Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAACAATGGAAGAAGCACCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTGCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAATTCTTCATCGCCACCAAAATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTTCCACCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGATGATGAACAGAGGATAAACTACGCCAGAATGAGGCTTAGAAGAAAACGTCTCGGCAGCGAT
mRNA sequence
ATGAAGGAAACAATGGAAGAAGCACCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTGCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAATTCTTCATCGCCACCAAAATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTTCCACCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGATGATGAACAGAGGATAAACTACGCCAGAATGAGGCTTAGAAGAAAACGTCTCGGCAGCGAT
Coding sequence (CDS)
ATGAAGGAAACAATGGAAGAAGCACCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTGCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAATTCTTCATCGCCACCAAAATCCCCTGTTACCTCAATTGGGACTACCCTCCTCTCCTCTGCCCTAAATCTTCGATTTTCCCCTTTCTCTCACTTCACCTCCAATGGGGTTTCTCCCTCTTCCTCAAAAAACTCTCCCGATTCGGCCTCCCCAAAACCTCCTGGCGATCCAAATGCCCTTATCAACTTCCACCGCCTTTGATTCTCGCTAAGGGCGTCCACCCTGCTCAGTGGGATGATGAACAGAGGATAAACTACGCCAGAATGAGGCTTAGAAGAAAACGTCTCGGCAGCGAT
Protein sequence
MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLRRKRLGSD
Homology
BLAST of CsaV3_6G050400 vs. NCBI nr
Match:
XP_004134687.2 (uncharacterized protein LOC101221431 [Cucumis sativus])
HSP 1 Score: 282.0 bits (720), Expect = 2.7e-72
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP
Sbjct: 8 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 67
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR
Sbjct: 68 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 127
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 128 MRLRRKRLGSD 138
BLAST of CsaV3_6G050400 vs. NCBI nr
Match:
KAE8647699.1 (hypothetical protein Csa_004129, partial [Cucumis sativus])
HSP 1 Score: 282.0 bits (720), Expect = 2.7e-72
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP
Sbjct: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR
Sbjct: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 121 MRLRRKRLGSD 131
BLAST of CsaV3_6G050400 vs. NCBI nr
Match:
XP_008439813.1 (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo])
HSP 1 Score: 273.5 bits (698), Expect = 9.6e-70
Identity = 127/131 (96.95%), Postives = 128/131 (97.71%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
MK+TMEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP
Sbjct: 8 MKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 67
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR
Sbjct: 68 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 127
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 128 MRLRRKRLGSD 138
BLAST of CsaV3_6G050400 vs. NCBI nr
Match:
KAA0052667.1 (uncharacterized protein E6C27_scaffold120G002770 [Cucumis melo var. makuwa] >TYK13158.1 uncharacterized protein E5676_scaffold255G007700 [Cucumis melo var. makuwa])
HSP 1 Score: 267.3 bits (682), Expect = 6.9e-68
Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
Query: 5 MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 64
MEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL
Sbjct: 1 MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 60
Query: 65 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 124
HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR
Sbjct: 61 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 120
Query: 125 RKRLGSD 132
RKRLGSD
Sbjct: 121 RKRLGSD 127
BLAST of CsaV3_6G050400 vs. NCBI nr
Match:
XP_038883097.1 (uncharacterized protein LOC120074151 [Benincasa hispida])
HSP 1 Score: 255.4 bits (651), Expect = 2.7e-64
Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0
Query: 3 ETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFL 62
+ MEE PWPQKLQALTHILLCPTTAPPLASQ+ IATKIPCYLNWDYPPLLCPKSSIFPFL
Sbjct: 9 QIMEETPWPQKLQALTHILLCPTTAPPLASQYLIATKIPCYLNWDYPPLLCPKSSIFPFL 68
Query: 63 SLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMR 122
SLHLQWGFSLFLK+LSRFGLPKTSWRSKCPYQLPPPLILAKGVH AQW DEQR NY RMR
Sbjct: 69 SLHLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKGVHSAQWGDEQRKNYVRMR 128
Query: 123 LRRKRLGSD 132
LRRKRL SD
Sbjct: 129 LRRKRLVSD 137
BLAST of CsaV3_6G050400 vs. ExPASy TrEMBL
Match:
A0A0A0KK88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1)
HSP 1 Score: 282.0 bits (720), Expect = 1.3e-72
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP
Sbjct: 8 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 67
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR
Sbjct: 68 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 127
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 128 MRLRRKRLGSD 138
BLAST of CsaV3_6G050400 vs. ExPASy TrEMBL
Match:
A0A1S3B097 (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 4.7e-70
Identity = 127/131 (96.95%), Postives = 128/131 (97.71%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
MK+TMEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP
Sbjct: 8 MKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 67
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR
Sbjct: 68 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 127
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 128 MRLRRKRLGSD 138
BLAST of CsaV3_6G050400 vs. ExPASy TrEMBL
Match:
A0A5A7UDV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007700 PE=4 SV=1)
HSP 1 Score: 267.3 bits (682), Expect = 3.3e-68
Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
Query: 5 MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 64
MEE PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL
Sbjct: 1 MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 60
Query: 65 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 124
HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR
Sbjct: 61 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 120
Query: 125 RKRLGSD 132
RKRLGSD
Sbjct: 121 RKRLGSD 127
BLAST of CsaV3_6G050400 vs. ExPASy TrEMBL
Match:
A0A6J1EGM1 (uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC111433914 PE=4 SV=1)
HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61
Identity = 112/127 (88.19%), Postives = 117/127 (92.13%), Query Frame = 0
Query: 5 MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 64
MEE+PWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPK SIFPF SL
Sbjct: 1 MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60
Query: 65 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 124
HLQWGFSLFLK+LSRF LPKTSWRSKCP+Q PPPLILAKGV PAQW DEQR Y RMRLR
Sbjct: 61 HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
Query: 125 RKRLGSD 132
RKRLGSD
Sbjct: 121 RKRLGSD 127
BLAST of CsaV3_6G050400 vs. ExPASy TrEMBL
Match:
A0A6J1IR68 (uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635 PE=4 SV=1)
HSP 1 Score: 244.6 bits (623), Expect = 2.3e-61
Identity = 113/131 (86.26%), Postives = 120/131 (91.60%), Query Frame = 0
Query: 1 MKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFP 60
+K+ ME+APW QKL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC K SIFP
Sbjct: 5 VKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFP 64
Query: 61 FLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYAR 120
F SLHLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR NY R
Sbjct: 65 FPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVR 124
Query: 121 MRLRRKRLGSD 132
MRLRRKRLGSD
Sbjct: 125 MRLRRKRLGSD 135
BLAST of CsaV3_6G050400 vs. TAIR 10
Match:
AT2G33855.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 68/125 (54.40%), Postives = 80/125 (64.00%), Query Frame = 0
Query: 5 MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 64
MEE W Q++QA+THIL PTT P L SQFFI IP Y++WDYPP+ P
Sbjct: 1 MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSP---------T 60
Query: 65 HL-QWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRL 124
HL QW S F K++SRFGLP TSWRS PY PP ++A GV +W E+R YAR RL
Sbjct: 61 HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 116
Query: 125 RRKRL 129
RRKRL
Sbjct: 121 RRKRL 116
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_004134687.2 | 2.7e-72 | 100.00 | uncharacterized protein LOC101221431 [Cucumis sativus] | [more] |
| KAE8647699.1 | 2.7e-72 | 100.00 | hypothetical protein Csa_004129, partial [Cucumis sativus] | [more] |
| XP_008439813.1 | 9.6e-70 | 96.95 | PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo] | [more] |
| KAA0052667.1 | 6.9e-68 | 97.64 | uncharacterized protein E6C27_scaffold120G002770 [Cucumis melo var. makuwa] >TYK... | [more] |
| XP_038883097.1 | 2.7e-64 | 91.47 | uncharacterized protein LOC120074151 [Benincasa hispida] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KK88 | 1.3e-72 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1 | [more] |
| A0A1S3B097 | 4.7e-70 | 96.95 | uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=... | [more] |
| A0A5A7UDV0 | 3.3e-68 | 97.64 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A6J1EGM1 | 1.8e-61 | 88.19 | uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC1114339... | [more] |
| A0A6J1IR68 | 2.3e-61 | 86.26 | uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G33855.1 | 1.1e-31 | 54.40 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |
