF+EG
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of CmaCh19G005440 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.5e-10
Identity = 43/60 (71.67%), Postives = 45/60 (75.00%), Query Frame = 1


Query: 6   QPPPPVGVPPPQGYPPQGYPPKDAYPPP-GYPPQGGYPPAGYPPQGYPPPAYGPPQPQHP 65
           QPPPP     PQGYPPQGYPP+ AYPPP GYPPQ GYPP GYPPQGYPP    PPQ + P
Sbjct: 388 QPPPP-----PQGYPPQGYPPQGAYPPPQGYPPQ-GYPPQGYPPQGYPPQG-APPQVEAP 440

[Close]

BLAST of CmaCh19G005440 vs. Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-09
Identity = 39/50 (78.00%), Postives = 39/50 (78.00%), Query Frame = 1


Query: 15  PPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQPQHP 65
           PPQGYPPQGYPP    PP GYPPQ GYPP GYPPQGYPPP  GPP PQ P
Sbjct: 391 PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPPPPQGPP-PQGP 435

[Close]

BLAST of CmaCh19G005440 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-09
Identity = 39/50 (78.00%), Postives = 39/50 (78.00%), Query Frame = 1


Query: 15  PPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQPQHP 65
           PPQGYPPQGYPP    PP GYPPQ GYPP GYPPQGYPPP  GPP PQ P
Sbjct: 384 PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPPPPQGPP-PQGP 428

[Close]

BLAST of CmaCh19G005440 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-09
Identity = 45/86 (52.33%), Postives = 48/86 (55.81%), Query Frame = 1


Query: 5  NQPPPPVGVPPPQGYPPQGYPPKDAYPPP-------GYPPQGGYPPAGYPPQGYPPPAY- 64
          +Q PP VGVPP   YP +G PPKDAYPPP       GYPP  GYP  GYPPQGYPP  Y 
Sbjct: 2  SQQPPAVGVPPSHAYPAEG-PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYP 61

Query: 65 -------GPPQPQHPNQKKEVGFVEG 76
                 G P  Q   QK   G +EG
Sbjct: 62 EQGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of CmaCh19G005440 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.4e-27
Identity = 69/80 (86.25%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGY-PPPAYGP-- 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGY PPP YGP  
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 ---PQPQHPNQKKEVGFVEG 76
             P PQH NQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of CmaCh19G005440 vs. TrEMBL
Match: A0A0D2ST80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-20
Identity = 59/79 (74.68%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG---GYPPAGYPPQGYPPPAYG 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPPPGYPPQG   GYP  GYPPQGYPP    
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYPPQYAQ 60

Query: 61 PPQPQHPNQKKEVGFVEGW 77
          PP    P QK+  GFVEGW
Sbjct: 61 PP----PQQKQSSGFVEGW 75

[Close]

BLAST of CmaCh19G005440 vs. TrEMBL
Match: A0A0D2TVE9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.1e-19
Identity = 58/78 (74.36%), Postives = 60/78 (76.92%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG---GYPPAGYPPQGYPPPAYG 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPPPGYPPQG   GYP  GYPPQGYPP    
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYPPQYAQ 60

Query: 61 PPQPQHPNQKKEVGFVEG 76
          PP    P QK+  GFVEG
Sbjct: 61 PP----PQQKQSSGFVEG 74

[Close]

BLAST of CmaCh19G005440 vs. TrEMBL
Match: M0TKV1_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.0e-19
Identity = 58/77 (75.32%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPP- 60
          MSYYNQ  PPVGVPPPQGYPP+GY PKDAYPPPGYPPQ GYPPAGYP QGYPPP Y PP 
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGY-PKDAYPPPGYPPQ-GYPPAGYPQQGYPPPGYPPPY 60

Query: 61 -QPQHPNQKKEVGFVEG 76
           QP  P Q     F+EG
Sbjct: 61 AQPPPPQQSSGPSFLEG 75

[Close]

BLAST of CmaCh19G005440 vs. TrEMBL
Match: A0A0B0MRS3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_22046 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-18
Identity = 56/78 (71.79%), Postives = 59/78 (75.64%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG---GYPPAGYPPQGYPPPAYG 60
          MSYYNQ  PPVGVPP QGYPP+GYPPKDAYPPPGYPPQG   GYP  GYPPQGYPP    
Sbjct: 1  MSYYNQQQPPVGVPPSQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYPPQYAQ 60

Query: 61 PPQPQHPNQKKEVGFVEG 76
          PP PQ   QK+  G +EG
Sbjct: 61 PPPPQ---QKQSSGIIEG 75

[Close]

BLAST of CmaCh19G005440 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 90.1 bits (222), Expect = 6.3e-19
Identity = 57/86 (66.28%), Postives = 60/86 (69.77%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAGYPPQGYP---- 60
          MS YNQP  PVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYG---PPQPQHPNQKKEVGFVEG 76
          PP Y    PP PQH  Q+   GF+EG
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of CmaCh19G005440 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-10
Identity = 43/73 (58.90%), Postives = 46/73 (63.01%), Query Frame = 1


Query: 4  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQ-PQ 63
          Y+Q   PVG PPPQGYP     PKD YPP GYPP  GYPP GY  QGYP   Y PPQ  Q
Sbjct: 2  YHQEQHPVGAPPPQGYP-----PKDGYPPAGYPP-AGYPPPGY-AQGYPAQGYPPPQYSQ 61

Query: 64 HPNQKKEVGFVEG 76
           P QK+  G +EG
Sbjct: 62 APQQKQNAGMLEG 67

[Close]

BLAST of CmaCh19G005440 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-08
Identity = 40/75 (53.33%), Postives = 42/75 (56.00%), Query Frame = 1


Query: 4  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPP-----AGYPPQGYPP----- 63
          Y  P  PV  PPPQGYP     PK+ YPP GYPP  GYPP     AGYPP GYPP     
Sbjct: 3  YQDPQHPVSAPPPQGYP-----PKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGY 62

Query: 64 ----PAYGPPQPQHP 65
              PA G P PQ+P
Sbjct: 63 GQGYPAQGYPPPQYP 72

[Close]

BLAST of CmaCh19G005440 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-08
Identity = 37/62 (59.68%), Postives = 40/62 (64.52%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQP 61
          S Y  PPP    PPP GYPP  YPP   YPP GYPP  GYPPAGYP  GY  P++G P+P
Sbjct: 41 SSYPYPPP----PPPHGYPPVAYPPHGGYPPAGYPP-AGYPPAGYPAHGY--PSHGYPRP 95

Query: 62 QH 64
           H
Sbjct: 101 SH 95

[Close]

BLAST of CmaCh19G005440 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 49.7 bits (117), Expect = 9.4e-07
Identity = 33/62 (53.23%), Postives = 35/62 (56.45%), Query Frame = 1


Query: 18 GYPPQGYPPKDAYPPPGY------PPQGGYPPAGYPPQGYPP-PAYGPPQPQHPNQKKEV 73
          GYPP GYPP  AYPP GY      PP G YPPAGYPP  YPP P   PP P +       
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAP 74

[Close]

BLAST of CmaCh19G005440 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 7.7e-27
Identity = 69/80 (86.25%), Postives = 69/80 (86.25%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGY-PPPAYGP-- 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGY PPP YGP  
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 ---PQPQHPNQKKEVGFVEG 76
             P PQH NQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of CmaCh19G005440 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-25
Identity = 67/81 (82.72%), Postives = 67/81 (82.72%), Query Frame = 1


Query: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPP-PAYGPPQ 61
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPP P YGP  
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 PQHP------NQKKEVGFVEG 76
            HP      NQKKEVGFVEG
Sbjct: 63 GGHPPPQYQNNQKKEVGFVEG 83

[Close]

BLAST of CmaCh19G005440 vs. NCBI nr
Match: gi|763780233|gb|KJB47304.1| (hypothetical protein B456_008G020000 [Gossypium raimondii])

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-20
Identity = 59/79 (74.68%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG---GYPPAGYPPQGYPPPAYG 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPPPGYPPQG   GYP  GYPPQGYPP    
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYPPQYAQ 60

Query: 61 PPQPQHPNQKKEVGFVEGW 77
          PP    P QK+  GFVEGW
Sbjct: 61 PP----PQQKQSSGFVEGW 75

[Close]

BLAST of CmaCh19G005440 vs. NCBI nr
Match: gi|823203355|ref|XP_012436114.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Gossypium raimondii])

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-19
Identity = 58/78 (74.36%), Postives = 60/78 (76.92%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG---GYPPAGYPPQGYPPPAYG 60
          MSYYNQ  PPVGVPPPQGYPP+GYPPKDAYPPPGYPPQG   GYP  GYPPQGYPP    
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYPPQYAQ 60

Query: 61 PPQPQHPNQKKEVGFVEG 76
          PP    P QK+  GFVEG
Sbjct: 61 PP----PQQKQSSGFVEG 74

[Close]

BLAST of CmaCh19G005440 vs. NCBI nr
Match: gi|695046436|ref|XP_009411048.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Musa acuminata subsp. malaccensis])

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-18
Identity = 58/77 (75.32%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPP- 60
          MSYYNQ  PPVGVPPPQGYPP+GY PKDAYPPPGYPPQ GYPPAGYP QGYPPP Y PP 
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGY-PKDAYPPPGYPPQ-GYPPAGYPQQGYPPPGYPPPY 60

Query: 61 -QPQHPNQKKEVGFVEG 76
           QP  P Q     F+EG
Sbjct: 61 AQPPPPQQSSGPSFLEG 75

The following BLAST results are available for this feature:

BLAST of CmaCh19G005440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	1.1e-17	66.28	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
OPSD_ENTDO	8.5e-10	71.67	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]
OPSD_LOLFO	3.2e-09	78.00	Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	3.2e-09	78.00	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]
CYT1B_ARATH	5.5e-09	52.33	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]

BLAST of CmaCh19G005440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2W8_CUCSA	5.4e-27	86.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1	[more]
A0A0D2ST80_GOSRA	1.3e-20	74.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1	[more]
A0A0D2TVE9_GOSRA	3.1e-19	74.36	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1	[more]
M0TKV1_MUSAM	7.0e-19	75.32	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0B0MRS3_GOSAR	5.9e-18	71.79	Uncharacterized protein OS=Gossypium arboreum GN=F383_22046 PE=4 SV=1	[more]

BLAST of CmaCh19G005440 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	6.3e-19	66.28	proline-rich family protein	[more]
AT5G67600.1	4.1e-10	58.90	unknown protein	[more]
AT3G49845.1	1.7e-08	53.33	unknown protein	[more]
AT5G17650.1	1.7e-08	59.68	glycine/proline-rich protein	[more]
AT5G45350.1	9.4e-07	53.23	proline-rich family protein	[more]

BLAST of CmaCh19G005440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724815\|ref\|XP_011658867.1\|	7.7e-27	86.25	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659110097\|ref\|XP_008455047.1\|	7.2e-25	82.72	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|763780233\|gb\|KJB47304.1\|	1.8e-20	74.68	hypothetical protein B456_008G020000 [Gossypium raimondii]	[more]
gi\|823203355\|ref\|XP_012436114.1\|	4.5e-19	74.36	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Gos...	[more]
gi\|695046436\|ref\|XP_009411048.1\|	1.0e-18	75.32	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Musa acu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G005440.1	CmaCh19G005440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 45..57 score: 7.7E-7coord: 15..26 score: 7.
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..76 score: 6.5
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..76 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G005440	Carg16322	Silver-seed gourd	carcmaB0632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G005440	Melon (DHL92) v3.6.1	cmamedB535
CmaCh19G005440	Melon (DHL92) v3.6.1	cmamedB562
CmaCh19G005440	Silver-seed gourd	carcmaB0407
CmaCh19G005440	Silver-seed gourd	carcmaB0528
CmaCh19G005440	Silver-seed gourd	carcmaB1026
CmaCh19G005440	Cucumber (Chinese Long) v3	cmacucB0639
CmaCh19G005440	Watermelon (97103) v2	cmawmbB524
CmaCh19G005440	Watermelon (97103) v2	cmawmbB531
CmaCh19G005440	Wax gourd	cmawgoB0634
CmaCh19G005440	Wax gourd	cmawgoB0642
CmaCh19G005440	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh19G005440	Cucurbita maxima (Rimu)	cmacmaB340
CmaCh19G005440	Cucumber (Gy14) v1	cgycmaB0624
CmaCh19G005440	Cucurbita moschata (Rifu)	cmacmoB494
CmaCh19G005440	Cucurbita moschata (Rifu)	cmacmoB502
CmaCh19G005440	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G005440	Cucurbita moschata (Rifu)	cmacmoB530
CmaCh19G005440	Wild cucumber (PI 183967)	cmacpiB534
CmaCh19G005440	Cucumber (Chinese Long) v2	cmacuB528
CmaCh19G005440	Melon (DHL92) v3.5.1	cmameB463
CmaCh19G005440	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G005440	Watermelon (97103) v1	cmawmB503
CmaCh19G005440	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G005440	Cucurbita pepo (Zucchini)	cmacpeB539
CmaCh19G005440	Bottle gourd (USVL1VR-Ls)	cmalsiB483
CmaCh19G005440	Bottle gourd (USVL1VR-Ls)	cmalsiB484
CmaCh19G005440	Cucumber (Gy14) v2	cgybcmaB945