Bhi08G001091 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G001091
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr8 : 39985823 .. 39986376 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGCAGTCGCCTGATTCAAAATCGGATTGCGCTTTTCCCATTTCCCCACCCAATTTCCATCTTCCCTCCCTTCTTACGTCTCATACTCCTAATTCTCTTCCCCTCTCTCTCTCTTATATAATCCCCTCAGCCGCTGAAACCTTTCTCCGCCGAACATCATTTCAAACGATTCTTCGATATAGGGTTTTTCTTTTAATGTTTCTGGAGATGGAGATCAATTGGAAGCAGAGCAATTCCGAGAACACAGAGAGCAATAGTATGGAGAAGATCGGAGCTCCGTTTCCTGTTCATAGCCAGGTGAGGAAGATCAAGGAGGAATCAGAGACGATCATCGATTGGCGACCTGGACAGCCGGAGATCAGACCGCCGACCACCGTCTTTCGCCAGATCTCTCGCTCGCCACTCGGAATTTCCGGCCGCCCGATTTCGGTAGGGGAATCGTAGAGGGAAATTATTGCCGGTAGAGAGACTTTAGGGCTTATTTTCTCTTCTCTTTTTCTAAAGATTCAGATAGCCCTAGTTATGTACCCTTTTTTTTTTTTGTAAATATAT

mRNA sequence

AAAAGCAGTCGCCTGATTCAAAATCGGATTGCGCTTTTCCCATTTCCCCACCCAATTTCCATCTTCCCTCCCTTCTTACGTCTCATACTCCTAATTCTCTTCCCCTCTCTCTCTCTTATATAATCCCCTCAGCCGCTGAAACCTTTCTCCGCCGAACATCATTTCAAACGATTCTTCGATATAGGGTTTTTCTTTTAATGTTTCTGGAGATGGAGATCAATTGGAAGCAGAGCAATTCCGAGAACACAGAGAGCAATAGTATGGAGAAGATCGGAGCTCCGTTTCCTGTTCATAGCCAGGTGAGGAAGATCAAGGAGGAATCAGAGACGATCATCGATTGGCGACCTGGACAGCCGGAGATCAGACCGCCGACCACCGTCTTTCGCCAGATCTCTCGCTCGCCACTCGGAATTTCCGGCCGCCCGATTTCGGTAGGGGAATCGTAGAGGGAAATTATTGCCGGTAGAGAGACTTTAGGGCTTATTTTCTCTTCTCTTTTTCTAAAGATTCAGATAGCCCTAGTTATGTACCCTTTTTTTTTTTTGTAAATATAT

Coding sequence (CDS)

ATGTTTCTGGAGATGGAGATCAATTGGAAGCAGAGCAATTCCGAGAACACAGAGAGCAATAGTATGGAGAAGATCGGAGCTCCGTTTCCTGTTCATAGCCAGGTGAGGAAGATCAAGGAGGAATCAGAGACGATCATCGATTGGCGACCTGGACAGCCGGAGATCAGACCGCCGACCACCGTCTTTCGCCAGATCTCTCGCTCGCCACTCGGAATTTCCGGCCGCCCGATTTCGGTAGGGGAATCGTAG

Protein sequence

MFLEMEINWKQSNSENTESNSMEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTTVFRQISRSPLGISGRPISVGES

Homology

[Close]

BLAST of Bhi08G001091 vs. TrEMBL
Match: tr|A0A0A0LQJ2|A0A0A0LQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042955 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 14 SENTESNSMEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTTVFRQISRSPLGIS 73
          S+  E+NSMEKI APFPVHSQVRKIKEES+T IDWRPGQPEIRPPT  FRQISRSPLGIS
Sbjct: 5  SDIRETNSMEKIEAPFPVHSQVRKIKEESDTTIDWRPGQPEIRPPTASFRQISRSPLGIS 64

Query: 74 GRPISVGES 83
          GRPISVG+S
Sbjct: 65 GRPISVGDS 73

[Close]

BLAST of Bhi08G001091 vs. TrEMBL
Match: tr|A0A0B2SM01|A0A0B2SM01_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_041948 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-13
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 15 ENTESNSMEKIGAP-FPVHSQVRKIKEESETIIDWRPGQPEIRPP-TTVFRQISRSPLGI 74
          EN + N  E+      P+HSQV KI++ESE I+DW PG+PEIRP    + RQISRSPLGI
Sbjct: 2  ENMKMNKDERFAQKGVPIHSQVMKIRQESEKIVDWSPGKPEIRPVLREISRQISRSPLGI 61

Query: 75 SGRPISVGES 83
          SGRPISVGES
Sbjct: 62 SGRPISVGES 71

[Close]

BLAST of Bhi08G001091 vs. TrEMBL
Match: tr|A0A2P6P1Q5|A0A2P6P1Q5_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0178031 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-13
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 10 KQSNSENTESNSMEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRP-----PTTVFRQ 69
          K++++ N +    E++G   PVHSQVRKIK+ESE +ID  PG+PE+RP       T  RQ
Sbjct: 5  KRNSNNNRDMEGFEEMGV--PVHSQVRKIKQESEKVIDRLPGKPEMRPVLREITVTTTRQ 64

Query: 70 ISRSPLGISGRPISVGES 83
          +SRSPLGISGRPISVG+S
Sbjct: 65 LSRSPLGISGRPISVGDS 80

[Close]

BLAST of Bhi08G001091 vs. TrEMBL
Match: tr|A0A151R370|A0A151R370_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_041930 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.7e-13
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 22 MEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTTVF---RQISRSPLGISGRPIS 81
          M+  G   P+HSQVRKIK+ESE IIDW PG+PE+RP        R ISRSPLGISG+PIS
Sbjct: 7  MKDEGKGVPIHSQVRKIKQESEKIIDWSPGKPEVRPVLREIGRDRPISRSPLGISGQPIS 66

Query: 82 VGES 83
          VGES
Sbjct: 67 VGES 70

[Close]

BLAST of Bhi08G001091 vs. TrEMBL
Match: tr|A0A0B2SH40|A0A0B2SH40_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_027713 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 15 ENTESNSMEKIGAP-FPVHSQVRKIKEESETIIDWRPGQPEIRPP-TTVFRQISRSPLGI 74
          EN + N+ E+      PVHSQV KIK+ESE I+DW PG+PEIR     + RQISRSPLGI
Sbjct: 2  ENMKMNNDERFAQKGVPVHSQVMKIKQESEKIVDWSPGKPEIRSVLREISRQISRSPLGI 61

Query: 75 SGRPISVGES 83
          SG+PISVGES
Sbjct: 62 SGQPISVGES 71

[Close]

BLAST of Bhi08G001091 vs. NCBI nr
Match: KGN64190.1 (hypothetical protein Csa_1G042955 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 14 SENTESNSMEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTTVFRQISRSPLGIS 73
          S+  E+NSMEKI APFPVHSQVRKIKEES+T IDWRPGQPEIRPPT  FRQISRSPLGIS
Sbjct: 5  SDIRETNSMEKIEAPFPVHSQVRKIKEESDTTIDWRPGQPEIRPPTASFRQISRSPLGIS 64

Query: 74 GRPISVGES 83
          GRPISVG+S
Sbjct: 65 GRPISVGDS 73

[Close]

BLAST of Bhi08G001091 vs. NCBI nr
Match: PQQ15457.1 (hypothetical protein Pyn_28850 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-13
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 0


Query: 29 FPVHSQVRKIKEESETIIDWRPGQPEIRP---PTTVFRQISRSPLGISGRPISVGES 83
          FPVHSQVRKIK+ESE IIDW PG+PE+RP     T+ RQISRSPLGIS RPISVG+S
Sbjct: 3  FPVHSQVRKIKQESEKIIDWLPGKPEMRPVLGEITMTRQISRSPLGISCRPISVGDS 59

[Close]

BLAST of Bhi08G001091 vs. NCBI nr
Match: NP_001342481.1 (uncharacterized protein LOC111138524 [Glycine max] >KHN45262.1 hypothetical protein glysoja_041948 [Glycine soja])

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-13
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 15 ENTESNSMEKIGAP-FPVHSQVRKIKEESETIIDWRPGQPEIRPP-TTVFRQISRSPLGI 74
          EN + N  E+      P+HSQV KI++ESE I+DW PG+PEIRP    + RQISRSPLGI
Sbjct: 2  ENMKMNKDERFAQKGVPIHSQVMKIRQESEKIVDWSPGKPEIRPVLREISRQISRSPLGI 61

Query: 75 SGRPISVGES 83
          SGRPISVGES
Sbjct: 62 SGRPISVGES 71

[Close]

BLAST of Bhi08G001091 vs. NCBI nr
Match: PRQ15864.1 (hypothetical protein RchiOBHm_Chr7g0178031 [Rosa chinensis])

HSP 1 Score: 82.4 bits (202), Expect = 7.8e-13
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 10 KQSNSENTESNSMEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRP-----PTTVFRQ 69
          K++++ N +    E++G   PVHSQVRKIK+ESE +ID  PG+PE+RP       T  RQ
Sbjct: 5  KRNSNNNRDMEGFEEMGV--PVHSQVRKIKQESEKVIDRLPGKPEMRPVLREITVTTTRQ 64

Query: 70 ISRSPLGISGRPISVGES 83
          +SRSPLGISGRPISVG+S
Sbjct: 65 LSRSPLGISGRPISVGDS 80

[Close]

BLAST of Bhi08G001091 vs. NCBI nr
Match: XP_020205234.1 (uncharacterized protein LOC109790487 [Cajanus cajan] >KYP36915.1 hypothetical protein KK1_041930 [Cajanus cajan])

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 22 MEKIGAPFPVHSQVRKIKEESETIIDWRPGQPEIRPPTTVF---RQISRSPLGISGRPIS 81
          M+  G   P+HSQVRKIK+ESE IIDW PG+PE+RP        R ISRSPLGISG+PIS
Sbjct: 7  MKDEGKGVPIHSQVRKIKQESEKIIDWSPGKPEVRPVLREIGRDRPISRSPLGISGQPIS 66

Query: 82 VGES 83
          VGES
Sbjct: 67 VGES 70

The following BLAST results are available for this feature:

BLAST of Bhi08G001091 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi08G001091 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi08G001091 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQJ2\|A0A0A0LQJ2_CUCSA	1.0e-24	85.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042955 PE=4 SV=1	[more]
tr\|A0A0B2SM01\|A0A0B2SM01_GLYSO	1.8e-13	62.86	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_041948 PE=4 SV=1	[more]
tr\|A0A2P6P1Q5\|A0A2P6P1Q5_ROSCH	5.1e-13	56.41	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0178031 PE=4...	[more]
tr\|A0A151R370\|A0A151R370_CAJCA	6.7e-13	65.63	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_041930 PE=4 SV=1	[more]
tr\|A0A0B2SH40\|A0A0B2SH40_GLYSO	1.1e-12	62.86	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_027713 PE=4 SV=1	[more]

BLAST of Bhi08G001091 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64190.1	1.5e-24	85.51	hypothetical protein Csa_1G042955 [Cucumis sativus]	[more]
PQQ15457.1	2.0e-13	75.44	hypothetical protein Pyn_28850 [Prunus yedoensis var. nudiflora]	[more]
NP_001342481.1	2.7e-13	62.86	uncharacterized protein LOC111138524 [Glycine max] >KHN45262.1 hypothetical prot...	[more]
PRQ15864.1	7.8e-13	56.41	hypothetical protein RchiOBHm_Chr7g0178031 [Rosa chinensis]	[more]
XP_020205234.1	1.0e-12	65.63	uncharacterized protein LOC109790487 [Cajanus cajan] >KYP36915.1 hypothetical pr...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M001091	Bhi08M001091	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34780	FAMILY NOT NAMED	coord: 5..82
None	No IPR available	PANTHER	PTHR34780:SF2	SUBFAMILY NOT NAMED	coord: 5..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G001091	MELO3C002147	Melon (DHL92) v3.5.1	mewgoB173
Bhi08G001091	ClCG04G010470	Watermelon (Charleston Gray)	wcgwgoB401
Bhi08G001091	Cucsa.122070	Cucumber (Gy14) v1	cgywgoB218
Bhi08G001091	CmaCh18G000820	Cucurbita maxima (Rimu)	cmawgoB0520
Bhi08G001091	CmaCh13G009780	Cucurbita maxima (Rimu)	cmawgoB0266
Bhi08G001091	Lsi02G002490	Bottle gourd (USVL1VR-Ls)	lsiwgoB238
Bhi08G001091	CsGy1G007210	Cucumber (Gy14) v2	cgybwgoB025
Bhi08G001091	MELO3C002147.2	Melon (DHL92) v3.6.1	medwgoB175
Bhi08G001091	Carg06637	Silver-seed gourd	carwgoB0600
Bhi08G001091	CsaV3_1G007310	Cucumber (Chinese Long) v3	cucwgoB031
Bhi08G001091	Cla018440	Watermelon (97103) v1	wgowmB518
Bhi08G001091	Cla97C04G077310	Watermelon (97103) v2	wgowmbB490

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G001091	Cucurbita moschata (Rifu)	cmowgoB0258
Bhi08G001091	Cucurbita moschata (Rifu)	cmowgoB0516
Bhi08G001091	Cucurbita pepo (Zucchini)	cpewgoB0045
Bhi08G001091	Cucurbita pepo (Zucchini)	cpewgoB0635
Bhi08G001091	Wild cucumber (PI 183967)	cpiwgoB028
Bhi08G001091	Cucumber (Chinese Long) v2	cuwgoB028
Bhi08G001091	Silver-seed gourd	carwgoB0473