CSPI06G32630 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI06G32630
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 27421175 .. 27421677 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCATCAGTTTATTCAATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG

mRNA sequence

ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG

Coding sequence (CDS)

ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG
Homology
[Close]
BLAST of CSPI06G32630 vs. TrEMBL
Match: A0A0A0KH39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510330 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.7e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
           VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120

Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 162
           EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

[Close]
BLAST of CSPI06G32630 vs. NCBI nr
Match: gi|700193811|gb|KGN49015.1| (hypothetical protein Csa_6G510330 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 6.8e-89
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
           VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120

Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 162
           EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

[Close]
BLAST of CSPI06G32630 vs. NCBI nr
Match: gi|1009111379|ref|XP_015900776.1| (PREDICTED: uncharacterized protein LOC107433898 [Ziziphus jujuba])

HSP 1 Score: 72.4 bits (176), Expect = 8.2e-10
Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = 1 

Query: 57  LSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPW 116
           L+ GVFDFPWLKDG++ SKS++W+FEDVF + +   +ST   +T +T    F        
Sbjct: 58  LAVGVFDFPWLKDGVV-SKSEEWRFEDVFSSPLDETSSTTTSST-ITTSAGF-------- 117

Query: 117 EKDYEAQAPPPPPPSL-----DGGEQGGEAMDCIWRSVLNQPLQQ 157
           E ++  Q     P +L     +   +  E++DCIW S+LNQPLQQ
Sbjct: 118 EFEFSGQCLCQSPEALLDFPEEDKFEETESVDCIWSSLLNQPLQQ 152

[Close]
BLAST of CSPI06G32630 vs. NCBI nr
Match: gi|719990499|ref|XP_010252975.1| (PREDICTED: uncharacterized protein LOC104594382 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 1 

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MER + KR R+            ++ +  ++   K++H     ++S      D     FG
Sbjct: 29  MERDSKKRRRDDDD---------EEKTDWDVCMKKQEHVGVGFEDSDIFKVSD-PFRPFG 88

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIG-------TAFTEFLP 120
           VFDFPWLKD L+  +S+DWKF+DVF  S+  G  +  +   +  G        A  E LP
Sbjct: 89  VFDFPWLKDNLVL-ESEDWKFDDVFSASL--GDVSVSVGGGVDFGGQCLCQTPALVEILP 148

Query: 121 DPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSS 160
                D E+         +DGG       DCIW SVL+QPL  G S
Sbjct: 149 GD-TLDEESWPCEGGMNDIDGG-------DCIWSSVLSQPLSTGFS 173

[Close]
BLAST of CSPI06G32630 vs. NCBI nr
Match: gi|719990508|ref|XP_010252978.1| (PREDICTED: uncharacterized protein LOC104594382 isoform X4 [Nelumbo nucifera])

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 1 

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MER + KR R+            ++ +  ++   K++H     ++S      D     FG
Sbjct: 1   MERDSKKRRRDDDD---------EEKTDWDVCMKKQEHVGVGFEDSDIFKVSD-PFRPFG 60

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIG-------TAFTEFLP 120
           VFDFPWLKD L+  +S+DWKF+DVF  S+  G  +  +   +  G        A  E LP
Sbjct: 61  VFDFPWLKDNLVL-ESEDWKFDDVFSASL--GDVSVSVGGGVDFGGQCLCQTPALVEILP 120

Query: 121 DPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSS 160
                D E+         +DGG       DCIW SVL+QPL  G S
Sbjct: 121 GD-TLDEESWPCEGGMNDIDGG-------DCIWSSVLSQPLSTGFS 145

[Close]
BLAST of CSPI06G32630 vs. NCBI nr
Match: gi|719990505|ref|XP_010252977.1| (PREDICTED: uncharacterized protein LOC104594382 isoform X3 [Nelumbo nucifera])

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 1 

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MER + KR R+            ++ +  ++   K++H     ++S      D     FG
Sbjct: 8   MERDSKKRRRDDDD---------EEKTDWDVCMKKQEHVGVGFEDSDIFKVSD-PFRPFG 67

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIG-------TAFTEFLP 120
           VFDFPWLKD L+  +S+DWKF+DVF  S+  G  +  +   +  G        A  E LP
Sbjct: 68  VFDFPWLKDNLVL-ESEDWKFDDVFSASL--GDVSVSVGGGVDFGGQCLCQTPALVEILP 127

Query: 121 DPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSS 160
                D E+         +DGG       DCIW SVL+QPL  G S
Sbjct: 128 GD-TLDEESWPCEGGMNDIDGG-------DCIWSSVLSQPLSTGFS 152

The following BLAST results are available for this feature:
BLAST of CSPI06G32630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI06G32630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH39_CUCSA4.7e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G510330 PE=4 SV=1[more]
BLAST of CSPI06G32630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI06G32630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193811|gb|KGN49015.1|6.8e-89100.00hypothetical protein Csa_6G510330 [Cucumis sativus][more]
gi|1009111379|ref|XP_015900776.1|8.2e-1040.95PREDICTED: uncharacterized protein LOC107433898 [Ziziphus jujuba][more]
gi|719990499|ref|XP_010252975.1|1.9e-0632.53PREDICTED: uncharacterized protein LOC104594382 isoform X1 [Nelumbo nucifera][more]
gi|719990508|ref|XP_010252978.1|1.9e-0632.53PREDICTED: uncharacterized protein LOC104594382 isoform X4 [Nelumbo nucifera][more]
gi|719990505|ref|XP_010252977.1|1.9e-0632.53PREDICTED: uncharacterized protein LOC104594382 isoform X3 [Nelumbo nucifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G32630.1CSPI06G32630.1mRNA