Carg14427 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14427
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ferredoxin-thioredoxin reductase, variable chain
Location	Cucurbita_argyrosperma_scaffold_041 : 238447 .. 238995 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTATTGCAAGCAGTGTCGGCGTGATACCATCGCCGGTGACGGCGTCAGCGTCGGCGGCCGCTCGTCCCGCCTGTTCTATTACGACGGTGTCCACTAGTGTTGATGTCAAATCGTCCTATTCCTCGTCCGTTAGTTCTCTATCGTCAGTTGTTGCTAATCCTTTCAACTGCTTGATTAGAAGAGGGAGGAGAATTTGTAGCGAGGTTACAGTCAAATCAGATTCCAGAGGTTCCTCTTCTGCTACTGTTGTTTCGGCGGCGGCGACGTCATTGTCTGAGGAGGAGACTGGCGAAGCGGCTGCTACTAGAATTGGAGCGAAAGTTAGGGTTAAGGTACCTTTGAAGGTGTATCATGTAGCGAAGTTGCCGGAGGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGCGTTTGGAAGGGGAAACACGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGGCCTCCGGTCAAATTCGTCGCTCATCTGAAGGAGGATGAATTTGAATACGTTTAA

mRNA sequence

ATGATCAGTATTGCAAGCAGTGTCGGCGTGATACCATCGCCGGTGACGGCGTCAGCGTCGGCGGCCGCTCGTCCCGCCTGTTCTATTACGACGGTGTCCACTAGTGTTGATGTCAAATCGTCCTATTCCTCGTCCGTTAGTTCTCTATCGTCAGTTGTTGCTAATCCTTTCAACTGCTTGATTAGAAGAGGGAGGAGAATTTGTAGCGAGGTTACAGTCAAATCAGATTCCAGAGGTTCCTCTTCTGCTACTGTTGTTTCGGCGGCGGCGACGTCATTGTCTGAGGAGGAGACTGGCGAAGCGGCTGCTACTAGAATTGGAGCGAAAGTTAGGGTTAAGGTACCTTTGAAGGTGTATCATGTAGCGAAGTTGCCGGAGGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGCGTTTGGAAGGGGAAACACGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGGCCTCCGGTCAAATTCGTCGCTCATCTGAAGGAGGATGAATTTGAATACGTTTAA

Coding sequence (CDS)

ATGATCAGTATTGCAAGCAGTGTCGGCGTGATACCATCGCCGGTGACGGCGTCAGCGTCGGCGGCCGCTCGTCCCGCCTGTTCTATTACGACGGTGTCCACTAGTGTTGATGTCAAATCGTCCTATTCCTCGTCCGTTAGTTCTCTATCGTCAGTTGTTGCTAATCCTTTCAACTGCTTGATTAGAAGAGGGAGGAGAATTTGTAGCGAGGTTACAGTCAAATCAGATTCCAGAGGTTCCTCTTCTGCTACTGTTGTTTCGGCGGCGGCGACGTCATTGTCTGAGGAGGAGACTGGCGAAGCGGCTGCTACTAGAATTGGAGCGAAAGTTAGGGTTAAGGTACCTTTGAAGGTGTATCATGTAGCGAAGTTGCCGGAGGCGAATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGCGTTTGGAAGGGGAAACACGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGGCCTCCGGTCAAATTCGTCGCTCATCTGAAGGAGGATGAATTTGAATACGTTTAA

Protein sequence

MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCLIRRGRRICSEVTVKSDSRGSSSATVVSAAATSLSEEETGEAAATRIGAKVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFEYV

Homology

[Close]

BLAST of Carg14427 vs. NCBI nr
Match: XP_022945181.1 (ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita moschata])

HSP 1 Score: 328.2 bits (840), Expect = 1.8e-86
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL
Sbjct: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH
Sbjct: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE
Sbjct: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180

Query: 181 YV 183
           YV
Sbjct: 181 YV 182

[Close]

BLAST of Carg14427 vs. NCBI nr
Match: XP_023523040.1 (ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.4 bits (812), Expect = 3.2e-83
Identity = 176/182 (96.70%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MISIASSVGVIPSPVTASASA ARPACS+T VSTSVDVKSSYSSSVSSLSSVVANPFN L
Sbjct: 1   MISIASSVGVIPSPVTASASAVARPACSMTMVSTSVDVKSSYSSSVSSLSSVVANPFNYL 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           IRRGRR+CSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH
Sbjct: 61  IRRGRRVCSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEANLEGMEGV+KDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE
Sbjct: 121 VAKLPEANLEGMEGVVKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180

Query: 181 YV 183
           YV
Sbjct: 181 YV 182

[Close]

BLAST of Carg14427 vs. NCBI nr
Match: XP_022967006.1 (ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 173/182 (95.05%), Postives = 177/182 (97.25%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MISIASSVGVIPSPVTASASAA+RP CS+ TV+TSVDVKSSYSSSVSSLSSVVANPFNCL
Sbjct: 1   MISIASSVGVIPSPVTASASAASRPTCSL-TVATSVDVKSSYSSSVSSLSSVVANPFNCL 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           I RGRR+CSEVTVKSDSRGSSSATVVSA  TSLSEEETGEAAATRIGAKVRVKVPLKVYH
Sbjct: 61  IGRGRRVCSEVTVKSDSRGSSSATVVSAAATSLSEEETGEAAATRIGAKVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE
Sbjct: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180

Query: 181 YV 183
           YV
Sbjct: 181 YV 181

[Close]

BLAST of Carg14427 vs. NCBI nr
Match: XP_022999561.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 145/182 (79.67%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MI++A+S+GVIP+P    A  AARPACS+ TV +S D KSSYSSSVSSLSSVV NPFNC 
Sbjct: 1   MITMANSIGVIPTP----APTAARPACSM-TVFSSTDFKSSYSSSVSSLSSVVVNPFNCS 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           I RGRR  SEVTVKSDS   SSA  VSA  TSLSE+ET EAAA RIGA+VRVKVPL VYH
Sbjct: 61  ITRGRRFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEA+LEGMEGVLKDYVRVWKGK VSANLPYKVEFVVPVEGRPPVKFVAHLKE+EFE
Sbjct: 121 VAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFE 177

Query: 181 YV 183
           YV
Sbjct: 181 YV 177

[Close]

BLAST of Carg14427 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 7.4e-56
Identity = 134/182 (73.63%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MI++A+S+GVIP+P    A  AARPACS+ TV +S D KSSYS SVSSLSSVV NPFNC 
Sbjct: 1   MITMANSIGVIPTP----APTAARPACSM-TVFSSTDFKSSYSPSVSSLSSVVVNPFNCS 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           IRRGRR  SEVTVKSDS   SSA     XX              RIGA+VRVKVPLKVYH
Sbjct: 61  IRRGRRFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXXRIGARVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEA+LEGMEGVLKDYVRVWKGK VSANLPYKVEFVVPVEGRPPVKFVAHLKE+EFE
Sbjct: 121 VAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFE 177

Query: 181 YV 183
           YV
Sbjct: 181 YV 177

[Close]

BLAST of Carg14427 vs. TAIR10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)

HSP 1 Score: 114.0 bits (284), Expect = 9.7e-26
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 110 VRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVK 169
           VRV  PLKVYHV ++PE +LEGMEG LKDYV VWKGK +SANLPYK+EF   +EGR  VK
Sbjct: 108 VRVTAPLKVYHVNRVPEVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVK 167

Query: 170 FVAHLKEDEFEYV 183
           FV+HLKEDEFE++
Sbjct: 168 FVSHLKEDEFEFI 180

[Close]

BLAST of Carg14427 vs. TAIR10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)

HSP 1 Score: 101.7 bits (252), Expect = 5.0e-22
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 116 LKVYHVAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLK 175
           LKVYHV ++PE  L GMEG +KDYV +WKGK +SANLP+KV+FV  +EGR PVKF  HLK
Sbjct: 116 LKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLK 175

Query: 176 EDEFEYV 183
           EDEFE +
Sbjct: 176 EDEFELI 182

[Close]

BLAST of Carg14427 vs. Swiss-Prot
Match: sp|P80680|FTRV_MAIZE (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-24
Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 101 AAATRIGAKVRVKVPLKVYHVAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVV 160
           AAA +IG +VRV  PL+VYHV K P+ +++GMEGV+K YV VWKGK V+AN P+KVEF +
Sbjct: 13  AAAPKIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFEL 72

Query: 161 PVEGRP-PVKFVAHLKEDEFEYV 183
            VEG+P PV+F AHL+EDEFE+V
Sbjct: 73  AVEGQPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of Carg14427 vs. Swiss-Prot
Match: sp|P38365|FTRV_SPIOL (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 7.1e-18
Identity = 55/116 (47.41%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 68  CSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYHVAKLPEA 127
           C EV +KSDS           XX     ++  E    ++G KV+VK PLKVYHV KLPE 
Sbjct: 61  CCEVALKSDSSTGFXXXXXXXXXXXXXXKKNLE----KVGCKVKVKSPLKVYHVPKLPEV 120

Query: 128 NL-EGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFEYV 183
            L   M GV+K YV  WKGK++S N P+KVE+ + V  R  VK V HLKE+EFE +
Sbjct: 121 ELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 172

[Close]

BLAST of Carg14427 vs. TrEMBL
Match: tr|A0A1S3BEI2|A0A1S3BEI2_CUCME (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.2e-55
Identity = 129/182 (70.88%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MI IA+S+G++P PV +SAS AAR ACS+T  STS DV+SS+SSSV SLSSVV NPFNC 
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTS-DVRSSFSSSVCSLSSVVVNPFNCS 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           IRRGRR+ SEV+V+SDS           XX               IGA+VRVKVPLKVYH
Sbjct: 61  IRRGRRLFSEVSVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLPEANLEGMEGVLKDYVRVWKGK VSANLPYKVEFVVPVEGRPP+KFVAHLKE+EFE
Sbjct: 121 VAKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFE 180

Query: 181 YV 183
           YV
Sbjct: 181 YV 181

[Close]

BLAST of Carg14427 vs. TrEMBL
Match: tr|A0A0A0KV36|A0A0A0KV36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 9.2e-55
Identity = 130/182 (71.43%), Postives = 143/182 (78.57%), Query Frame = 0


Query: 1   MISIASSVGVIPSPVTASASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCL 60
           MISIA+S+GVIPSP  +SAS AAR ACS+T  ST+ DVKSS+SSSV SLSS+V NPFNC 
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTA-DVKSSFSSSVCSLSSLVVNPFNCS 60

Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           IRRGRR+ SEV V+SDS           XX               IGA+VRVKVPLKVYH
Sbjct: 61  IRRGRRLFSEVPVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYH 120

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           VAKLP+ANLEGMEGV+KDYVRVWKGK VSANLPYKVEFVVPVEGRPPVKFVAHLKE+EFE
Sbjct: 121 VAKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFE 180

Query: 181 YV 183
           YV
Sbjct: 181 YV 181

[Close]

BLAST of Carg14427 vs. TrEMBL
Match: tr|A0A200QK40|A0A200QK40_9MAGN (Lipoyl synthase OS=Macleaya cordata OX=56857 GN=BVC80_645g82 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.1e-29
Identity = 82/164 (50.00%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 31  TVSTSVDVKSSYSSSVS------------SLSSVVANPFNCLIRRGRRICSEVTVKSDSR 90
           T + S+ + SS  SSVS            S++SVV+       R+ R I  EV +K DS 
Sbjct: 2   TTTASLSISSSSFSSVSIKNYSHRQQCIASINSVVSASSLRPRRQQRIISCEVALKPDSA 61

Query: 91  GSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYHVAKLPEANLEGMEGVLKD 150
            S S++ V       ++E+  E+   +IGA+VRVK+PLKVYHV K+PE +L GMEG +K 
Sbjct: 62  PSISSSAVLE-----AKEDEDESIQAKIGARVRVKIPLKVYHVPKVPEVDLTGMEGKVKQ 121

Query: 151 YVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFEYV 183
           YV +WKGKH+SANLP+K+EFV  +EGR PVKFVAHLKEDEFEY+
Sbjct: 122 YVGLWKGKHISANLPFKIEFVKDIEGRGPVKFVAHLKEDEFEYL 160

[Close]

BLAST of Carg14427 vs. TrEMBL
Match: tr|A0A2N9GEA3|A0A2N9GEA3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25581 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.1e-26
Identity = 71/122 (58.20%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 61  IRRGRRICSEVTVKSDSRGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYH 120
           +RR R I  EV +KSDS  SSS         SLS ++       +IGA+VRVKV LKV+H
Sbjct: 62  LRRSRMISCEVALKSDSTTSSS---------SLSSDD------VKIGARVRVKVALKVHH 121

Query: 121 VAKLPEANLEGMEGVLKDYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFE 180
           V K+ E +L GMEG LK YV  WKGK +SANLPYKV+FV  +EGR PVKF AHLKEDEFE
Sbjct: 122 VPKVAEVDLTGMEGELKQYVGEWKGKRISANLPYKVQFVTHIEGRGPVKFFAHLKEDEFE 168

Query: 181 YV 183
           Y+
Sbjct: 182 YL 168

[Close]

BLAST of Carg14427 vs. TrEMBL
Match: tr|A8IXL0|A8IXL0_BRACM (Lipoic acid synthase-like protein OS=Brassica campestris OX=3711 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.0e-26
Identity = 81/165 (49.09%), Postives = 102/165 (61.82%), Query Frame = 0


Query: 18  SASAAARPACSITTVSTSVDVKSSYSSSVSSLSSVVANPFNCLIRRGRRICSEVTVKSDS 77
           ++SA   P C  T       +KS  S  ++S S           R   R  S +TV+ D 
Sbjct: 6   ASSATVLPPCGPTA------LKSCISPPLASQSRTK--------RASSRRASTMTVRCDV 65

Query: 78  RGSSSATVVSAXXTSLSEEETGEAAATRIGAKVRVKVPLKVYHVAKLPEANLEGMEGVLK 137
             + +A  V+A  T LSEEE    A  ++G+ +RV  PLKVYHV ++PE +LEGMEG LK
Sbjct: 66  -ATKTADSVNAEETELSEEEM--EAKAKVGSSIRVTAPLKVYHVNRVPEVDLEGMEGKLK 125

Query: 138 DYVRVWKGKHVSANLPYKVEFVVPVEGRPPVKFVAHLKEDEFEYV 183
           DYV VWKGK +SANLPYKVEF   VEGR PVKFVAHLK+DEFE++
Sbjct: 126 DYVAVWKGKRISANLPYKVEFFKEVEGRGPVKFVAHLKDDEFEFI 153

The following BLAST results are available for this feature:

BLAST of Carg14427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945181.1	1.8e-86	100.00	ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita moschata]	[more]
XP_023523040.1	3.2e-83	96.70	ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita pepo subsp. pep...	[more]
XP_022967006.1	2.7e-82	95.05	ferredoxin-thioredoxin reductase, variable chain-like [Cucurbita maxima]	[more]
XP_022999561.1	1.5e-64	79.67	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_023549490.1	7.4e-56	73.63	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]

BLAST of Carg14427 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23440.1	9.7e-26	71.23	ferredoxin/thioredoxin reductase subunit A (variable subunit) 1	[more]
AT5G08410.1	5.0e-22	67.16	ferredoxin/thioredoxin reductase subunit A (variable subunit) 2	[more]

BLAST of Carg14427 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P80680\|FTRV_MAIZE	3.9e-24	63.86	Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1	[more]
sp\|P38365\|FTRV_SPIOL	7.1e-18	47.41	Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler...	[more]

BLAST of Carg14427 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BEI2\|A0A1S3BEI2_CUCME	9.2e-55	70.88	ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KV36\|A0A0A0KV36_CUCSA	9.2e-55	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1	[more]
tr\|A0A200QK40\|A0A200QK40_9MAGN	5.1e-29	50.00	Lipoyl synthase OS=Macleaya cordata OX=56857 GN=BVC80_645g82 PE=4 SV=1	[more]
tr\|A0A2N9GEA3\|A0A2N9GEA3_FAGSY	3.1e-26	58.20	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25581 PE=4 SV=1	[more]
tr\|A8IXL0\|A8IXL0_BRACM	4.0e-26	49.09	Lipoic acid synthase-like protein OS=Brassica campestris OX=3711 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR008990	Elect_transpt_acc-like_dom_sf
IPR004207	Fd_thioredoxin_Rdtase_alpha

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14427-RA	Carg14427-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 106..178 e-value: 2.0E-25 score: 88.6
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PRODOM	PD015034		coord: 106..182 e-value: 3.0E-26 score: 292.0
None	No IPR available	GENE3D	G3DSA:2.30.30.50		coord: 104..182 e-value: 4.5E-28 score: 98.8
None	No IPR available	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 18..182
None	No IPR available	PANTHER	PTHR10949:SF11	SUBFAMILY NOT NAMED	coord: 18..182
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	SSF50090	Electron transport accessory proteins	coord: 105..181

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14427	Cla022889	Watermelon (97103) v1	carwmB0723
Carg14427	Csa5G580660	Cucumber (Chinese Long) v2	carcuB0741
Carg14427	MELO3C011775	Melon (DHL92) v3.5.1	carmeB0718
Carg14427	ClCG11G012840	Watermelon (Charleston Gray)	carwcgB0698
Carg14427	CSPI05G20480	Wild cucumber (PI 183967)	carcpiB0757
Carg14427	Cucsa.281120	Cucumber (Gy14) v1	carcgyB0813
Carg14427	CmaCh18G008380	Cucurbita maxima (Rimu)	carcmaB1012
Carg14427	CmaCh04G012800	Cucurbita maxima (Rimu)	carcmaB1014
Carg14427	CmoCh04G013490	Cucurbita moschata (Rifu)	carcmoB0986
Carg14427	Lsi04G007630	Bottle gourd (USVL1VR-Ls)	carlsiB663
Carg14427	Cp4.1LG01g09950	Cucurbita pepo (Zucchini)	carcpeB1020
Carg14427	CsGy5G020000	Cucumber (Gy14) v2	carcgybB0719
Carg14427	MELO3C011776.2	Melon (DHL92) v3.6.1	carmedB0731
Carg14427	CsaV3_5G029240	Cucumber (Chinese Long) v3	carcucB0760
Carg14427	Cla97C11G218730	Watermelon (97103) v2	carwmbB0755
Carg14427	Bhi07G000943	Wax gourd	carwgoB0853

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14427	Carg02037	Silver-seed gourd	carcarB592

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14427	Silver-seed gourd	carcarB591
Carg14427	Cucurbita maxima (Rimu)	carcmaB1015
Carg14427	Cucurbita moschata (Rifu)	carcmoB0984
Carg14427	Cucurbita moschata (Rifu)	carcmoB0987
Carg14427	Cucurbita pepo (Zucchini)	carcpeB1017
Carg14427	Cucurbita pepo (Zucchini)	carcpeB1021
Carg14427	Bottle gourd (USVL1VR-Ls)	carlsiB662