Chy4G087400 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTCCCGGCAGGCGCAACGGCGTCGTAGACGAAGACGATTACGAGGAAGACAATGCTCTCTTTGAAGAGGACGGTGTTATTGAATTCGATTCCGATACGCCCCCTCACCTCCGCCCCCTAGCTACCGCCGCCCAGCTCGGCGACGTTGATGGCCTTCGCACCGCTCTAGGTTCAACTTCTTCCTTCTACTCTCGCACTGCAATTCTTTACAAGTTCTATTGCTACATTTTTCTCTTAATCACTCTGGAGTATCTACTGTCCTGATTAGGTCGAGACGATCTTTTTTAGCTATTTCGATTCAGTTTATACATTTGTAAACTTGGTAGTTTCAAGTAATGCATGATTGGTTTTATTTTTTTTATCTCAATTGTGGTGAGAGGTAGTTGTCTTAATAGGAACTCCTCTTTTGGTTTATGACAATTTACATCTCAGAATCAGTTGCATTAAGAGGAACCTACTTGTAATTCATCTGAAGAAGTGGTTTACATTTTAAGATATTCTGATTTCATACCGCCAGTGTCATTCATATCCATTCTCTTTACTCTAAGTAGTATGAATGAGGGTCCCTGGTTTCAATTTTGTTGGAGCCCTTTTCTAGTTTTGAGTTTAATGTTCACGTTTTAACCAAATGTTGCTCCCCTTATCGGCTTTCTTGCAGTTAACTTAACGGTGGGAAGTATAAATGACGCTGTGGAAGATGGGGATACTGCTCTTCACCTTACCTGTCTCTATGGCCATCTGCCATGTGTTCGGGTTGGCTACTCTATGCATCCTTTAGCAAATTTAATTTGAATTTTCTCTGATATGTGGCTTATCTTTTAAGTAAATTAATGTTAATGTAGTTGCTGCTTGAAAGAGGGGCAGCCTTGGAGGTTCAAGATGAAGATGGTGCCATTCCTTTGCATGATGCTTGTGCAGGGGGTGAGTAGGCTGACTTATGAGTACTTTTCCCTTTTCAGCACACACTATTAAAAGATTTTTCTCTTTGAAATTTGGTTGAATAATTTTTGTTTCCTTTTTACTCCAATGATCTGTGAAGGTTTTGTAGAGATTGTTCAACTCCTAATAAACAGTGCTAACGACACAGAGTGCGTGAAGAGGATGCTAGAATCAGTTGATGCGGAAGGTGACACTGTAAGTAGCTGGTTATCTTCGGTGTCTAAATTGTATTTTTTTCCATAAGAGATACTCGTTAAACGATAAGTATTTAGATTTTTGTTTTTTGAAAATTAAGCTAACACTTGTTCCTCCTATTGATTTATTTGTTTTATTATCTATTTTTTAGGAGTGTTTTAAAAAATCAAGCTAAAATTTTAAGAACTTACAAAAGAGAGTAAAAGGTTTTTAAATTTTGATTTTGTTTTGTTTTTTTAAAATTCGACTAAAATTTCAAATATTCAGTTAGTAAACATGAAATCTGTGATAAAGAAGTGGTGAAAATGCTAGCACGTTTCAAAAACAAAAAGGCAAATGGGTATAAAATGAAAACTTACTAGAATTCCACTCTAACTTATAAAACGGTAATGGAGTGGTAATTAGTTTCAATAATCTCATTGCAATCTTGAAAATTATTTGTACAGCCTCTTCATCATGCTGCAAGAGGTGAGCATGCCGCAGTTGTAAGGTTACTGCTAGCTTCAGGCGCATCTCCCACAAAGCGAAATACATACGGGAAGGTTTGTGTAGAAACTTCATCTTTCTTGTATTTTGGCAGTACTCATTTTGTAAATATTGTAATGCTTTATTTGTTAACAACAGACCCCAACTGAGCTTCCGGATCCAGGGACAGAGGCCAGGGCAATTTTGGAAGCTGCTGCTTCTACCCACATGGCGATGGGGTGTCAGTAG ATGGCGGTTCCCGGCAGGCGCAACGGCGTCGTAGACGAAGACGATTACGAGGAAGACAATGCTCTCTTTGAAGAGGACGGTGTTATTGAATTCGATTCCGATACGCCCCCTCACCTCCGCCCCCTAGCTACCGCCGCCCAGCTCGGCGACGTTGATGGCCTTCGCACCGCTCTAGTTAACTTAACGGTGGGAAGTATAAATGACGCTGTGGAAGATGGGGATACTGCTCTTCACCTTACCTGTCTCTATGGCCATCTGCCATGTGTTCGGTTGCTGCTTGAAAGAGGGGCAGCCTTGGAGGTTCAAGATGAAGATGGTGCCATTCCTTTGCATGATGCTTGTGCAGGGGGTTTTGTAGAGATTGTTCAACTCCTAATAAACAGTGCTAACGACACAGAGTGCGTGAAGAGGATGCTAGAATCAGTTGATGCGGAAGGTGACACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCCGCAGTTGTAAGGTTACTGCTAGCTTCAGGCGCATCTCCCACAAAGCGAAATACATACGGGAAGACCCCAACTGAGCTTCCGGATCCAGGGACAGAGGCCAGGGCAATTTTGGAAGCTGCTGCTTCTACCCACATGGCGATGGGGTGTCAGTAG ATGGCGGTTCCCGGCAGGCGCAACGGCGTCGTAGACGAAGACGATTACGAGGAAGACAATGCTCTCTTTGAAGAGGACGGTGTTATTGAATTCGATTCCGATACGCCCCCTCACCTCCGCCCCCTAGCTACCGCCGCCCAGCTCGGCGACGTTGATGGCCTTCGCACCGCTCTAGTTAACTTAACGGTGGGAAGTATAAATGACGCTGTGGAAGATGGGGATACTGCTCTTCACCTTACCTGTCTCTATGGCCATCTGCCATGTGTTCGGTTGCTGCTTGAAAGAGGGGCAGCCTTGGAGGTTCAAGATGAAGATGGTGCCATTCCTTTGCATGATGCTTGTGCAGGGGGTTTTGTAGAGATTGTTCAACTCCTAATAAACAGTGCTAACGACACAGAGTGCGTGAAGAGGATGCTAGAATCAGTTGATGCGGAAGGTGACACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCCGCAGTTGTAAGGTTACTGCTAGCTTCAGGCGCATCTCCCACAAAGCGAAATACATACGGGAAGACCCCAACTGAGCTTCCGGATCCAGGGACAGAGGCCAGGGCAATTTTGGAAGCTGCTGCTTCTACCCACATGGCGATGGGGTGTCAGTAG MAVPGRRNGVVDEDDYEEDNALFEEDGVIEFDSDTPPHLRPLATAAQLGDVDGLRTALVNLTVGSINDAVEDGDTALHLTCLYGHLPCVRLLLERGAALEVQDEDGAIPLHDACAGGFVEIVQLLINSANDTECVKRMLESVDAEGDTPLHHAARGEHAAVVRLLLASGASPTKRNTYGKTPTELPDPGTEARAILEAAASTHMAMGCQ* Homology
BLAST of Chy4G087400 vs. ExPASy Swiss-Prot
Match: Q9VBP3 (Poly [ADP-ribose] polymerase tankyrase OS=Drosophila melanogaster OX=7227 GN=Tnks PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.5e-16 Identity = 56/167 (33.53%), Postives = 83/167 (49.70%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy Swiss-Prot
Match: Q3UES3 (Poly [ADP-ribose] polymerase tankyrase-2 OS=Mus musculus OX=10090 GN=Tnks2 PE=2 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 6.0e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy Swiss-Prot
Match: Q9H2K2 (Poly [ADP-ribose] polymerase tankyrase-2 OS=Homo sapiens OX=9606 GN=TNKS2 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.8e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy Swiss-Prot
Match: Q9TU71 (Ankyrin repeat domain-containing protein 1 OS=Oryctolagus cuniculus OX=9986 GN=ANKRD1 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15 Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy Swiss-Prot
Match: Q99728 (BRCA1-associated RING domain protein 1 OS=Homo sapiens OX=9606 GN=BARD1 PE=1 SV=2) HSP 1 Score: 82.4 bits (202), Expect = 6.6e-15 Identity = 44/139 (31.65%), Postives = 77/139 (55.40%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy TrEMBL
Match: A0A0A0LAM8 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G743420 PE=4 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.3e-111 Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy TrEMBL
Match: A0A5D3DNG9 (Tankyrase-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002930 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy TrEMBL
Match: A0A1S3B6E0 (tankyrase-2 OS=Cucumis melo OX=3656 GN=LOC103486520 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy TrEMBL
Match: A0A6J1CTX1 (tankyrase-2 OS=Momordica charantia OX=3673 GN=LOC111014248 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 3.7e-101 Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 0
BLAST of Chy4G087400 vs. ExPASy TrEMBL
Match: A0A6J1J6D4 (tankyrase-2 OS=Cucurbita maxima OX=3661 GN=LOC111481754 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 4.1e-100 Identity = 187/209 (89.47%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of Chy4G087400 vs. NCBI nr
Match: XP_004137846.1 (poly [ADP-ribose] polymerase tankyrase [Cucumis sativus] >KGN59005.1 hypothetical protein Csa_001920 [Cucumis sativus]) HSP 1 Score: 411 bits (1057), Expect = 1.02e-144 Identity = 205/209 (98.09%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Chy4G087400 vs. NCBI nr
Match: XP_008442731.1 (PREDICTED: tankyrase-2 [Cucumis melo] >KAA0043973.1 tankyrase-2 [Cucumis melo var. makuwa] >TYK25167.1 tankyrase-2 [Cucumis melo var. makuwa]) HSP 1 Score: 411 bits (1056), Expect = 1.44e-144 Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
BLAST of Chy4G087400 vs. NCBI nr
Match: XP_038905294.1 (poly [ADP-ribose] polymerase tankyrase [Benincasa hispida]) HSP 1 Score: 395 bits (1014), Expect = 3.53e-138 Identity = 198/209 (94.74%), Postives = 201/209 (96.17%), Query Frame = 0
BLAST of Chy4G087400 vs. NCBI nr
Match: XP_022144606.1 (tankyrase-2 [Momordica charantia]) HSP 1 Score: 377 bits (968), Expect = 3.63e-131 Identity = 187/209 (89.47%), Postives = 199/209 (95.22%), Query Frame = 0
BLAST of Chy4G087400 vs. NCBI nr
Match: XP_022983109.1 (tankyrase-2 [Cucurbita maxima]) HSP 1 Score: 374 bits (959), Expect = 8.54e-130 Identity = 187/209 (89.47%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of Chy4G087400 vs. TAIR 10
Match: AT3G09890.1 (Ankyrin repeat family protein ) HSP 1 Score: 259.2 bits (661), Expect = 2.8e-69 Identity = 131/205 (63.90%), Postives = 160/205 (78.05%), Query Frame = 0
BLAST of Chy4G087400 vs. TAIR 10
Match: AT3G09890.2 (Ankyrin repeat family protein ) HSP 1 Score: 188.3 bits (477), Expect = 6.1e-48 Identity = 94/149 (63.09%), Postives = 118/149 (79.19%), Query Frame = 0
BLAST of Chy4G087400 vs. TAIR 10
Match: AT2G25600.1 (Shaker pollen inward K+ channel ) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11 Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 0
BLAST of Chy4G087400 vs. TAIR 10
Match: AT5G40160.1 (Ankyrin repeat family protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11 Identity = 55/185 (29.73%), Postives = 84/185 (45.41%), Query Frame = 0
BLAST of Chy4G087400 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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