Homology
BLAST of CsaV3_3G039840.1 vs. NCBI nr
Match:
XP_004136766.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >XP_011652162.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KGN59407.1 hypothetical protein Csa_001413 [Cucumis sativus])
HSP 1 Score: 846.7 bits (2186), Expect = 8.8e-242
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ
Sbjct: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
Query: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR
Sbjct: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
Query: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
Query: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
Query: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP
Sbjct: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419
BLAST of CsaV3_3G039840.1 vs. NCBI nr
Match:
XP_008443210.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443211.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443212.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443213.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])
HSP 1 Score: 817.0 bits (2109), Expect = 7.5e-233
Identity = 400/419 (95.47%), Postives = 412/419 (98.33%), Query Frame = 0
Query: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
MRY I FESP FLSKPTFSRIPFGPFNHFCQKRWRKP+V+AQTRLE RTRDLKLDKLATQ
Sbjct: 1 MRYEIFFESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQ 60
Query: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
L+KFRVILKL+ELM NRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPH+FD+FPHPVR
Sbjct: 61 LQKFRVILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVR 120
Query: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
DGFRESILEKYSDDFRLVDLEIVELVEKH++GA+AEVEKWREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFP 240
Query: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQ FGHRSSGGVQRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSL 300
Query: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
TVEKLVDV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKGTTQIVFLREAYAKGCLVEP
Sbjct: 301 TVEKLVDVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEP 360
Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNA +NGDWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419
BLAST of CsaV3_3G039840.1 vs. NCBI nr
Match:
KAA0053914.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK25491.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])
HSP 1 Score: 786.6 bits (2030), Expect = 1.1e-223
Identity = 385/401 (96.01%), Postives = 397/401 (99.00%), Query Frame = 0
Query: 19 SRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRK 78
SRIPFGPFNHFCQKRWRKP+V+AQTRLE RTRDLKLDKLATQL+KFRVILKL+ELM NRK
Sbjct: 30 SRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRK 89
Query: 79 RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQE 138
RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPH+FD+FPHPVRRNLCCRITGKMTALMKQE
Sbjct: 90 RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQE 149
Query: 139 ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV 198
ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV
Sbjct: 150 ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV 209
Query: 199 DLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR 258
DLEIVELVEKH++GA+AEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR
Sbjct: 210 DLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR 269
Query: 259 NWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 318
NWQRLPYTQPYEKRQ FGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDF
Sbjct: 270 NWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDF 329
Query: 319 AIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR 378
AIEVNIRELLLKHPG+FYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR
Sbjct: 330 AIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR 389
Query: 379 RHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
RHTKQLESSMEIKENDNA +NGDWLSKSEGSWVLPILQGFD
Sbjct: 390 RHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430
BLAST of CsaV3_3G039840.1 vs. NCBI nr
Match:
XP_038903898.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903900.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])
HSP 1 Score: 776.2 bits (2003), Expect = 1.5e-220
Identity = 379/419 (90.45%), Postives = 400/419 (95.47%), Query Frame = 0
Query: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
MRY I ES + LSKP SRIPFGPFNHFCQ+RWRKP+ NAQTRLEDRTRDLKLDKLATQ
Sbjct: 1 MRYKISLESALSLSKPKISRIPFGPFNHFCQRRWRKPVENAQTRLEDRTRDLKLDKLATQ 60
Query: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
+KFR+ILKL ELM +RKRGPFVSLQIMSRWRNIVG++IGIGEF+HKYPH+FD+FPHPVR
Sbjct: 61 FQKFRIILKLRELMIDRKRGPFVSLQIMSRWRNIVGLKIGIGEFVHKYPHVFDVFPHPVR 120
Query: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
RNLCCRITGKMTALMKQEENVIND+EIETVQRLKKLLMMSVNG LHVHALRLIS+ELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDLEIETVQRLKKLLMMSVNGALHVHALRLISKELGLP 180
Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
DGF ESILEKYSDDFRLVDLEIVELVEKH+NGA+AEVE+WREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFGESILEKYSDDFRLVDLEIVELVEKHENGAVAEVEQWREREFREKWLSEFDVKYAFP 240
Query: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
INFPTGF IEGGFREKLRNWQRLPY +PYEKRQGFG RSSGG+QRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFRIEGGFREKLRNWQRLPYAKPYEKRQGFGFRSSGGMQRHEKRAVAVLHELLSL 300
Query: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
TVEKLVD+ERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCL+EP
Sbjct: 301 TVEKLVDIERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLIEP 360
Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKEND+A NGDWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDSAAYNGDWLSKSEGSWVLPILQGFD 419
BLAST of CsaV3_3G039840.1 vs. NCBI nr
Match:
XP_022937832.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_022937840.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 734.2 bits (1894), Expect = 6.4e-208
Identity = 360/414 (86.96%), Postives = 386/414 (93.24%), Query Frame = 0
Query: 6 LFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFR 65
LFES LS FSR+ FGPFNHFCQ+RW KP V AQTRLEDRTRDLKLDKLATQ++K R
Sbjct: 3 LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLR 62
Query: 66 VILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCC 125
+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+HKYPH+FD+FPHP+RRNLCC
Sbjct: 63 IIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCC 122
Query: 126 RITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRE 185
RITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRE
Sbjct: 123 RITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRE 182
Query: 186 SILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPT 245
SIL KYSDDFRLVDLEIVELV+KH+N A+AEVE+WREREFREKWLSEFDVK+AFPINFPT
Sbjct: 183 SILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPT 242
Query: 246 GFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKL 305
GF I+GGFREKLRNWQRLPY +PYEKRQGFG RS GG+ R EKRAVAVLHELLSLTVEKL
Sbjct: 243 GFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKL 302
Query: 306 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYI 365
VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCLVEPNPIYI
Sbjct: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYI 362
Query: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
VRRKMQDL+LLGRRHTKQLESSMEIKE+ +A +NGDWLSKSEGSWVLPILQGFD
Sbjct: 363 VRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CsaV3_3G039840.1 vs. ExPASy Swiss-Prot
Match:
Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)
HSP 1 Score: 247.3 bits (630), Expect = 3.1e-64
Identity = 143/359 (39.83%), Postives = 208/359 (57.94%), Query Frame = 0
Query: 36 KPIVNAQT--RLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFV--SLQIMSRW 95
KP + T + +DR RD D KK R ++K + L+ ++ L ++R
Sbjct: 32 KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91
Query: 96 RNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQ 155
+ + G FL K+PH+F+++ HPV+R L CR+T K ++ E + D + V
Sbjct: 92 LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151
Query: 156 RLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLE-----IVELV 215
RL+KL+MMS G + + +R+ E GLP+ F S++ K+ FRL+D E +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211
Query: 216 EKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNWQRLPYT 275
EK N +I +E+ RE E+R K + DV+++F +NFP GF I FR + WQRLPY
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271
Query: 276 QPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 335
PYE G+ RS R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331
Query: 336 LLLKHPGIFYISTKGT---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTK 383
LL+H GIFYIST+G VFLRE Y +G LVEPN +Y+ RR++ +LVL+ R K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CsaV3_3G039840.1 vs. ExPASy Swiss-Prot
Match:
Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 1.8e-35
Identity = 121/386 (31.35%), Postives = 204/386 (52.85%), Query Frame = 0
Query: 35 RKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYE-LMNNRKRGPFVSLQIMSRWRN 94
R+ V AQ ++ R +++ D + + KK +++LKL L++N R +SL+ + R+R
Sbjct: 51 RRLAVVAQAAVK-RRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDR--VMSLRDLGRFRR 110
Query: 95 IVGV--RIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQ 154
+G+ + + L ++P +F++ V +L R+T L E ++ N+ E V
Sbjct: 111 DLGLTRKRRLIALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDELHLKNESEGLAVT 170
Query: 155 RLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLEI---VELVEK 214
+L+KLLMMS + + + + + +LGLP FR++I +Y FR+V ++ +EL
Sbjct: 171 KLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHW 230
Query: 215 HKNGAIAEVEKWREREFREKWLSEFDVKYAFPINF-----PTGFIIEGGFREKLRNWQRL 274
A++ E E E R + E ++ P+ F P G + G ++ ++ +
Sbjct: 231 DPELAVSAAEV-AEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEM 290
Query: 275 PYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 334
PY PY F H SG ++ EK A V+HE+LSLT+EK V+ L HFR +F +
Sbjct: 291 PYISPY---SDFSHLRSGSAEK-EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQS 350
Query: 335 IRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTKQ 394
+R +L++HP +FY+S KG VFLREAY LVE + + +++ KM+ LV + R +
Sbjct: 351 LRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRG 410
Query: 395 LESSMEIKENDNATENGDWLSKSEGS 410
+ ++ E E D NG SEGS
Sbjct: 411 VPATSE--EADRT--NGAAQMLSEGS 423
BLAST of CsaV3_3G039840.1 vs. ExPASy Swiss-Prot
Match:
B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 8.8e-35
Identity = 117/386 (30.31%), Postives = 198/386 (51.30%), Query Frame = 0
Query: 33 RWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFVSLQIMSRWR 92
R R V AQ ++ R ++ D + + KK +++LKL ++ + +SL+ + R+R
Sbjct: 43 RPRPAAVVAQAAVK-RRKEAPFDTVIQRDKKLKLVLKLRNIL-VAQPDRVMSLRELGRFR 102
Query: 93 NIVGV--RIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETV 152
+G+ + + L ++P +FD+ V +L R+T L E + N+ E V
Sbjct: 103 RDLGLTRKRRLIALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNESEGLAV 162
Query: 153 QRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLE---IVELVE 212
+L+KLLMMS + + + + +LGLP FR+++ +Y FR+V ++ +EL
Sbjct: 163 AKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTH 222
Query: 213 KHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINF-----PTGFIIEGGFREKLRNWQR 272
A++ E E E R + E ++ P+ F P G + G ++ ++
Sbjct: 223 WDPELAVSAAE-LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKE 282
Query: 273 LPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEV 332
+PY PY F H SG ++ EK A V+HE+LSLTVEK V+ L HFR +F
Sbjct: 283 MPYISPY---ADFSHLRSGSDEK-EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQ 342
Query: 333 NIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTK 392
++R ++++HP +FY+S KG VFLREAY LVE N + +++ KM+ LV + R +
Sbjct: 343 SLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRR 402
Query: 393 QLESSMEIKENDNAT-ENGDWLSKSE 408
+ E E N + ++ D +S E
Sbjct: 403 AAVGTGEEAEGMNGSLQSRDQVSDEE 420
BLAST of CsaV3_3G039840.1 vs. ExPASy Swiss-Prot
Match:
A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)
HSP 1 Score: 146.4 bits (368), Expect = 7.5e-34
Identity = 102/340 (30.00%), Postives = 178/340 (52.35%), Query Frame = 0
Query: 48 RTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGV--RIGIGEFL 107
R ++L D + + KK +++L + +++ ++ +SL+ + ++R +G+ R L
Sbjct: 78 RRKELTFDSVVQRDKKLKLVLNIRKILVSQP-DRMMSLRGLGKYRRDLGLKKRRRFIALL 137
Query: 108 HKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTL 167
KYP +F++ +L ++T + L E + N++E V +L+KL+MMS++ +
Sbjct: 138 RKYPGVFEIVEEGA-YSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRI 197
Query: 168 HVHALRLISRELGLPDGFRESILEKYSDDFRLVDL---EIVELVEKHKNGAIAEVE---- 227
+ + + +LGLP FR++I ++Y FR+V +EL A++ E
Sbjct: 198 LLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELSED 257
Query: 228 KWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHR 287
R RE E+ L + P G + K+ ++ + Y PY + F H
Sbjct: 258 DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY---KDFSHL 317
Query: 288 SSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYIS 347
SG +++ EK A V+HELLSLT EK V+ L HFR +F +R +L++HP +FY+S
Sbjct: 318 RSGTLEK-EKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 377
Query: 348 TKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR 379
KG VFLREAY L++ +P+ +V+ KM+ LV + R
Sbjct: 378 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPR 411
BLAST of CsaV3_3G039840.1 vs. ExPASy Swiss-Prot
Match:
Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)
HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22
Identity = 89/310 (28.71%), Postives = 143/310 (46.13%), Query Frame = 0
Query: 83 VSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVI 142
+ + +S+ V I FL K+P +F+ F P R+T + T L +QE V
Sbjct: 67 IPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVY 126
Query: 143 NDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLE- 202
+ RLKKL++MS + L + ++ + LGLPD + + FR VD+E
Sbjct: 127 QTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED 186
Query: 203 -IVELVEKHKNG--AIAEVEKWREREFR-EKWLSEFDVKYAFPINFPTGFIIEGGFREKL 262
+ L + G ++ ++K ++ R E L E + FP+ G + + L
Sbjct: 187 GVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIE----FPLFPSKGCRLRVKIEDWL 246
Query: 263 RNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRD 322
+Q+LPY PY+ S EKR V LHELL L VE + ++L+ ++
Sbjct: 247 MEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGFLHELLCLFVEHSAERKKLLCLKKH 306
Query: 323 FAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKM------Q 382
F + + + +HP IFY+S K T LRE Y VE +P+ VR+K
Sbjct: 307 FGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNS 366
BLAST of CsaV3_3G039840.1 vs. ExPASy TrEMBL
Match:
A0A0A0LFE1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 SV=1)
HSP 1 Score: 846.7 bits (2186), Expect = 4.3e-242
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ
Sbjct: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
Query: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR
Sbjct: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
Query: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
Query: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
Query: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP
Sbjct: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 419
BLAST of CsaV3_3G039840.1 vs. ExPASy TrEMBL
Match:
A0A1S3B7J9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4 SV=1)
HSP 1 Score: 817.0 bits (2109), Expect = 3.6e-233
Identity = 400/419 (95.47%), Postives = 412/419 (98.33%), Query Frame = 0
Query: 1 MRYAILFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQ 60
MRY I FESP FLSKPTFSRIPFGPFNHFCQKRWRKP+V+AQTRLE RTRDLKLDKLATQ
Sbjct: 1 MRYEIFFESPFFLSKPTFSRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQ 60
Query: 61 LKKFRVILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVR 120
L+KFRVILKL+ELM NRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPH+FD+FPHPVR
Sbjct: 61 LQKFRVILKLHELMTNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVR 120
Query: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP
Sbjct: 121 RNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLP 180
Query: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFP 240
DGFRESILEKYSDDFRLVDLEIVELVEKH++GA+AEVEKWREREFREKWLSEFDVKYAFP
Sbjct: 181 DGFRESILEKYSDDFRLVDLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFP 240
Query: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 300
INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQ FGHRSSGGVQRHEKRAVAVLHELLSL
Sbjct: 241 INFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSL 300
Query: 301 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 360
TVEKLVDV+RLVHFRRDFAIEVNIRELLLKHPG+FYISTKGTTQIVFLREAYAKGCLVEP
Sbjct: 301 TVEKLVDVDRLVHFRRDFAIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEP 360
Query: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNA +NGDWLSKSEGSWVLPILQGFD
Sbjct: 361 NPIYIVRRKMQDLVLLGRRHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 419
BLAST of CsaV3_3G039840.1 vs. ExPASy TrEMBL
Match:
A0A5A7UFE6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006380 PE=4 SV=1)
HSP 1 Score: 786.6 bits (2030), Expect = 5.3e-224
Identity = 385/401 (96.01%), Postives = 397/401 (99.00%), Query Frame = 0
Query: 19 SRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRK 78
SRIPFGPFNHFCQKRWRKP+V+AQTRLE RTRDLKLDKLATQL+KFRVILKL+ELM NRK
Sbjct: 30 SRIPFGPFNHFCQKRWRKPVVSAQTRLEGRTRDLKLDKLATQLQKFRVILKLHELMTNRK 89
Query: 79 RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQE 138
RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPH+FD+FPHPVRRNLCCRITGKMTALMKQE
Sbjct: 90 RGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHVFDVFPHPVRRNLCCRITGKMTALMKQE 149
Query: 139 ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV 198
ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV
Sbjct: 150 ENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLV 209
Query: 199 DLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR 258
DLEIVELVEKH++GA+AEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR
Sbjct: 210 DLEIVELVEKHEDGAVAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLR 269
Query: 259 NWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDF 318
NWQRLPYTQPYEKRQ FGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDV+RLVHFRRDF
Sbjct: 270 NWQRLPYTQPYEKRQRFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVDRLVHFRRDF 329
Query: 319 AIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR 378
AIEVNIRELLLKHPG+FYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR
Sbjct: 330 AIEVNIRELLLKHPGVFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGR 389
Query: 379 RHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
RHTKQLESSMEIKENDNA +NGDWLSKSEGSWVLPILQGFD
Sbjct: 390 RHTKQLESSMEIKENDNAADNGDWLSKSEGSWVLPILQGFD 430
BLAST of CsaV3_3G039840.1 vs. ExPASy TrEMBL
Match:
A0A6J1FCB5 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444101 PE=4 SV=1)
HSP 1 Score: 734.2 bits (1894), Expect = 3.1e-208
Identity = 360/414 (86.96%), Postives = 386/414 (93.24%), Query Frame = 0
Query: 6 LFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFR 65
LFES LS FSR+ FGPFNHFCQ+RW KP V AQTRLEDRTRDLKLDKLATQ++K R
Sbjct: 3 LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRTRDLKLDKLATQIRKLR 62
Query: 66 VILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCC 125
+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+HKYPH+FD+FPHP+RRNLCC
Sbjct: 63 IIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCC 122
Query: 126 RITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRE 185
RITGKM ALMKQEENVIND EIETVQRLKKLLMMSVNGTLH+HALRLIS+ELGLPDGFRE
Sbjct: 123 RITGKMAALMKQEENVINDSEIETVQRLKKLLMMSVNGTLHIHALRLISKELGLPDGFRE 182
Query: 186 SILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPT 245
SIL KYSDDFRLVDLEIVELV+KH+N A+AEVE+WREREFREKWLSEFDVK+AFPINFPT
Sbjct: 183 SILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPT 242
Query: 246 GFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKL 305
GF I+GGFREKLRNWQRLPY +PYEKRQGFG RS GG+ R EKRAVAVLHELLSLTVEKL
Sbjct: 243 GFKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRREKRAVAVLHELLSLTVEKL 302
Query: 306 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYI 365
VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCLVEPNPIYI
Sbjct: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYI 362
Query: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
VRRKMQDL+LLGRRHTKQLESSMEIKE+ +A +NGDWLSKSEGSWVLPILQGFD
Sbjct: 363 VRRKMQDLLLLGRRHTKQLESSMEIKEHISAADNGDWLSKSEGSWVLPILQGFD 416
BLAST of CsaV3_3G039840.1 vs. ExPASy TrEMBL
Match:
A0A6J1I6W3 (protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470166 PE=4 SV=1)
HSP 1 Score: 724.9 bits (1870), Expect = 1.9e-205
Identity = 356/414 (85.99%), Postives = 383/414 (92.51%), Query Frame = 0
Query: 6 LFESPIFLSKPTFSRIPFGPFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFR 65
LFES LS FSR+ FGPFNHFCQ+RW KP V AQTRLEDR RDLKLD LATQ++K R
Sbjct: 3 LFESAFSLSTTDFSRLRFGPFNHFCQRRWGKPAVTAQTRLEDRIRDLKLDTLATQIRKLR 62
Query: 66 VILKLYELMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCC 125
+I KL ELM +RKRGPFVSLQIMSRWRN VG+RIGIG+F+HKYPH+FD+FPHP+RRNLCC
Sbjct: 63 IIFKLRELMIDRKRGPFVSLQIMSRWRNFVGLRIGIGDFVHKYPHVFDVFPHPLRRNLCC 122
Query: 126 RITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRE 185
RITGKM ALMKQEENVIND EIETVQRLKKLLMMS NGTLH+HALRLIS+ELGLPDGFRE
Sbjct: 123 RITGKMAALMKQEENVINDSEIETVQRLKKLLMMSANGTLHIHALRLISKELGLPDGFRE 182
Query: 186 SILEKYSDDFRLVDLEIVELVEKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPT 245
SIL KYSDDFRLVDLEIVELV+KH+N A+AEVE+WREREFREKWLSEFDVK+AFPINFPT
Sbjct: 183 SILVKYSDDFRLVDLEIVELVDKHENVAVAEVEQWREREFREKWLSEFDVKFAFPINFPT 242
Query: 246 GFIIEGGFREKLRNWQRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKL 305
G+ I+GGFREKLRNWQRLPY +PYEKRQGFG RS GG+ RHEKRAVAVLHELLSLTVEKL
Sbjct: 243 GYKIKGGFREKLRNWQRLPYAKPYEKRQGFGVRSCGGMHRHEKRAVAVLHELLSLTVEKL 302
Query: 306 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYI 365
VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKG TQIVFLREAYAKGCLVEPNPIYI
Sbjct: 303 VDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGNTQIVFLREAYAKGCLVEPNPIYI 362
Query: 366 VRRKMQDLVLLGRRHTKQLESSMEIKENDNATENGDWLSKSEGSWVLPILQGFD 420
VRRKMQDL+LLGRRHTKQLESSMEIKE+ +A +NGD LSKSEGSWVLPILQGFD
Sbjct: 363 VRRKMQDLLLLGRRHTKQLESSMEIKEHVSAADNGDCLSKSEGSWVLPILQGFD 416
BLAST of CsaV3_3G039840.1 vs. TAIR 10
Match:
AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 480.3 bits (1235), Expect = 1.6e-135
Identity = 230/398 (57.79%), Postives = 311/398 (78.14%), Query Frame = 0
Query: 25 PFNHFCQKRWRKPIVNAQTRLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFVS 84
P + Q+RW KP+ +AQTRLE+RTRD +LDK+ Q++K +IL++ +LM+++KRGPFVS
Sbjct: 45 PLYFYNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSSKKRGPFVS 104
Query: 85 LQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVIND 144
LQ+MSRW+N+VG+ + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV+ +
Sbjct: 105 LQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRE 164
Query: 145 MEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLEIVE 204
E++ V+R+KKLL++S +G L VHALRLI +ELGLP+ FR+SIL KYS +FRLVDLE +E
Sbjct: 165 CEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLETLE 224
Query: 205 LVEKHKNG-AIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNWQRL 264
LV++ +A+VE+WRE E+REKWLS+F+ YAFPI+ PTGF IE GFRE+L+NWQR+
Sbjct: 225 LVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRV 284
Query: 265 PYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVN 324
PY +PY++++ S G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D IEVN
Sbjct: 285 PYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVN 344
Query: 325 IRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTKQ 384
+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL R+++
Sbjct: 345 VREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRM 404
Query: 385 L-----ESSMEIKEND-NATENGDWLSKSEGSWVLPIL 416
L E+ E K D + N DW +G WVLPIL
Sbjct: 405 LLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 437
BLAST of CsaV3_3G039840.1 vs. TAIR 10
Match:
AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 411.4 bits (1056), Expect = 8.8e-115
Identity = 197/341 (57.77%), Postives = 264/341 (77.42%), Query Frame = 0
Query: 82 FVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENV 141
F + ++MSRW+N+VG+ + +G F+ KYPH F++F HP +NLCC+IT K L+ +EENV
Sbjct: 17 FSTNKLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENV 76
Query: 142 INDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLE 201
+ + E++ V+R+KKLL++S +G L VHALRLI +ELGLP+ FR+SIL KYS +FRLVDLE
Sbjct: 77 VRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLE 136
Query: 202 IVELVEKHKNG-AIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNW 261
+ELV++ +A+VE+WRE E+REKWLS+F+ YAFPI+ PTGF IE GFRE+L+NW
Sbjct: 137 TLELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNW 196
Query: 262 QRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAI 321
QR+PY +PY++++ S G++R EKR VAV+HELLSLTVEK+V+VERL HFR+D I
Sbjct: 197 QRVPYVKPYDRKE-----ISRGLERFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGI 256
Query: 322 EVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRH 381
EVN+RE++LKHPGIFY+STKG++Q +FLREAY+KGCL+EPNPIY VRRKM DLVLL R+
Sbjct: 257 EVNVREVILKHPGIFYVSTKGSSQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRY 316
Query: 382 TKQL-----ESSMEIKEND-NATENGDWLSKSEGSWVLPIL 416
++ L E+ E K D + N DW +G WVLPIL
Sbjct: 317 SRMLLQREDETHREEKSRDVLISSNEDWEGGRDGDWVLPIL 352
BLAST of CsaV3_3G039840.1 vs. TAIR 10
Match:
AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 247.3 bits (630), Expect = 2.2e-65
Identity = 143/359 (39.83%), Postives = 208/359 (57.94%), Query Frame = 0
Query: 36 KPIVNAQT--RLEDRTRDLKLDKLATQLKKFRVILKLYELMNNRKRGPFV--SLQIMSRW 95
KP + T + +DR RD D KK R ++K + L+ ++ L ++R
Sbjct: 32 KPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARR 91
Query: 96 RNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQ 155
+ + G FL K+PH+F+++ HPV+R L CR+T K ++ E + D + V
Sbjct: 92 LGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVT 151
Query: 156 RLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDDFRLVDLE-----IVELV 215
RL+KL+MMS G + + +R+ E GLP+ F S++ K+ FRL+D E +E+V
Sbjct: 152 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 211
Query: 216 EKHKNGAIAEVEKWREREFREKWLSEFDVKYAFPINFPTGFIIEGGFREKLRNWQRLPYT 275
EK N +I +E+ RE E+R K + DV+++F +NFP GF I FR + WQRLPY
Sbjct: 212 EKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYW 271
Query: 276 QPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRE 335
PYE G+ RS R EKR+VA +HELLSLTVEK + +ER+ HFR + ++E
Sbjct: 272 SPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKE 331
Query: 336 LLLKHPGIFYISTKGT---TQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTK 383
LL+H GIFYIST+G VFLRE Y +G LVEPN +Y+ RR++ +LVL+ R K
Sbjct: 332 FLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 390
BLAST of CsaV3_3G039840.1 vs. TAIR 10
Match:
AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 238.0 bits (606), Expect = 1.3e-62
Identity = 139/358 (38.83%), Postives = 208/358 (58.10%), Query Frame = 0
Query: 48 RTRDLKLDKLATQLKKFRVILKLYE--LMNNRKRGPFVSLQIMSRWRNIVGVRIGIGEFL 107
R+RD +KL + K ++ + + L N P +S++ +SR + + G FL
Sbjct: 34 RSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQKLHLNRGAASFL 93
Query: 108 HKYPHLFDLFPHPVRRNLCCRITGKMTALMKQEENVINDMEIETVQRLKKLLMMSVNGTL 167
KYPH+F + PV+ CR+T + +QE I V RL +LL MS++ ++
Sbjct: 94 RKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLVRLLSMSISKSI 153
Query: 168 HVHALRLISRELGLPDGFRESILEKYSDDFRLVD-----LEIVELVEKHKNGA--IAEVE 227
+ A+ + RELGLPD F +S++ K F+L D I+ELV++ + A VE
Sbjct: 154 PLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQEEEKRLEFEAAVE 213
Query: 228 KWREREFREKWLS--EFDVKYAFPINFPTGFIIEGGFREKLRNWQRLPYTQPYEKRQGFG 287
KWR E ++ S +++++F ++P G + F+ K++ WQRLPY PYE G
Sbjct: 214 KWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLPYVGPYEDMVG-K 273
Query: 288 HRSSGGVQRHEKRAVAVLHELLSLTVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFY 347
+S GV EKRAVA+ HE L+LTVEK+V+VE++ HFR+ F I++NIR+L L HPG+FY
Sbjct: 274 KKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIRDLFLDHPGMFY 333
Query: 348 ISTKGTTQIVFLREAYAKGCLVEPNPIYIVRRKMQDLVLLGRRHTKQLESSMEIKEND 395
+STKG VFLREAY +G L++PNP+Y RRK+ DLVLLGR + + E +
Sbjct: 334 VSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAALSESGNTSMSEQE 390
BLAST of CsaV3_3G039840.1 vs. TAIR 10
Match:
AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )
HSP 1 Score: 156.4 bits (394), Expect = 5.1e-38
Identity = 104/317 (32.81%), Postives = 164/317 (51.74%), Query Frame = 0
Query: 78 KRGP--FVSLQIMSRWRNIVGVRIGIGEFLHKYPHLFDLFPHPVRRNL-CCRITGKMTAL 137
KR P F++ + ++ W+ ++G+ + + FL +YP LF FPH +L C ++T L
Sbjct: 62 KRSPTGFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALML 121
Query: 138 MKQEENVINDMEIETVQRLKKLLMMSVNGTLHVHALRLISRELGLPDGFRESILEKYSDD 197
QEE + E +TV+RL ++LMM + T+ + +L + +LGLPD + ++++ KY D
Sbjct: 122 DSQEEIIHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDH 181
Query: 198 FRLVDLE----IVELVEKHKNGAIAEVEKWRE------REFREKWLSEFDVKYAFPINFP 257
F V ++LV+ A + ++K E E R + FP++FP
Sbjct: 182 FCFVKASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFP 241
Query: 258 TGFIIEGGFREKLRNW----QRLPYTQPYEKRQGFGHRSSGGVQRHEKRAVAVLHELLSL 317
G+ G ++K++ W Q+LPY PY+ S EKRAVAVLHELLSL
Sbjct: 242 RGY----GAQKKVKAWMDEFQKLPYISPYDDPSNIDPES----DLMEKRAVAVLHELLSL 301
Query: 318 TVEKLVDVERLVHFRRDFAIEVNIRELLLKHPGIFYISTKGTTQIVFLREAYAKGCLVEP 377
T+ K L R + I L ++PGIFY+S K T V L+E Y +G LV+P
Sbjct: 302 TIHKKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDP 361
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004136766.1 | 8.8e-242 | 100.00 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >XP_011652162.1 protein RO... | [more] |
XP_008443210.1 | 7.5e-233 | 95.47 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008443211.1 PR... | [more] |
KAA0053914.1 | 1.1e-223 | 96.01 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK25491.1 prote... | [more] |
XP_038903898.1 | 1.5e-220 | 90.45 | protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038903899.1 protein ... | [more] |
XP_022937832.1 | 6.4e-208 | 86.96 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Cucurbita moschata] >XP_02293784... | [more] |
Match Name | E-value | Identity | Description | |
Q689D6 | 3.1e-64 | 39.83 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... | [more] |
Q65XL5 | 1.8e-35 | 31.35 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... | [more] |
B6TTV8 | 8.8e-35 | 30.31 | Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... | [more] |
A0MFS5 | 7.5e-34 | 30.00 | Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... | [more] |
Q9ZUZ6 | 1.7e-22 | 28.71 | Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LFE1 | 4.3e-242 | 100.00 | PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816690 PE=4 S... | [more] |
A0A1S3B7J9 | 3.6e-233 | 95.47 | protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103486860 PE=4... | [more] |
A0A5A7UFE6 | 5.3e-224 | 96.01 | Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A6J1FCB5 | 3.1e-208 | 86.96 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... | [more] |
A0A6J1I6W3 | 1.9e-205 | 85.99 | protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |
AT5G45790.2 | 1.6e-135 | 57.79 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT5G45790.1 | 8.8e-115 | 57.77 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT4G33495.1 | 2.2e-65 | 39.83 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT1G06440.1 | 1.3e-62 | 38.83 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |
AT3G58520.1 | 5.1e-38 | 32.81 | Ubiquitin carboxyl-terminal hydrolase family protein | [more] |