CSPI01G05240 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCGAAATGTTCTGTTCTTGTTATAACTTATACCCGAAGATGTGTTCCTCCCTGCGTCCAGCTTTGTGGGTTACTTATGATGGACATGATTTAATTCTGTTTGGTGTTGTGCAGATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGGTAATTTGTAATATTTATTGCAACTCAGTTCTTGTCCATTCTATTGTTGATCACGGAAGGAGATGGCATGGATAACCTTTGATATATCATAACTACCTTGACTTTTTGCCTCAAATTTGATGGATCATAAGAACTTTACAAAATTTCAACTTTGCAATGTGATAAGAAATTATGTGTCCTTGCTAATTTAAATTTATTTTTTACAAATACTAACTAAAATAGAAATAGTAGTAGGAATCTATTTTAAGCAATAAGTTATACCAAACTTCCATCTCAGTGTTTTTCTCTTACCTTGCTGATCTTTACATGATGACTTTTTAAAATTTAAAGTTTTTAAGTTTTACACAAGGTTATGCAATTATATCATCATCTTAGTTACCTTATGGTAACTGGCACTTGGCAAGTCTTCTTGTGTATTGTACTTGTTTATTTGTTTTTCATGTCATAATCTTTCTATTATCTCTCCAATGAAATTCGCTACAGACATTACCTTTATTCCATTTGTTGAATTCTTATTTTCAAACAATTGCCCTTGACAATAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGGTAACTTTTCTTAGACAATGTATTGTACTTGATTTTTATTGGTTTACATTCTTGGATAGCTCTTAACTAATTTTGTAAAAAAAATAATTCTGTCCAGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAGTATGTATCTCTGCACCATGTTGTAAATCTTATAACACGATTGTCTTCTTTCCATTGCTTGAATATAATTTGACATACTGGACAACCATCGAAGGTCTTTGGGAGTAGTTATATACTTCTTTGAGAGAATGTTTTCTTGTTTTGGGCAATTGGATCGTGGCTATAGAAAAATAATGTTCTATTTGTTTAAATTGTGAGATCTTGTTGGTTTTAAGTGGATTTTATTAGTTTTCATTGTAACTATTCATGGAACCTGCTACTCTTACCAACCTTCAATGGATTACCGTTAGAAATCATCTGGTTGTCTTTCATTCTAATTTTTATTTTGTTATTTCGAAATTCTAAGTATTTGTATGTTTCCCAACTTCAGAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTACGTTAGTTATCTCTCGAGTTATGTTTTATTGTTAGGAGCATTCCGTTGGTTTGAACTTCAAAATAATGCTTCTTGTTCTACTATCCTCAGGTCCAGATAACTTGGACAACTTGCGTAAATTGGCTGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTCGAAGCTCCCGCAGAAGAAAATCGTTCTTCTTAGATAGATCCTTTTGAAAGAGAGGAGTGTTGTTTTTATGCCGTTTTATACTTTCCTAGAGTTGCTTCAGACAAGTTTTTATGATTTCGATAATTCTTAATCTTATCATAATTTAACTTGTTCTCTTTATGAGATGAGGATCGGTACTTATGTGTTTGTTCAATTCCCTGCCATACTCTTTAATCATCCCATCATCCTTTCATTCCTCCGGTAATACACAACAAAAGTTGCGGAGCTTAGCTTCTCCCTCATGACTTATGCTGTCCATCATTACTATTCTTGGTAATTCTTCTTGACGTTAAAATTATATAAAAAAAATCGTAATTTACCAGTGC ATGTTCTGTTCTTGTTATAACTTATACCCGAAGATGTGTTCCTCCCTGCGTCCAGCTTTGTGGGTTACTTATGATGGACATGATTTAATTCTGTTTGGTGTTGTGCAGATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTCCAGATAACTTGGACAACTTGCGTAAATTGGCTGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTCGAAGCTCCCGCAGAAGAAAATCGTTCTTCTTAG ATGTTCTGTTCTTGTTATAACTTATACCCGAAGATGTGTTCCTCCCTGCGTCCAGCTTTGTGGGTTACTTATGATGGACATGATTTAATTCTGTTTGGTGTTGTGCAGATGGATCAGGAGAGGCTTAGAAAGATTGCCAGTGCCGTTCGCACTGGTGGAAAGGGTACTGTGAGAAGAAAGAAGAAGGCAGTTCATAAGACCACTACAACTGATGACAAAAGGCTCCAGAGTACTTTAAAGAGAATTGGGGTGAATGCCATTCCTGCTATTGAGGAGGTCAACATTTTCAAGGATGATGTGGTTATCCAATTCAACAACCCAAAGGTTCAAGCATCTATTGCTGCAAACACGTGGGTCGTTAGTGGTTCTCCTCAAACAAAGAAATTGCAGGATATCTTGCCTGGTATCATCAATCAATTGGGTCCAGATAACTTGGACAACTTGCGTAAATTGGCTGAACAGTTTAAACAGCAAGTACCTGGAGCTGGTGGTGATCCAAAGAATGCACAAGAGGAGGATGATGATGTTCCGGAACTTGTTGAGGGTGAGACTTTCGAAGCTCCCGCAGAAGAAAATCGTTCTTCTTAG
BLAST of CSPI01G05240 vs. Swiss-Prot
Match: BTF3L_ARATH (Nascent polypeptide-associated complex subunit beta OS=Arabidopsis thaliana GN=At1g73230 PE=2 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 4.5e-64 Identity = 129/157 (82.17%), Postives = 142/157 (90.45%), Query Frame = 1
BLAST of CSPI01G05240 vs. Swiss-Prot
Match: BTF3_ARATH (Basic transcription factor 3 OS=Arabidopsis thaliana GN=BTF3 PE=1 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 5.1e-60 Identity = 125/157 (79.62%), Postives = 138/157 (87.90%), Query Frame = 1
BLAST of CSPI01G05240 vs. Swiss-Prot
Match: BT3L4_XENTR (Transcription factor BTF3 homolog 4 OS=Xenopus tropicalis GN=btf3l4 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-39 Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of CSPI01G05240 vs. Swiss-Prot
Match: BT3L4_XENLA (Transcription factor BTF3 homolog 4 OS=Xenopus laevis GN=btf3l4 PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-39 Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 1
BLAST of CSPI01G05240 vs. Swiss-Prot
Match: BT3L4_HUMAN (Transcription factor BTF3 homolog 4 OS=Homo sapiens GN=BTF3L4 PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-39 Identity = 86/147 (58.50%), Postives = 113/147 (76.87%), Query Frame = 1
BLAST of CSPI01G05240 vs. TrEMBL
Match: A0A0A0LPY4_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G031860 PE=3 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-82 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of CSPI01G05240 vs. TrEMBL
Match: A0A0A0LTU8_CUCSA (Nascent polypeptide-associated complex subunit beta OS=Cucumis sativus GN=Csa_1G043055 PE=3 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.3e-65 Identity = 133/163 (81.60%), Postives = 146/163 (89.57%), Query Frame = 1
BLAST of CSPI01G05240 vs. TrEMBL
Match: A0A061F327_THECC (Nascent polypeptide-associated complex subunit beta OS=Theobroma cacao GN=TCM_024222 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 6.9e-64 Identity = 134/160 (83.75%), Postives = 146/160 (91.25%), Query Frame = 1
BLAST of CSPI01G05240 vs. TrEMBL
Match: D7TXR6_VITVI (Nascent polypeptide-associated complex subunit beta OS=Vitis vinifera GN=VIT_17s0053g00620 PE=3 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 9.1e-64 Identity = 132/160 (82.50%), Postives = 146/160 (91.25%), Query Frame = 1
BLAST of CSPI01G05240 vs. TrEMBL
Match: A0A059A4Q1_EUCGR (Nascent polypeptide-associated complex subunit beta OS=Eucalyptus grandis GN=EUGRSUZ_K02308 PE=3 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.2e-63 Identity = 135/162 (83.33%), Postives = 147/162 (90.74%), Query Frame = 1
BLAST of CSPI01G05240 vs. TAIR10
Match: AT1G73230.1 (AT1G73230.1 Nascent polypeptide-associated complex NAC) HSP 1 Score: 245.4 bits (625), Expect = 2.5e-65 Identity = 129/157 (82.17%), Postives = 142/157 (90.45%), Query Frame = 1
BLAST of CSPI01G05240 vs. TAIR10
Match: AT1G17880.1 (AT1G17880.1 basic transcription factor 3) HSP 1 Score: 231.9 bits (590), Expect = 2.9e-61 Identity = 125/157 (79.62%), Postives = 138/157 (87.90%), Query Frame = 1
BLAST of CSPI01G05240 vs. NCBI nr
Match: gi|449439237|ref|XP_004137393.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of CSPI01G05240 vs. NCBI nr
Match: gi|659066313|ref|XP_008438287.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 309.3 bits (791), Expect = 4.0e-81 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of CSPI01G05240 vs. NCBI nr
Match: gi|449439239|ref|XP_004137394.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 3.4e-80 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of CSPI01G05240 vs. NCBI nr
Match: gi|659066315|ref|XP_008438373.1| (PREDICTED: transcription factor BTF3 homolog 4-like isoform X2 [Cucumis melo]) HSP 1 Score: 302.0 bits (772), Expect = 6.4e-79 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 1
BLAST of CSPI01G05240 vs. NCBI nr
Match: gi|659066946|ref|XP_008467234.1| (PREDICTED: transcription factor BTF3 homolog 4-like [Cucumis melo]) HSP 1 Score: 255.8 bits (652), Expect = 5.3e-65 Identity = 134/165 (81.21%), Postives = 147/165 (89.09%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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