Carg02037 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02037
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ferredoxin-thioredoxin reductase, variable chain
Location	Cucurbita_argyrosperma_scaffold_003 : 1837945 .. 1838478 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

mRNA sequence

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Coding sequence (CDS)

ATGATCACTATGGCGAACAGTATCGGCGTGATACCAACGCCGGCGCCCACGGCCGCTCGTCCTGCCTGTTCTATGACGGTATTCTCTAGTACTGATTTCAAATCGTCCTATTCCCCGTCCGTGAGTTCTCTATCGTCAGTTGTTGTTAATCCTTTCAACTGCTCGGTTACAAGAGGGAGAAGATTCTTCAGCGAAGTTACTGTCAAATCAGATTCCGGTACTTTGTCTTCAGCTGCTGCTGTTTCGGCGGCGACGACGTCATTGTCGGAGGATGAGACGGATGAAGCGGCTGCCGCTAGAATTGGAGCCAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTTGCTAAGTTACCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGATTATGTACGTGTTTGGAAGGGGAAGCGTGTATCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCAGTCGAAGGCCGTCCACCGGTCAAATTCCTAGCTCATCTTAAGGAGGAAGAATTTGAATACGTTTAA

Protein sequence

MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGRRFFSEVTVKSDSGTLSSAAAVSAATTSLSEDETDEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV

Homology

[Close]

BLAST of Carg02037 vs. NCBI nr
Match: XP_022957590.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 295.8 bits (756), Expect = 9.6e-77
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLP 120
           RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 178
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Carg02037 vs. NCBI nr
Match: XP_023549490.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCS+ RGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSIRRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLP 120
           RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXX RIGARVRVKVPLKVYHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXXRIGARVRVKVPLKVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 178
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Carg02037 vs. NCBI nr
Match: XP_022999561.1 (ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 153/177 (86.44%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSVTRGR 60
           MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYS SVSSLSSVVVNPFNCS+TRGR
Sbjct: 1   MITMANSIGVIPTPAPTAARPACSMTVFSSTDFKSSYSSSVSSLSSVVVNPFNCSITRGR 60

Query: 61  RFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLP 120
           RFFSEVTVKSDSGTLSSA                    ARIGARVRVKVPL VYHVAKLP
Sbjct: 61  RFFSEVTVKSDSGTLSSAAAVSAAMTSLSEDETDEAAAARIGARVRVKVPLNVYHVAKLP 120

Query: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 178
           EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Sbjct: 121 EADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEYV 177

[Close]

BLAST of Carg02037 vs. NCBI nr
Match: XP_004147092.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >KGN51581.1 hypothetical protein Csa_5G580660 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 150/181 (82.87%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCS+
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT    XXXXXXXXXXXXXXXXXXXX  IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 178
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of Carg02037 vs. NCBI nr
Match: XP_008445916.1 (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 148/181 (81.77%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHV 120
            RGRR FSEV+V+SDSGT    XXXXXXXXXXXXXXXXXXXX  IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 178
           AKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

[Close]

BLAST of Carg02037 vs. TAIR10
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)

HSP 1 Score: 115.2 bits (287), Expect = 4.2e-26
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 105 VRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVK 164
           VRV  PLKVYHV ++PE DLEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VK
Sbjct: 108 VRVTAPLKVYHVNRVPEVDLEGMEGKLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVK 167

Query: 165 FLAHLKEEEFEYV 178
           F++HLKE+EFE++
Sbjct: 168 FVSHLKEDEFEFI 180

[Close]

BLAST of Carg02037 vs. TAIR10
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-22
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 111 LKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLK 170
           LKVYHV ++PE +L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLK
Sbjct: 116 LKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLK 175

Query: 171 EEEFEYV 178
           E+EFE +
Sbjct: 176 EDEFELI 182

[Close]

BLAST of Carg02037 vs. Swiss-Prot
Match: sp|P80680|FTRV_MAIZE (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 52/79 (65.82%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 100 RIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEG 159
           +IG RVRV  PL+VYHV K P+ D++GMEGV+K YV VWKGKRV+AN P+KVEF + VEG
Sbjct: 17  KIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFELAVEG 76

Query: 160 RP-PVKFLAHLKEEEFEYV 178
           +P PV+F AHL+E+EFE+V
Sbjct: 77  QPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of Carg02037 vs. Swiss-Prot
Match: sp|P38365|FTRV_SPIOL (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRV PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 9.0e-18
Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 100 RIGARVRVKVPLKVYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVE 159
           ++G +V+VK PLKVYHV KLPE +L   M GV+K YV  WKGK +S N P+KVE+ + V 
Sbjct: 94  KVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVP 153

Query: 160 GRPPVKFLAHLKEEEFEYV 178
            R  VK + HLKEEEFE +
Sbjct: 154 DRGSVKLVVHLKEEEFEII 172

[Close]

BLAST of Carg02037 vs. Swiss-Prot
Match: sp|Q55781|FTRV_SYNY3 (Ferredoxin-thioredoxin reductase, variable chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ftrV PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 7.4e-04
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 101 IGARVRVKVPLKVYH--VAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVE 160
           +G RVRV   + VYH    K    DL+GMEG +   +  W+G+ +SANLP  V+F     
Sbjct: 3   VGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKF----- 62

Query: 161 GRPPVKFLAHLKEEE 174
                +F AH + +E
Sbjct: 63  ---EQRFKAHFRPDE 69

[Close]

BLAST of Carg02037 vs. TrEMBL
Match: tr|A0A0A0KV36|A0A0A0KV36_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 150/181 (82.87%), Postives = 163/181 (90.06%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI++ANSIGVIP+PAP+    AAR ACSMTVFS+ D KSS+S SV SLSS+VVNPFNCS+
Sbjct: 1   MISIANSIGVIPSPAPSSASMAARFACSMTVFSTADVKSSFSSSVCSLSSLVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHV 120
            RGRR FSEV V+SDSGT    XXXXXXXXXXXXXXXXXXXX  IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVPVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 178
           AKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEY
Sbjct: 121 AKLPDANLEGMEGVVKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFVAHLKEEEFEY 180

[Close]

BLAST of Carg02037 vs. TrEMBL
Match: tr|A0A1S3BEI2|A0A1S3BEI2_CUCME (ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC103488798 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 7.1e-60
Identity = 148/181 (81.77%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   MITMANSIGVIPTPAPT----AARPACSMTVFSSTDFKSSYSPSVSSLSSVVVNPFNCSV 60
           MI +ANSIG++P P P+    AAR ACSMTVFS++D +SS+S SV SLSSVVVNPFNCS+
Sbjct: 1   MIGIANSIGLMPPPVPSSASVAARFACSMTVFSTSDVRSSFSSSVCSLSSVVVNPFNCSI 60

Query: 61  TRGRRFFSEVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHV 120
            RGRR FSEV+V+SDSGT    XXXXXXXXXXXXXXXXXXXX  IGARVRVKVPLKVYHV
Sbjct: 61  RRGRRLFSEVSVRSDSGTXXXXXXXXXXXXXXXXXXXXXXXXXXIGARVRVKVPLKVYHV 120

Query: 121 AKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEY 178
           AKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEY
Sbjct: 121 AKLPEANLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPIKFVAHLKEEEFEY 180

[Close]

BLAST of Carg02037 vs. TrEMBL
Match: tr|A0A2I4FXT9|A0A2I4FXT9_9ROSI (ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Juglans regia OX=51240 GN=LOC109002985 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.3e-28
Identity = 81/185 (43.78%), Postives = 114/185 (61.62%), Query Frame = 0


Query: 5   ANSIGVIPTPAPTAAR-------PACSMTVFSSTDFKSSYSPSVSSLSSVV----VNPFN 64
           + S+  +P+   T  R       PA +  + SST + SS + +  ++S+ V      P +
Sbjct: 22  SRSLSSLPSTVHTTGRTGNHCTKPATTTNMKSSTPWCSSMNVTSLAVSAAVSPGITAPQH 81

Query: 65  CSVTRGRRFFS-EVTVKSDSGTLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLK 124
            ++ R +R  S E++++SDS T++ A                    A+IGARVRVKVPLK
Sbjct: 82  LNIRRRKRTISCEISLESDSTTVTRA----------------SSEEAKIGARVRVKVPLK 141

Query: 125 VYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEE 178
           V+HV +LPE DL GMEG LK YV +WKG+R+SANLPYKVEF+  ++GR PVKF AHLKE+
Sbjct: 142 VHHVPRLPEVDLTGMEGELKQYVGLWKGRRISANLPYKVEFLTEIQGRGPVKFFAHLKED 190

[Close]

BLAST of Carg02037 vs. TrEMBL
Match: tr|A0A200QK40|A0A200QK40_9MAGN (Lipoyl synthase OS=Macleaya cordata OX=56857 GN=BVC80_645g82 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-26
Identity = 78/164 (47.56%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 17  TAARPACSMTVFSSTDFKSSYSPSVSSLSSV--VVNPFNCSVTRGRRFFS-EVTVKSDSG 76
           T A  + S + FSS   K +YS     ++S+  VV+  +    R +R  S EV +K DS 
Sbjct: 3   TTASLSISSSSFSSVSIK-NYSHRQQCIASINSVVSASSLRPRRQQRIISCEVALKPDSA 62

Query: 77  TLSSAXXXXXXXXXXXXXXXXXXXXARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKD 136
              S+                    A+IGARVRVK+PLKVYHV K+PE DL GMEG +K 
Sbjct: 63  PSISS-----SAVLEAKEDEDESIQAKIGARVRVKIPLKVYHVPKVPEVDLTGMEGKVKQ 122

Query: 137 YVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFLAHLKEEEFEYV 178
           YV +WKGK +SANLP+K+EFV  +EGR PVKF+AHLKE+EFEY+
Sbjct: 123 YVGLWKGKHISANLPFKIEFVKDIEGRGPVKFVAHLKEDEFEYL 160

[Close]

BLAST of Carg02037 vs. TrEMBL
Match: tr|A0A2P2IS21|A0A2P2IS21_RHIMU (Uncharacterized protein MANES_16G040000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-26
Identity = 59/77 (76.62%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 101 IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGR 160
           IGARVRVK PLKVYHV ++PE DL G+EG LK YV +WKGKR+SANLPYKVEFVV ++GR
Sbjct: 187 IGARVRVKAPLKVYHVPRVPEVDLTGLEGHLKQYVGLWKGKRISANLPYKVEFVVDIQGR 246

Query: 161 PPVKFLAHLKEEEFEYV 178
            PVKFLAHLKE+EFEY+
Sbjct: 247 GPVKFLAHLKEDEFEYL 263

The following BLAST results are available for this feature:

BLAST of Carg02037 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957590.1	9.6e-77	98.87	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_023549490.1	1.8e-75	97.74	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_022999561.1	3.1e-75	86.44	ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita ...	[more]
XP_004147092.1	1.7e-60	82.87	PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus] >K...	[more]
XP_008445916.1	1.1e-59	81.77	PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]	[more]

BLAST of Carg02037 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23440.1	4.2e-26	71.23	ferredoxin/thioredoxin reductase subunit A (variable subunit) 1	[more]
AT5G08410.1	3.7e-22	65.67	ferredoxin/thioredoxin reductase subunit A (variable subunit) 2	[more]

BLAST of Carg02037 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P80680\|FTRV_MAIZE	2.9e-24	65.82	Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays OX=4577 PE=1 SV=1	[more]
sp\|P38365\|FTRV_SPIOL	9.0e-18	55.70	Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oler...	[more]
sp\|Q55781\|FTRV_SYNY3	7.4e-04	37.33	Ferredoxin-thioredoxin reductase, variable chain OS=Synechocystis sp. (strain PC...	[more]

BLAST of Carg02037 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KV36\|A0A0A0KV36_CUCSA	1.1e-60	82.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G580660 PE=4 SV=1	[more]
tr\|A0A1S3BEI2\|A0A1S3BEI2_CUCME	7.1e-60	81.77	ferredoxin-thioredoxin reductase, variable chain OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A2I4FXT9\|A0A2I4FXT9_9ROSI	9.3e-28	43.78	ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Juglans regia...	[more]
tr\|A0A200QK40\|A0A200QK40_9MAGN	1.8e-26	47.56	Lipoyl synthase OS=Macleaya cordata OX=56857 GN=BVC80_645g82 PE=4 SV=1	[more]
tr\|A0A2P2IS21\|A0A2P2IS21_RHIMU	2.3e-26	76.62	Uncharacterized protein MANES_16G040000 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR008990	Elect_transpt_acc-like_dom_sf
IPR004207	Fd_thioredoxin_Rdtase_alpha

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02037-RA	Carg02037-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.30.30.50		coord: 99..177 e-value: 4.1E-29 score: 102.1
None	No IPR available	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 17..177
None	No IPR available	PANTHER	PTHR10949:SF11	SUBFAMILY NOT NAMED	coord: 17..177
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 101..173 e-value: 1.6E-26 score: 92.1
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PRODOM	PD015034		coord: 110..177 e-value: 1.0E-23 score: 269.0
IPR008990	Electron transport accessory-like domain superfamily	SUPERFAMILY	SSF50090	Electron transport accessory proteins	coord: 100..176

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02037	Cla022889	Watermelon (97103) v1	carwmB0845
Carg02037	Csa5G580660	Cucumber (Chinese Long) v2	carcuB0861
Carg02037	MELO3C011775	Melon (DHL92) v3.5.1	carmeB0832
Carg02037	ClCG11G012840	Watermelon (Charleston Gray)	carwcgB0810
Carg02037	CSPI05G20480	Wild cucumber (PI 183967)	carcpiB0881
Carg02037	Cucsa.281120	Cucumber (Gy14) v1	carcgyB0964
Carg02037	CmaCh04G012800	Cucurbita maxima (Rimu)	carcmaB1170
Carg02037	CmaCh18G008380	Cucurbita maxima (Rimu)	carcmaB1166
Carg02037	CmoCh04G013490	Cucurbita moschata (Rifu)	carcmoB1138
Carg02037	Lsi04G007630	Bottle gourd (USVL1VR-Ls)	carlsiB765
Carg02037	Cp4.1LG01g09950	Cucurbita pepo (Zucchini)	carcpeB1177
Carg02037	CsGy5G020000	Cucumber (Gy14) v2	carcgybB0834
Carg02037	CsaV3_5G029240	Cucumber (Chinese Long) v3	carcucB0885
Carg02037	Cla97C11G218730	Watermelon (97103) v2	carwmbB0873
Carg02037	Bhi07G000943	Wax gourd	carwgoB0984

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02037	Carg14427	Silver-seed gourd	carcarB592

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02037	Silver-seed gourd	carcarB591
Carg02037	Cucurbita maxima (Rimu)	carcmaB1167
Carg02037	Cucurbita moschata (Rifu)	carcmoB1134
Carg02037	Cucurbita moschata (Rifu)	carcmoB1135
Carg02037	Cucurbita pepo (Zucchini)	carcpeB1169
Carg02037	Cucurbita pepo (Zucchini)	carcpeB1172
Carg02037	Melon (DHL92) v3.6.1	carmedB0844