Bhi12G000040 (gene) Wax gourd (B227) v1

Overview
NameBhi12G000040
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr12: 1543886 .. 1544129 (+)
RNA-Seq ExpressionBhi12G000040
SyntenyBhi12G000040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAATCCAGCAATCGATAAACGAAGAACAGATCAAACCAGAACAAGAACAAGAAGAAGAAATCATCGAACAATTCAAGGGAGAGAACAAAAAATTACAAAAATCGCCGCTAAGCCGTTACGCCGCTTGGTCGATCGACGAAAGGGAGATTATGAAGGATGAGAAACCGGATACGGCGAGGAAATGGGGCGGAATGAAAGAGCTGCCGGAGCACCTCCACGAGCACCGCCGTGTACTCCTCTAG

mRNA sequence

AACAATCCAGCAATCGATAAACGAAGAACAGATCAAACCAGAACAAGAACAAGAAGAAGAAATCATCGAACAATTCAAGGGAGAGAACAAAAAATTACAAAAATCGCCGCTAAGCCGTTACGCCGCTTGGTCGATCGACGAAAGGGAGATTATGAAGGATGAGAAACCGGATACGGCGAGGAAATGGGGCGGAATGAAAGAGCTGCCGGAGCACCTCCACGAGCACCGCCGTGTACTCCTCTAG

Coding sequence (CDS)

AACAATCCAGCAATCGATAAACGAAGAACAGATCAAACCAGAACAAGAACAAGAAGAAGAAATCATCGAACAATTCAAGGGAGAGAACAAAAAATTACAAAAATCGCCGCTAAGCCGTTACGCCGCTTGGTCGATCGACGAAAGGGAGATTATGAAGGATGAGAAACCGGATACGGCGAGGAAATGGGGCGGAATGAAAGAGCTGCCGGAGCACCTCCACGAGCACCGCCGTGTACTCCTCTAG

Protein sequence

TIQQSINEEQIKPEQEQEEEIIEQFKGENKKLQKSPLSRYAAWSIDEREIMKDEKPDTARKWGGMKELPEHLHEHRRVLL
Homology
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BLAST of Bhi12G000040 vs. NCBI nr
Match: KAG6579605.1 (hypothetical protein SDJN03_24053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.3 bits (129), Expect = 5.6e-04
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 45  IDEREIMKDEKPDTARKWGGMKELPEHLHEHRRVLL 81
           + ER+I+KDEK D+ARKW GM+ELPEHL +  RVLL
Sbjct: 140 VGERKIVKDEKSDSARKWRGMEELPEHLRKQHRVLL 175

The following BLAST results are available for this feature:
BLAST of Bhi12G000040 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000040 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi12G000040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579605.15.6e-0466.67hypothetical protein SDJN03_24053, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Bhi12G000040 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000040Bhi12M000040mRNA