Chy4G074990 (gene) Cucumber (hystrix) v1

Overview
NameChy4G074990
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 9974063 .. 9974891 (+)
RNA-Seq ExpressionChy4G074990
SyntenyChy4G074990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTCGCCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCCTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCTGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCACCGATCTGCCCCGATTGGCTTTCCTTCGTTCTCGGTGCTTCCTATCGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCTCATTGCCAACGTTCTTCGTAACTTAGCTAACCCTCTCTCTCCTGAATAATCCTTGTCTACCACTACCATCTGTGGCTGGCTCTCTTCTCATTACTTCATTCAAGGTATTCCTCTTCTTTCGTATTTCGTTTTCATTTTATCTCTACTCTCTTTCTCTCTTTAAATTATTTATTTAGGAAATAAAATACCCTTTCATCGTAGGTACGCATCTTCCTTCTCTTGATCCGGTGGTTGACACCACGTTGACTGAATGTGATGCTTCCCTTGACCACGAGGAAGGATGAGAATCCGATTTGGGTGTGTTCCTATTAGTTCTCATACTAAACTAGTTTCTGCCGCTAAAGTGAAGTCTGAATTATATTTTCTTTTGCCTTGCAATTTATTAAATTTGTATATTGAGAGACTTTTAATAAAAAAAATTAACTTGATAGCTCCTTTATTGTGGTTAATTTCTACAAATTAACACTCTTCAGATTGTCAAATTCTCTACTTTCCTCTACTCTCACTTCATATTGTAACGAGAAGCACACTTCGGTTTGTAGCTTGCTTGGTGTTGTTTGA

mRNA sequence

ATGTCTCTCTCGCCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCCTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCTGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCACCGATCTGCCCCGATTGGCTTTCCTTCGTTCTCGGTGCTTCCTATCGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCTCATTGCCAACGTTCTTCGTAACTTAGCTAACCCTCTCTCTCCTGAATAATCCTTGTCTACCACTACCATCTGTGGCTGGCTCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGTGGTTGACACCACGTTGACTGAATGTGATGCTTCCCTTGACCACGAGGAAGGATTGTCAAATTCTCTACTTTCCTCTACTCTCACTTCATATTGTAACGAGAAGCACACTTCGGTTTGTAGCTTGCTTGGTGTTGTTTGA

Coding sequence (CDS)

ATGTCTCTCTCGCCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCCTCCTCACCTCTTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCTGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCATCCTCGTTCACCGATCTGCCCCGATTGGCTTTCCTTCGTTCTCGGTGCTTCCTATCGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCTCATTGCCAACGTTCTTCGTAACTTAGCTAACCCTCTCTCTCCTGAATAATCCTTGTCTACCACTACCATCTGTGGCTGGCTCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGGTGGTTGACACCACGTTGACTGAATGTGATGCTTCCCTTGACCACGAGGAAGGATTGTCAAATTCTCTACTTTCCTCTACTCTCACTTCATATTGTAACGAGAAGCACACTTCGGTTTGTAGCTTGCTTGGTGTTGTTTGA

Protein sequence

MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRILVHRSAPIGFPSFSVLPIGFLCLLIPIYLSLPTFFVT*LTLSLLNNPCLPLPSVAGSLLITSFKVRIFLLLIRWLTPR*LNVMLPLTTRKDCQILYFPLLSLHIVTRSTLRFVACLVLFX
Homology
[Close]
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match: A0A0A0K9L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.7e-25
Identity = 65/71 (91.55%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MSLS LSKPKSLTLTLNLL PHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 72
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match: A0A1S3CC43 (uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 72
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match: A0A5A7VD84 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00450 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 72
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match: A0A1S3CBN8 (uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 72
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match: A0A1S3CC81 (uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499150 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.0e-22
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 72
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. NCBI nr
Match: XP_004135962.1 (uncharacterized protein LOC101214133 [Cucumis sativus])

HSP 1 Score: 124 bits (311), Expect = 1.33e-32
Identity = 65/71 (91.55%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MSLS LSKPKSLTLTLNLL PHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 71
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. NCBI nr
Match: KAE8646378.1 (hypothetical protein Csa_015587 [Cucumis sativus])

HSP 1 Score: 124 bits (311), Expect = 2.95e-32
Identity = 65/71 (91.55%), Postives = 65/71 (91.55%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MSLS LSKPKSLTLTLNLL PHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSLSALSKPKSLTLTLNLLRPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 71
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. NCBI nr
Match: XP_008460275.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo])

HSP 1 Score: 116 bits (290), Expect = 9.44e-30
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 71
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. NCBI nr
Match: XP_008460274.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo])

HSP 1 Score: 116 bits (290), Expect = 1.03e-29
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 71
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

[Close]
BLAST of Chy4G074990 vs. NCBI nr
Match: XP_008460271.1 (PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460272.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_008460273.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >KAA0065598.1 uncharacterized protein E6C27_scaffold90G00420 [Cucumis melo var. makuwa] >TYK07168.1 uncharacterized protein E5676_scaffold606G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (290), Expect = 1.94e-29
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0 

Query: 1  MSLSPLSKPKSLTLTLNLLPPHLFRRPFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60
          MS S LSKPKSL LTLNLL PH+FRR FSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI
Sbjct: 1  MSRSSLSKPKSLALTLNLLRPHIFRRTFSSPSDHDLTDLPESPSSSDPLLRNLEDAIQRI 60

Query: 61 LVHRSAPIGFP 71
          LV RSAP   P
Sbjct: 61 LVRRSAPDWLP 71

The following BLAST results are available for this feature:
BLAST of Chy4G074990 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G074990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9L93.7e-2591.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1[more]
A0A1S3CC431.0e-2285.92uncharacterized protein LOC103499150 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7VD841.0e-2285.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CBN81.0e-2285.92uncharacterized protein LOC103499150 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CC811.0e-2285.92uncharacterized protein LOC103499150 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of Chy4G074990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135962.11.33e-3291.55uncharacterized protein LOC101214133 [Cucumis sativus][more]
KAE8646378.12.95e-3291.55hypothetical protein Csa_015587 [Cucumis sativus][more]
XP_008460275.19.44e-3085.92PREDICTED: uncharacterized protein LOC103499150 isoform X3 [Cucumis melo][more]
XP_008460274.11.03e-2985.92PREDICTED: uncharacterized protein LOC103499150 isoform X2 [Cucumis melo][more]
XP_008460271.11.94e-2985.92PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo] >XP_00... [more]
BLAST of Chy4G074990 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G074990.1Chy4G074990.1mRNA