CsaV3_3G036860 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTAAGATTGTTGGCATTTTTTAAGCCCATAACTGCCTTTGTTTTGGTGTCTCCATGTGACTTGAAAAAGGCAACAAACACACAATCTCTCTATTTTATTCTCCTCTCTATTTAATTTTCCTTTTTCCTTTTTTCTTTTCATTTTCTCCATTCCCATTAGACCTATTCCCCTCTTCTTCTTCTTCTTCTTCTAATAATAATAATCATTTCTCTCATTTTTCACCTCCAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAGAGAAAAAGAAACAGCATTAAGAAAAATGAACCACAATTCCCATGGCTTCTTCTTCTTCTTCTTCATCTCTTTTCTCTTCATTTTTCTTCTCTTTTCTTCACATTCTGCCTCTGCTAGTTTCCCTCCATCCAAACATGGTAAAACCCATTTCTAGAAACCCTTCCTTTTTTAATTTTTCTTCCCTCTTTTTCTTGTAAAAAAAAAAACTTCCATTATTTTCTCACTATTTCTTTCTGTTTCCCTTTCGATTTTCCTCGAAAATTTGCAGGTATAGAAGAAACCCACAGGAAGATCAGCTATGGATCAATGGTTCAATTAGGAGATTCATTGCCAGATTTCCCTCATGTAAATTAAATACCCTTTACTTTTTCATTTATTTATTTTTATTTTCTAATTTCCTTCTTTGGATTTTAATTTTAATTCTTTTTTTTTTTTTCTGGTAGATAAAGGGAGAGAAAGAAGTAGGAGAAGAAGAAGAAGGAGAGAAGAGGAAGATGATGTTAGAAGCTCACTTGGATTATGTTTACACACAAAATGAGAATCCTTGAATCAATATATGTTTTTATGTATATATCCAAATACTTAAACTAGAAGAAATTGTTGCTGTTTTCTTCGTATATTTATATATACAGTTTTATATTGTTTACATTTATTATCATTACTACACACTATTACTATTACTATTATTATATTCATTTCTTCTTCCCTTTTCTGGTCTCTTCTCAAGTCTATGATCTTATATTTAAGTTTTTATTATTATTACAAGGAAAATAAAGGCTTTAAGTAGATGTTAGGACCCCCTTTTCAT ATGAACCACAATTCCCATGGCTTCTTCTTCTTCTTCTTCATCTCTTTTCTCTTCATTTTTCTTCTCTTTTCTTCACATTCTGCCTCTGCTAGTTTCCCTCCATCCAAACATGGTATAGAAGAAACCCACAGGAAGATCAGCTATGGATCAATGGTTCAATTAGGAGATTCATTGCCAGATTTCCCTCATATAAAGGGAGAGAAAGAAGTAGGAGAAGAAGAAGAAGGAGAGAAGAGGAAGATGATGTTAGAAGCTCACTTGGATTATGTTTACACACAAAATGAGAATCCTTGA ATGAACCACAATTCCCATGGCTTCTTCTTCTTCTTCTTCATCTCTTTTCTCTTCATTTTTCTTCTCTTTTCTTCACATTCTGCCTCTGCTAGTTTCCCTCCATCCAAACATGGTATAGAAGAAACCCACAGGAAGATCAGCTATGGATCAATGGTTCAATTAGGAGATTCATTGCCAGATTTCCCTCATATAAAGGGAGAGAAAGAAGTAGGAGAAGAAGAAGAAGGAGAGAAGAGGAAGATGATGTTAGAAGCTCACTTGGATTATGTTTACACACAAAATGAGAATCCTTGA MNHNSHGFFFFFFISFLFIFLLFSSHSASASFPPSKHGIEETHRKISYGSMVQLGDSLPDFPHIKGEKEVGEEEEGEKRKMMLEAHLDYVYTQNENP* Homology
BLAST of CsaV3_3G036860 vs. NCBI nr
Match: XP_011651990.1 (phytosulfokines 5 [Cucumis sativus] >KGN59245.2 hypothetical protein Csa_001722 [Cucumis sativus]) HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. NCBI nr
Match: XP_016899647.1 (PREDICTED: uncharacterized protein LOC107990603 [Cucumis melo]) HSP 1 Score: 158.7 bits (400), Expect = 2.6e-35 Identity = 85/103 (82.52%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. NCBI nr
Match: XP_038906014.1 (uncharacterized protein LOC120091917 [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 3.6e-29 Identity = 79/109 (72.48%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. NCBI nr
Match: KAG6580671.1 (hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23 Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. NCBI nr
Match: XP_022935155.1 (uncharacterized protein LOC111442110 [Cucurbita moschata]) HSP 1 Score: 119.0 bits (297), Expect = 2.3e-23 Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. ExPASy TrEMBL
Match: A0A1S4DUI1 (Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35 Identity = 85/103 (82.52%), Postives = 88/103 (85.44%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. ExPASy TrEMBL
Match: A0A0A0LEF2 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_3G750390 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.1e-26 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. ExPASy TrEMBL
Match: A0A6J1F9T2 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-23 Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. ExPASy TrEMBL
Match: A0A6J1IYI6 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.7e-21 Identity = 66/97 (68.04%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of CsaV3_3G036860 vs. ExPASy TrEMBL
Match: A0A6J1KTY7 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17 Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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