Bhi09G003012 (gene) Wax gourd (B227) v1

Overview
NameBhi09G003012
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptiontRNA-methyltransferase
Locationchr9: 91955860 .. 91958015 (-)
RNA-Seq ExpressionBhi09G003012
SyntenyBhi09G003012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATTAGTTCAATATTTATAGAAGTTTATATGCAAGAATTAAATTTTTAATAATGAGTCTTTTTTCTTTTTAAGTACAATAGTGAGTCTAAATTGTTGAAAATATTACTCGTGGATGACCAATAAATCTGCCAATGAATTAATATAATTTTTTTTTGTCATTTTCTATCCAATATTTGTGATGAAGCTATTTTCGATCAAAATATAAAATTGAAGTGGCTATAAATGCACGATGGTAATTAAAAATTCGAAAACCCAACTGAAAAATTGAAAGAAAAAAAACACAGCCTCCAAAATCAAGTTCCCCTCCAAGTCCCAGTAATGGAGACCAGAAGCCATAGATTTCTCATTTGAAAACGATCAAATCATGGCTTCGAATTTCATTCTTGGATTTCATTACCCAAATCCACACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTCAAATCTGCTGCAGAATAAATCGCCGCCTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCCGTTTCTGAGGGCGCCGAGGGTAGAGTTAAAGATGAGGAACTTCTCATTTCATCTTCTTCTGGTATGCATTAATTCACTGCTTTTGATTCTTCAGTGCTTATTTTCTCGATTTGTTCTTTCTACTTTGTGTTCGTCTCTTTGCTGCTGCTTGTTTATTTGTTCCTTCAAAATTGTGAGTGCTTTGCTTATTGGTTCTGTAATCCTATGGTTTATATTCCTCTACAATTGAAGAATCCTATTTGTAAATCTGAACGATTAAGGCTTTAAATTCTTTTTCAGAATATATTATTAAGGGAATGGTCATTATGGACTCCTTTTTGATATGGAAGGGGATCCAATTCCAATCCAAGTGGCCTATCTATACAAATATAATGAAGTAATGAATAATGATCATATTGTCTTCCTTGGTTAAATACATTTCTAGTTTCTATGCTTTGACTAGCATGATTCCGTTTCCAATTTAGTTCCAATGCTTTTAGAAGTTTCATTATCATTCCTGTAATTTTAATATCCCAGGTAGATGTTCACCCTAAGATTTGAACCCATTCCTCAAAAGTTATTATCGTTCATATTATTTGAGTAAATGTTATCAAACATTTATTATTAGCAAAGGAATAGACAAACCCAATTAGTATTTGTGGTTTCCTTTGAAAAAGAATAACAAAGCTTCAATGTACAATATCCCTTGAGAAGGGACCATTGTCCTCCAAAACAACATTAGTCGTAGCAATTTTTATACTTCAATCAAAATGATCAACCGAAAGTTGTGCCTTCAATCAATGTTATGTAACACACTCTCACATAATCAAAACAATCAACTTGCTATATGGGGTTTCTGTTGTTCTTCTGTCTTCATATATATGGTCACCTTTAAGCAAATTGTATGAAACTAAGGTTAAAGAATGTTAAGTGTAGTTTAACATAGTTGTTTTAATTTAATTTTTTTATTTTTTACATAGTAATTAAAGATTATCATAATTTTATTTTTCCAACTGTATAGGATCGTCTTCTTCTGCACGCACACAACTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAGTTGATGGTGAGTGAGCTGACTCTTTGCTCTAAACAAGTAAACAAAATTGGAATGAGATAGAATGGCATGGCCTTCTTTCATTGAACTTGAAAGAGATGATTTCACTCGAACTTACTGAGATTTTTATGTTCTAATCTCAGGTTATGAAAGTGATGGCAGTTACCAGAAAATTACGATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGATGATGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACCTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTTTGCCCCCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGATATACAGTCGATACATACATTGTATATAGAGAAGTGATTATCTCTTGATACTGAAGATTCATTGCCCCCCCTTAATCTTTATATGATTATATCACCTGAGTCCTTCTGAATA

mRNA sequence

TTTTATTAGTTCAATATTTATAGAAGTTTATATGCAAGAATTAAATTTTTAATAATGAGTCTTTTTTCTTTTTAAGTACAATAGTGAGTCTAAATTGTTGAAAATATTACTCGTGGATGACCAATAAATCTGCCAATGAATTAATATAATTTTTTTTTGTCATTTTCTATCCAATATTTGTGATGAAGCTATTTTCGATCAAAATATAAAATTGAAGTGGCTATAAATGCACGATGGTAATTAAAAATTCGAAAACCCAACTGAAAAATTGAAAGAAAAAAAACACAGCCTCCAAAATCAAGTTCCCCTCCAAGTCCCAGTAATGGAGACCAGAAGCCATAGATTTCTCATTTGAAAACGATCAAATCATGGCTTCGAATTTCATTCTTGGATTTCATTACCCAAATCCACACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTCAAATCTGCTGCAGAATAAATCGCCGCCTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCCGTTTCTGAGGGCGCCGAGGGTAGAGTTAAAGATGAGGAACTTCTCATTTCATCTTCTTCTGGATCGTCTTCTTCTGCACGCACACAACTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAGTTGATGGTTATGAAAGTGATGGCAGTTACCAGAAAATTACGATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGATGATGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACCTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTTTGCCCCCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGATATACAGTCGATACATACATTGTATATAGAGAAGTGATTATCTCTTGATACTGAAGATTCATTGCCCCCCCTTAATCTTTATATGATTATATCACCTGAGTCCTTCTGAATA

Coding sequence (CDS)

ATGGCTTCGAATTTCATTCTTGGATTTCATTACCCAAATCCACACTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCTTCAAATCTGCTGCAGAATAAATCGCCGCCTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCCGTTTCTGAGGGCGCCGAGGGTAGAGTTAAAGATGAGGAACTTCTCATTTCATCTTCTTCTGGATCGTCTTCTTCTGCACGCACACAACTTGATCTCTTGGAGCAACTCTCTTCTGGTAGCCAATTAGTTGATGGTTATGAAAGTGATGGCAGTTACCAGAAAATTACGATCCGTGATCAGCTTGCACAATTGTTCAGAGACAGAGATGATGATTTTAGCATTCCGTTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACCTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTTGCTACAGTTGGAGCATTTGTAATTTTGCCCCCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGA

Protein sequence

MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVSEGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIAILTGYVQLFP
Homology
[Close]
BLAST of Bhi09G003012 vs. TAIR 10
Match: AT2G42975.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-45
Identity = 120/181 (66.30%), Postives = 131/181 (72.38%), Query Frame = 0 

Query: 21  SSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVSEGAEGRVKDEELLISSSSGS 80
           S+ SSSS S  S   LLQ  SPP    +R  S   +  V++       D      S S S
Sbjct: 14  SNPSSSSRSKQSHHLLLQLSSPPA---TRVRSERSEIGVTDDNNNN-NDTSSSSFSGSSS 73

Query: 81  SSSARTQLDLLEQLSSGSQLVDGYESDGSYQK-ITIRDQLAQLFRDRDDDFSIPLGKNLK 140
           SSS RTQLDLLEQL+S S   DGY SDG   + +TIRDQLA L  DRDDDFSIPLGKNLK
Sbjct: 74  SSSVRTQLDLLEQLTSTS---DGYLSDGGGSRGLTIRDQLAGLVGDRDDDFSIPLGKNLK 133

Query: 141 KVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIAILTGYVQLF 200
           KVS KFLTISQKRNIKRQ+YLNEVSQRNDSVFFAT+GAFVILPP+VIL IAILTGYVQLF
Sbjct: 134 KVSPKFLTISQKRNIKRQSYLNEVSQRNDSVFFATIGAFVILPPLVILAIAILTGYVQLF 187

[Close]
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match: A0A0A0L2V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608080 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.2e-82
Identity = 176/200 (88.00%), Postives = 180/200 (90.00%), Query Frame = 0 

Query: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60
           MASNFI+GFH  NPHF          SSSSSSSSNLL NKS P KFHSRCSSSSRKFAVS
Sbjct: 1   MASNFIIGFHCSNPHF----------SSSSSSSSNLLHNKSLPFKFHSRCSSSSRKFAVS 60

Query: 61  EGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLA 120
           E AEGRV +EE LISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSY K TIRDQLA
Sbjct: 61  ESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLA 120

Query: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180
           QLFRDRDDDF++PLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI
Sbjct: 121 QLFRDRDDDFTVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180

Query: 181 LPPIVILGIAILTGYVQLFP 201
           LPPIVILGIAILTGYVQLFP
Sbjct: 181 LPPIVILGIAILTGYVQLFP 190

[Close]
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match: A0A5D3CDY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00530 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.0e-81
Identity = 176/200 (88.00%), Postives = 180/200 (90.00%), Query Frame = 0 

Query: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60
           MASNFI+GFH  NP F          SSSSSSSSNLL +KS PLKFHSRCSSSSRKFAVS
Sbjct: 1   MASNFIIGFHCSNPPF----------SSSSSSSSNLLLSKSLPLKFHSRCSSSSRKFAVS 60

Query: 61  EGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLA 120
           E AEGRV +EE LISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSY K TIRDQLA
Sbjct: 61  ESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLA 120

Query: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180
           QLFRDRDDDFS+PLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI
Sbjct: 121 QLFRDRDDDFSVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180

Query: 181 LPPIVILGIAILTGYVQLFP 201
           LPPIVILGIAILTGYVQLFP
Sbjct: 181 LPPIVILGIAILTGYVQLFP 190

[Close]
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match: A0A1S3CNU3 (uncharacterized protein LOC103503051 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503051 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.0e-81
Identity = 176/200 (88.00%), Postives = 180/200 (90.00%), Query Frame = 0 

Query: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60
           MASNFI+GFH  NP F          SSSSSSSSNLL +KS PLKFHSRCSSSSRKFAVS
Sbjct: 1   MASNFIIGFHCSNPPF----------SSSSSSSSNLLLSKSLPLKFHSRCSSSSRKFAVS 60

Query: 61  EGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLA 120
           E AEGRV +EE LISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSY K TIRDQLA
Sbjct: 61  ESAEGRVNEEEFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLA 120

Query: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180
           QLFRDRDDDFS+PLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI
Sbjct: 121 QLFRDRDDDFSVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180

Query: 181 LPPIVILGIAILTGYVQLFP 201
           LPPIVILGIAILTGYVQLFP
Sbjct: 181 LPPIVILGIAILTGYVQLFP 190

[Close]
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match: A0A6J1IYJ7 (uncharacterized protein LOC111480359 OS=Cucurbita maxima OX=3661 GN=LOC111480359 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.9e-79
Identity = 173/200 (86.50%), Postives = 176/200 (88.00%), Query Frame = 0 

Query: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60
           MASNFI  FH PNPH            SSSSS SNL QN    LKFHSRCSSSSRKFAVS
Sbjct: 1   MASNFITAFHCPNPH------------SSSSSYSNLQQNTVLLLKFHSRCSSSSRKFAVS 60

Query: 61  EGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLA 120
           EGAEGRV+DEEL ISSSSG+SSSARTQLDLLEQLSSGSQLVDGYESDG+YQK TIRDQLA
Sbjct: 61  EGAEGRVQDEELFISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQKTTIRDQLA 120

Query: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180
           QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVI
Sbjct: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVI 180

Query: 181 LPPIVILGIAILTGYVQLFP 201
           LPPIVILGIAILTGYVQLFP
Sbjct: 181 LPPIVILGIAILTGYVQLFP 188

[Close]
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match: A0A6J1C667 (uncharacterized protein LOC111008346 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008346 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73
Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 0 

Query: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60
           MA+NF++ FHYPNPH               SSSSNLLQ K+P  K HS  S SSRKFAVS
Sbjct: 1   MAANFVIAFHYPNPH---------------SSSSNLLQKKTPLSKIHSLRSYSSRKFAVS 60

Query: 61  EGAEGRVKDEEL-LISSSSG-SSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQ 120
           EGAEGRVK+EEL L SSSSG SSSSAR+QLDLLEQL+SGSQL+DGYESDGSYQ+ITIR+Q
Sbjct: 61  EGAEGRVKEEELPLTSSSSGSSSSSARSQLDLLEQLTSGSQLIDGYESDGSYQRITIREQ 120

Query: 121 LAQLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAF 180
           LAQLFRDRDDDF+IPLGKNLKKVSAKFLTISQKRNIKRQ+YLNEVSQRNDSVFFATVGAF
Sbjct: 121 LAQLFRDRDDDFTIPLGKNLKKVSAKFLTISQKRNIKRQSYLNEVSQRNDSVFFATVGAF 180

Query: 181 VILPPIVILGIAILTGYVQLFP 201
           VILPP+VILGIA+LTGYVQLFP
Sbjct: 181 VILPPLVILGIAVLTGYVQLFP 187

The following BLAST results are available for this feature:
BLAST of Bhi09G003012 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42975.12.7e-4566.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
BLAST of Bhi09G003012 vs. TAIR 10
Match NameE-valueIdentityDescription
BLAST of Bhi09G003012 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2V66.2e-8288.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G608080 PE=4 SV=1[more]
A0A5D3CDY19.0e-8188.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CNU39.0e-8188.00uncharacterized protein LOC103503051 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1IYJ74.9e-7986.50uncharacterized protein LOC111480359 OS=Cucurbita maxima OX=3661 GN=LOC111480359... [more]
A0A6J1C6671.4e-7380.20uncharacterized protein LOC111008346 isoform X1 OS=Momordica charantia OX=3673 G... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..49
NoneNo IPR availablePANTHERPTHR36742MYOSIN-G HEAVY CHAIN-LIKE PROTEINcoord: 16..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M003012Bhi09M003012mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane