Lsi03G005930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G005930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Unknown protein
Location	chr03 : 7356349 .. 7356903 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGTCCGCGTTCTTGTTCATTATACGAAGTCTTATAGTTATAGAGTTCTCCTCTCTCTCTGTTTTGCAACAAAGAAATCGAAAGATCAATCCGATCGTTTCAAGAAATCTCAAAGAGAAAAAGAGAGGGAAATATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTAACATCTAAAAACCATTACTCTTTCCTCTCTTACTTCTCCTCCGTTGCACTTTCTTGAAATTCTAAGATCCAGATCGAATGGATCTTACTTTTTCTTTCCGCAAAATTGATCTACTCTTTGTTTTCATCTCGCTTTCGCGCTTTGATTTGTTGAATTTTGACGATTTTAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA

mRNA sequence

TAAAAAGTCCGCGTTCTTGTTCATTATACGAAGTCTTATAGTTATAGAGTTCTCCTCTCTCTCTGTTTTGCAACAAAGAAATCGAAAGATCAATCCGATCGTTTCAAGAAATCTCAAAGAGAAAAAGAGAGGGAAATATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTTACTACGCCCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCACAAGGTTATCCGCCGGCAGGATATCCTCCGAAGGACGCTTATCCGCCGGCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTCCGGCGTATGGTCACCCTCCGCCTCAACATCAAAACCAAAAGAAAGAAGTCGGATTCGTCGAAGGCTGGTAA

Protein sequence

MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAYGHPPPQHQNQKKEVGFVEGW

Homology

[Close]

BLAST of Lsi03G005930 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18
Identity = 59/87 (67.82%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG----GYPPAGYPPQGYPP--- 60
          MS Y QP  PVGVPPPQGYPP GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYGPAYGHPPPQHQNQKKEVGFVEG 81
          PP Y P Y  PPPQHQ Q+   GF+EG
Sbjct: 61 PPPYAPQY-PPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Lsi03G005930 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-10
Identity = 47/86 (54.65%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 5  AQPPPPVGVPPPQGYPPAGYPPKDAYPPAG-------YPPQGGYPPAGYPPQGYPP---P 64
          +Q PP VGVPP   YP  G PPKDAYPP G       YPP  GYP  GYPPQGYPP   P
Sbjct: 2  SQQPPAVGVPPSHAYPAEG-PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYP 61

Query: 65 PAYGPAYGHPPPQHQNQKKEVGFVEG 81
              P  G+PP Q Q QK   G +EG
Sbjct: 62 EQGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of Lsi03G005930 vs. Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-09
Identity = 39/53 (73.58%), Postives = 39/53 (73.58%), Query Frame = 1


Query: 15  PPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAYGHPPPQ 68
           PPQGYPP GYPP    PP GYPPQG YPP GYPPQGYPPPP   P  G PPPQ
Sbjct: 391 PPQGYPPQGYPPP---PPQGYPPQG-YPPQGYPPQGYPPPPQGPPPQG-PPPQ 438

[Close]

BLAST of Lsi03G005930 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.5e-09
Identity = 39/53 (73.58%), Postives = 39/53 (73.58%), Query Frame = 1


Query: 15  PPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAYGHPPPQ 68
           PPQGYPP GYPP    PP GYPPQG YPP GYPPQGYPPPP   P  G PPPQ
Sbjct: 384 PPQGYPPQGYPPP---PPQGYPPQG-YPPQGYPPQGYPPPPQGPPPQG-PPPQ 431

[Close]

BLAST of Lsi03G005930 vs. Swiss-Prot
Match: OPSD_ENTDO (Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-09
Identity = 44/70 (62.86%), Postives = 45/70 (64.29%), Query Frame = 1


Query: 6   QPPPPVGVPPPQGYPPAGYPPKDAY-PPAGYPPQGGYPPAGYPPQGYPP---PPAYGPAY 65
           QPPPP     PQGYPP GYPP+ AY PP GYPPQ GYPP GYPPQGYPP   PP      
Sbjct: 388 QPPPP-----PQGYPPQGYPPQGAYPPPQGYPPQ-GYPPQGYPPQGYPPQGAPPQVEAPQ 447

Query: 66  GHPPPQHQNQ 72
           G PP    NQ
Sbjct: 448 GAPPQGVDNQ 451

[Close]

BLAST of Lsi03G005930 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-34
Identity = 76/80 (95.00%), Postives = 76/80 (95.00%), Query Frame = 1


Query: 2  SYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAY 61
          SYYAQPPPPVGVPPPQGYPP GYPPKDAYPP GYPPQGGYPPAGYPPQGYPPPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-HPPPQHQNQKKEVGFVEG 81
          G HPPPQHQNQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of Lsi03G005930 vs. TrEMBL
Match: A0A0D2ST80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-19
Identity = 59/84 (70.24%), Postives = 60/84 (71.43%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGYPPPPAY 60
          MSYY Q  PPVGVPPPQGYPP GYPPKDAYPP GYPPQG   GYP  GYPPQGYP     
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYP----- 60

Query: 61 GPAYGHPPPQHQNQKKEVGFVEGW 82
           P Y  PPPQ   QK+  GFVEGW
Sbjct: 61 -PQYAQPPPQ---QKQSSGFVEGW 75

[Close]

BLAST of Lsi03G005930 vs. TrEMBL
Match: A0A067LB92_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16346 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.7e-19
Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGY-PPPPA 60
          MSYY Q  PPVGVPPPQGYPP GY PKDAYPP GYPPQG   GYPP GYPPQGY PPPPA
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGY-PKDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPA 60

Query: 61 YGPAYGHPPPQHQN 71
          Y P YG PPPQ Q+
Sbjct: 61 YAPQYGQPPPQQQS 73

[Close]

BLAST of Lsi03G005930 vs. TrEMBL
Match: U5G3V1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.5e-19
Identity = 59/83 (71.08%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGYPPPPAY 60
          MSYY Q  PPVGVPPPQGYPP GYP KDAYPP GYPPQG   GYPP GYPPQGYPPPP Y
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYP-KDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPY 60

Query: 61 GPAYGHPPPQHQNQKKEVGFVEG 81
           P YG PP Q Q      G +EG
Sbjct: 61 APQYGQPPRQQQGSSGP-GCMEG 81

[Close]

BLAST of Lsi03G005930 vs. TrEMBL
Match: A0A022RH20_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-18
Identity = 59/81 (72.84%), Postives = 60/81 (74.07%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPA 60
          MSYY Q  PPVGVPPPQGYPP GYP KDAYPPAGYPPQ GYPP GYPPQGYPP   Y P 
Sbjct: 1  MSYYNQNQPPVGVPPPQGYPPEGYP-KDAYPPAGYPPQ-GYPPQGYPPQGYPPQQGYPPQ 60

Query: 61 YGH-PPPQHQNQKKEVGFVEG 81
          YG  PPPQ Q Q    G +EG
Sbjct: 61 YGQPPPPQQQQQSGSSGCMEG 79

[Close]

BLAST of Lsi03G005930 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 93.6 bits (231), Expect = 6.0e-20
Identity = 59/87 (67.82%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG----GYPPAGYPPQGYPP--- 60
          MS Y QP  PVGVPPPQGYPP GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1  MSQYNQP--PVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPAYGPAYGHPPPQHQNQKKEVGFVEG 81
          PP Y P Y  PPPQHQ Q+   GF+EG
Sbjct: 61 PPPYAPQY-PPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Lsi03G005930 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-11
Identity = 49/98 (50.00%), Postives = 55/98 (56.12%), Query Frame = 1


Query: 8   PPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPP-----------QGYPP--- 67
           PPP G PP +GYPPAGYPP   YPP  Y PQ GYPPAGYPP           QGYPP   
Sbjct: 13  PPPQGYPPKEGYPPAGYPPPAGYPPPQY-PQAGYPPAGYPPPQQGYGQGYPAQGYPPPQY 72

Query: 68  ----PPAY------GPAYGHPPPQHQNQKKEV-GFVEG 81
               PP Y       P YG  PP+++  KK+  GF+EG
Sbjct: 73  PQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEG 109

[Close]

BLAST of Lsi03G005930 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 5.7e-10
Identity = 44/80 (55.00%), Postives = 48/80 (60.00%), Query Frame = 1


Query: 4  YAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAYGH 63
          Y Q   PVG PPPQ     GYPPKD YPPAGYPP  GYPP GY  QGY       PA G+
Sbjct: 2  YHQEQHPVGAPPPQ-----GYPPKDGYPPAGYPP-AGYPPPGY-AQGY-------PAQGY 61

Query: 64 PPPQHQ---NQKKEVGFVEG 81
          PPPQ+     QK+  G +EG
Sbjct: 62 PPPQYSQAPQQKQNAGMLEG 67

[Close]

BLAST of Lsi03G005930 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-09
Identity = 38/67 (56.72%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 2  SYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAY 61
          S Y  PPP    PPP GYPP  YPP   YPPAGYPP  GYPPAGYP  GY       P++
Sbjct: 41 SSYPYPPP----PPPHGYPPVAYPPHGGYPPAGYPP-AGYPPAGYPAHGY-------PSH 95

Query: 62 GHPPPQH 69
          G+P P H
Sbjct: 101 GYPRPSH 95

[Close]

BLAST of Lsi03G005930 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 57.0 bits (136), Expect = 6.3e-09
Identity = 39/67 (58.21%), Postives = 39/67 (58.21%), Query Frame = 1


Query: 18 GYPPAGYPPKDAYPPAGY------PPQGGYPPAGYP-------PQGYPPPPAYG-----P 67
          GYPPAGYPP  AYPPAGY      PP G YPPAGYP       P GYPP P YG     P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAP 74

[Close]

BLAST of Lsi03G005930 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 5.3e-34
Identity = 76/80 (95.00%), Postives = 76/80 (95.00%), Query Frame = 1


Query: 2  SYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAY 61
          SYYAQPPPPVGVPPPQGYPP GYPPKDAYPP GYPPQGGYPPAGYPPQGYPPPP YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 G-HPPPQHQNQKKEVGFVEG 81
          G HPPPQHQNQKKEVGFVEG
Sbjct: 63 GHHPPPQHQNQKKEVGFVEG 82

[Close]

BLAST of Lsi03G005930 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 141.7 bits (356), Expect = 5.5e-31
Identity = 74/81 (91.36%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 2  SYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQGGYPPAGYPPQGYPPPPAYGPAY 61
          SYYAQPPPPVGVPPPQGYPP GYPPKDAYPP GYPPQGGYPPAGYPPQGYPP P YGPAY
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 -GHPPPQHQ-NQKKEVGFVEG 81
           GHPPPQ+Q NQKKEVGFVEG
Sbjct: 63 GGHPPPQYQNNQKKEVGFVEG 83

[Close]

BLAST of Lsi03G005930 vs. NCBI nr
Match: gi|763780233|gb|KJB47304.1| (hypothetical protein B456_008G020000 [Gossypium raimondii])

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-19
Identity = 59/84 (70.24%), Postives = 60/84 (71.43%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGYPPPPAY 60
          MSYY Q  PPVGVPPPQGYPP GYPPKDAYPP GYPPQG   GYP  GYPPQGYP     
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPPKDAYPPPGYPPQGYPQGYPQQGYPPQGYP----- 60

Query: 61 GPAYGHPPPQHQNQKKEVGFVEGW 82
           P Y  PPPQ   QK+  GFVEGW
Sbjct: 61 -PQYAQPPPQ---QKQSSGFVEGW 75

[Close]

BLAST of Lsi03G005930 vs. NCBI nr
Match: gi|643738592|gb|KDP44513.1| (hypothetical protein JCGZ_16346 [Jatropha curcas])

HSP 1 Score: 101.3 bits (251), Expect = 8.2e-19
Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGY-PPPPA 60
          MSYY Q  PPVGVPPPQGYPP GY PKDAYPP GYPPQG   GYPP GYPPQGY PPPPA
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGY-PKDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPA 60

Query: 61 YGPAYGHPPPQHQN 71
          Y P YG PPPQ Q+
Sbjct: 61 YAPQYGQPPPQQQS 73

[Close]

BLAST of Lsi03G005930 vs. NCBI nr
Match: gi|802550735|ref|XP_012093141.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jatropha curcas])

HSP 1 Score: 101.3 bits (251), Expect = 8.2e-19
Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 1


Query: 1  MSYYAQPPPPVGVPPPQGYPPAGYPPKDAYPPAGYPPQG---GYPPAGYPPQGY-PPPPA 60
          MSYY Q  PPVGVPPPQGYPP GY PKDAYPP GYPPQG   GYPP GYPPQGY PPPPA
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGY-PKDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPA 60

Query: 61 YGPAYGHPPPQHQN 71
          Y P YG PPPQ Q+
Sbjct: 61 YAPQYGQPPPQQQS 73

The following BLAST results are available for this feature:

BLAST of Lsi03G005930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	1.1e-18	67.82	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	4.1e-10	54.65	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
OPSD_LOLFO	4.5e-09	73.58	Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	4.5e-09	73.58	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]
OPSD_ENTDO	7.7e-09	62.86	Rhodopsin OS=Enteroctopus dofleini GN=RHO PE=1 SV=1	[more]

BLAST of Lsi03G005930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2W8_CUCSA	3.7e-34	95.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1	[more]
A0A0D2ST80_GOSRA	3.4e-19	70.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G020000 PE=4 SV=1	[more]
A0A067LB92_JATCU	5.7e-19	78.38	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16346 PE=4 SV=1	[more]
U5G3V1_POPTR	7.5e-19	71.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1	[more]
A0A022RH20_ERYGU	1.3e-18	72.84	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021603mg PE=4 SV=1	[more]

BLAST of Lsi03G005930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	6.0e-20	67.82	proline-rich family protein	[more]
AT3G49845.1	1.0e-11	50.00	unknown protein	[more]
AT5G67600.1	5.7e-10	55.00	unknown protein	[more]
AT5G17650.1	1.3e-09	56.72	glycine/proline-rich protein	[more]
AT5G45350.1	6.3e-09	58.21	proline-rich family protein	[more]

BLAST of Lsi03G005930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724815\|ref\|XP_011658867.1\|	5.3e-34	95.00	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659110097\|ref\|XP_008455047.1\|	5.5e-31	91.36	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|763780233\|gb\|KJB47304.1\|	4.8e-19	70.24	hypothetical protein B456_008G020000 [Gossypium raimondii]	[more]
gi\|643738592\|gb\|KDP44513.1\|	8.2e-19	78.38	hypothetical protein JCGZ_16346 [Jatropha curcas]	[more]
gi\|802550735\|ref\|XP_012093141.1\|	8.2e-19	78.38	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Jat...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G005930.1	Lsi03G005930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 40..52 score: 1.4E-5coord: 15..26 score: 1.
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..81 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G005930	Carg16322	Silver-seed gourd	carlsiB411
Lsi03G005930	CsaV3_7G007760	Cucumber (Chinese Long) v3	cuclsiB555

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G005930	Cucumber (Gy14) v2	cgyblsiB488
Lsi03G005930	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G005930	Melon (DHL92) v3.6.1	lsimedB281
Lsi03G005930	Silver-seed gourd	carlsiB342
Lsi03G005930	Silver-seed gourd	carlsiB672
Lsi03G005930	Watermelon (97103) v2	lsiwmbB226
Lsi03G005930	Wax gourd	lsiwgoB307
Lsi03G005930	Wax gourd	lsiwgoB320
Lsi03G005930	Bottle gourd (USVL1VR-Ls)	lsilsiB126
Lsi03G005930	Cucumber (Gy14) v1	cgylsiB367
Lsi03G005930	Cucurbita maxima (Rimu)	cmalsiB116
Lsi03G005930	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G005930	Cucurbita maxima (Rimu)	cmalsiB662
Lsi03G005930	Cucurbita moschata (Rifu)	cmolsiB103
Lsi03G005930	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G005930	Cucurbita moschata (Rifu)	cmolsiB650
Lsi03G005930	Cucurbita pepo (Zucchini)	cpelsiB208
Lsi03G005930	Cucurbita pepo (Zucchini)	cpelsiB543
Lsi03G005930	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G005930	Cucumber (Chinese Long) v2	culsiB522
Lsi03G005930	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G005930	Melon (DHL92) v3.5.1	lsimeB268
Lsi03G005930	Watermelon (Charleston Gray)	lsiwcgB223
Lsi03G005930	Watermelon (Charleston Gray)	lsiwcgB233
Lsi03G005930	Watermelon (97103) v1	lsiwmB245
Lsi03G005930	Watermelon (97103) v1	lsiwmB268