Chy10G176310 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCTCCACTCGAACGAAGTATTATCAGCCTATTCTTCCCCCAATGTCAAATCTATCGGGTAGTTGTGTTCCCTCTAGCAAACACCTAAGGTTCAAGATGATTCTGCCTCAAAACCCTTTGAAAAGACTGCACAAAATCAGTAAGATTCCAAAATTCTCATATTTTGAGTCTTCTCTCTCTATGCATGAAGCCTATTTGGTACTCCCTTCTTGAATTTCTAACTCTCTTCGAGCAAGGTTTCAGATAAGACTACTTCTCCTGTCCAAGCTATTGTGACTTCTTGCGCATCATCATCTCGTCGTGCTAGGTTTCATGTTTCTGACTCTGACTCTGTTGAGACTATTGCTATTGTTTCCAACTCCACTAGTGAAGACAATATAGTTCTCTCTGAAATTTTGAAAAGGAAAGCATCTACCAATGTTTCTCCTCCTAAGAACCCAACATCTGTTAAAGGTAAGAAACCTATTATATCTCGTCCCTCAAATGTTGATGATCTATATAAAGTATTGTTTTAGATTTCCCTTTTTACCACATCAGACATCTTTCAAGTGTCCTGTCCCGGCTACTGCTCTTGTTTCATCTCATGAACAGAAATCTACTAATACCACTATTGAGGACTTGTTCACTGAATTTGCTCAAGACAGTGAGGGTCCTGGCCCTGGTGCTCATTCACACTCATCCTCTGCTGACACCTCTACTAAGTCGGCTCCTTACCAGGCTTCACATCTACCTCTATATATGATCCTCCACAG ATGATCTCCACTCGAACGAAGTATTATCAGCCTATTCTTCCCCCAATGTCAAATCTATCGGGTAGTTGTGTTCCCTCTAGCAAACACCTAAGGTTCAAGATGATTCTGCCTCAAAACCCTTTGAAAAGACTGCACAAAATCAATAAGACTACTTCTCCTGTCCAAGCTATTGTGACTTCTTGCGCATCATCATCTCGTCGTGCTAGGTTTCATGTTTCTGACTCTGACTCTGTTGAGACTATTGCTATTGTTTCCAACTCCACTAGTGAAGACAATATAGTTCTCTCTGAAATTTTGAAAAGGAAAGCATCTACCAATGTTTCTCCTCCTAAGAACCCAACATCTGTTAAAGGTAAGAAACCTATTATATCTCGTCCCTCAAATGTTGATGATCTATATAAAAAATCTACTAATACCACTATTGAGGACTTGTTCACTGAATTTGCTCAAGACAGTGAGGGTCCTGGCCCTGGTGCTCATTCACACTCATCCTCTGCTGACACCTCTACTAAGTCGGCTCCTTACCAGGCTTCACATCTACCTCTATATATGATCCTCCACAG ATGATCTCCACTCGAACGAAGTATTATCAGCCTATTCTTCCCCCAATGTCAAATCTATCGGGTAGTTGTGTTCCCTCTAGCAAACACCTAAGGTTCAAGATGATTCTGCCTCAAAACCCTTTGAAAAGACTGCACAAAATCAATAAGACTACTTCTCCTGTCCAAGCTATTGTGACTTCTTGCGCATCATCATCTCGTCGTGCTAGGTTTCATGTTTCTGACTCTGACTCTGTTGAGACTATTGCTATTGTTTCCAACTCCACTAGTGAAGACAATATAGTTCTCTCTGAAATTTTGAAAAGGAAAGCATCTACCAATGTTTCTCCTCCTAAGAACCCAACATCTGTTAAAGGTAAGAAACCTATTATATCTCGTCCCTCAAATGTTGATGATCTATATAAAAAATCTACTAATACCACTATTGAGGACTTGTTCACTGAATTTGCTCAAGACAGTGAGGGTCCTGGCCCTGGTGCTCATTCACACTCATCCTCTGCTGACACCTCTACTAAGTCGGCTCCTTACCAGGCTTCACATCTACCTCTATATATGATCCTCCACAG MISTRTKYYQPILPPMSNLSGSCVPSSKHLRFKMILPQNPLKRLHKINKTTSPVQAIVTSCASSSRRARFHVSDSDSVETIAIVSNSTSEDNIVLSEILKRKASTNVSPPKNPTSVKGKKPIISRPSNVDDLYKKSTNTTIEDLFTEFAQDSEGPGPGAHSHSSSADTSTKSAPYQASHLPLYMILHX Homology
BLAST of Chy10G176310 vs. ExPASy TrEMBL
Match: A0A5A7SV86 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00470 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 65/185 (35.14%), Postives = 102/185 (55.14%), Query Frame = 0
BLAST of Chy10G176310 vs. ExPASy TrEMBL
Match: A0A5A7UBA4 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00390 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 60/181 (33.15%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of Chy10G176310 vs. ExPASy TrEMBL
Match: A0A5D3BFA1 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00410 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 60/181 (33.15%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of Chy10G176310 vs. ExPASy TrEMBL
Match: A0A5D3BAD6 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002360 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05 Identity = 54/150 (36.00%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Chy10G176310 vs. ExPASy TrEMBL
Match: A0A5D3D2R5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1327G00250 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05 Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of Chy10G176310 vs. NCBI nr
Match: KAA0033876.1 (uncharacterized protein E6C27_scaffold43059G00610 [Cucumis melo var. makuwa] >TYK01260.1 uncharacterized protein E5676_scaffold49G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 1.64e-17 Identity = 65/185 (35.14%), Postives = 102/185 (55.14%), Query Frame = 0
BLAST of Chy10G176310 vs. NCBI nr
Match: TYJ97943.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 3.51e-11 Identity = 60/181 (33.15%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of Chy10G176310 vs. NCBI nr
Match: KAA0051667.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 3.54e-11 Identity = 60/181 (33.15%), Postives = 85/181 (46.96%), Query Frame = 0
BLAST of Chy10G176310 vs. NCBI nr
Match: KAA0032272.1 (uncharacterized protein E6C27_scaffold219G001100 [Cucumis melo var. makuwa] >TYK17076.1 uncharacterized protein E5676_scaffold1327G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 58.2 bits (139), Expect = 4.98e-07 Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of Chy10G176310 vs. NCBI nr
Match: KAA0036860.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYJ95924.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]) HSP 1 Score: 59.7 bits (143), Expect = 9.64e-07 Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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