CsaV3_6G049780 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT* Homology
BLAST of CsaV3_6G049780 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_004352 [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima]) HSP 1 Score: 77.8 bits (190), Expect = 3.1e-11 Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis]) HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06 Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. NCBI nr
Match: KAG6642713.1 (hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothetical protein I3842_09G159800 [Carya illinoinensis]) HSP 1 Score: 60.5 bits (145), Expect = 5.2e-06 Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.0e-16 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11 Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. ExPASy TrEMBL
Match: A0A5J5VQ30 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.5e-06 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of CsaV3_6G049780 vs. ExPASy TrEMBL
Match: A0A5D2UXY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.5e-06 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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