Chy3G058950 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATATTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAACAAAACAGTCAAATGCTAGCGGTAATTTTAAATCTGCTTCTATCTGTCTTGAGTTTCCATTGTATCACTTGCTCATGGGAAAATAGTAACCTAGAAACTAAATTTAATACTTGGAATGCGTTTTTTTTTTTTTTTTTCAGGAACTGAATTCAAGTAAAGATCGGGTGAGATAAATTTCTGTAATCTGAAATTTGATTTAGTTTGCACATCAAACTCCCTTTAGGTTGCTGCAACGGAAACTAATTATATTTTATGCAGTTAAAAAGCGCTTCAGCATGAGCTTGGATGTAAAAATGGCATTCTTATGTCCAGAAAGCTGGATTTGGAGGTTACTTCGATTCCTTTTAGTCATTTCAAAGTTGCAATTGAGTGTATTGATTACTGACACTGAAATTTTCTTCCCAGAGTAAAGGGAAATCAGCAACAATTCAACCTGGAGAGGTGCATTAAACAATACTATTGTTATTCTTTAGTATATTTCTTAGGTTACTTACGCATTTCTTTTCTCTACCTCAAGGTAGGGACCACCGAATGTAATGAGGCAGAGGAATCTACAACTGCAAATCAGGATAACAGGCCTTGCAAATCTTAACAGGCGACGGCAATCCAGACGACAATGTAATTGACAGTGCACTAATTACCTTCAGCTTCAAGATATACATATTGTCGTTTTTTGAAAACCAATTCTCTTCTGAGTGCAGCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGCAAAAGGTTTTTTTTCGTGGATTTTTGCTTTATTTGGGTTTATCTGATTTTAGCATATTAAAGATAAATCAACCATGATCTTGGTTTAATTCTGATAGGCCTTGTTTGAGACAGCAGCCTGCAAAGTTCAAAACCGAGGAACCTCTGGCTGCCAATGATATCTTGGAAACAGAAATTTCCAATTCTAATGATGCTTCTCAATGTAAAGAAACTTCAGTTCTACAAACAGAGGTGGAAAAGGTTGAAAGCAAGAGGTTAGTGGCATGGATATTTAGTTGCTTTATTTGGGTTTTGTTTTCAGGATGTGCTCAAAATGATATAGCATAAGTACATACTGAACATTAGCTTCATTGAAATTTTCAATAGGCCTTGTTCGCGAAGGCAGTCTGCAAGATTCAAAGCTGAGGAACCAGTTACTACAAATGACTTACACCAAATGGAAACTTCGGATTCTACCAATGCTTCTCAATGCCAGGAGACATCAGTTCTTCAAGCAGAGAATCTGAAGGTTGAAGGCAAAAGGTCCGTTCGTGGATATTTAATTGCTTTGTTTGGCTTCATTTCTAAAAACTATTCCAGATAATATAGCATACACGAGATCAATTGACATGAGCTTTACTGACTTTCTTATCAGGCCTTGTTTGAGAAGGCAGTCTACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCCAATTCAACCAGTCCTGCTTTTCCATGCAAAGAGACCAAGTGTAAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGGCAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGGAGGACATCTTTGGTAGACCGTCAAGGCGAGCTGCTGAGAAAGTTATCTCCTATAAGGAAATTCCACTTAATGTCAAGATGCGCAGACAGGTATGATTAATCCTAACCAAAATTGCTTCGTCCTGTTGTCTAGAGGAGAGATTTGTGATATTAGTAGATATTGAAGACAAGACTGCAACACTAGTTTTGTATCTGTATTCTTTGATAGATTAGATTCTGCTCGTACTGTAAAAAGCTCTAGTTTGCTTCCTTGTACCTTAAGACTTAAATGA TCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATATTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAACAAAACAGTCAAATGCTAGCGGTTACTTACGCATTTCTTTTCTCTACCTCAAGGCCTTGCAAATCTTAACAGGCGACGGCAATCCAGACGACAATGTAATTGACAGTGCACTAATTACCTTCAGCTTCAAGATATACATATTGTCGTTTTTTGAAAACCAATTCTCTTCTGAGTGCAGCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGCAAAAGGCCTTGTTTGAGACAGCAGCCTGCAAAGTTCAAAACCGAGGAACCTCTGGCTGCCAATGATATCTTGGAAACAGAAATTTCCAATTCTAATGATGCTTCTCAATGTAAAGAAACTTCAGTTCTACAAACAGAGGTGGAAAAGGTTGAAAGCAAGAGGCCTTGTTCGCGAAGGCAGTCTGCAAGATTCAAAGCTGAGGAACCAGTTACTACAAATGACTTACACCAAATGGAAACTTCGGATTCTACCAATGCTTCTCAATGCCAGGAGACATCAGTTCTTCAAGCAGAGAATCTGAAGGTTGAAGGCAAAAGGCCTTGTTTGAGAAGGCAGTCTACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCCAATTCAACCAGTCCTGCTTTTCCATGCAAAGAGACCAAGTGTAAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGGCAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGGAGGACATCTTTGGTAGACCGTCAAGGCGAGCTGCTGAGAAAGTTATCTCCTATAAGGAAATTCCACTTAATGTCAAGATGCGCAGACAGATTAGATTCTGCTCGTACTGTAAAAAGCTCTAGTTTGCTTCCTTGTACCTTAAGACTTAAATGA TCGCATAATTGAGATAAGTGGAAATGAGTTAGAGAAATTGAGAACCAATATTCAGAAATTGCAGCAGCAGAACATGCAACTTGCCCAAACAAAACAGTCAAATGCTAGCGGTTACTTACGCATTTCTTTTCTCTACCTCAAGGCCTTGCAAATCTTAACAGGCGACGGCAATCCAGACGACAATGTAATTGACAGTGCACTAATTACCTTCAGCTTCAAGATATACATATTGTCGTTTTTTGAAAACCAATTCTCTTCTGAGTGCAGCTTTTGGCACGTCAAGTCTTCAGACAGAAGTTCCAAAGATCGAAGCAAAAGGCCTTGTTTGAGACAGCAGCCTGCAAAGTTCAAAACCGAGGAACCTCTGGCTGCCAATGATATCTTGGAAACAGAAATTTCCAATTCTAATGATGCTTCTCAATGTAAAGAAACTTCAGTTCTACAAACAGAGGTGGAAAAGGTTGAAAGCAAGAGGCCTTGTTCGCGAAGGCAGTCTGCAAGATTCAAAGCTGAGGAACCAGTTACTACAAATGACTTACACCAAATGGAAACTTCGGATTCTACCAATGCTTCTCAATGCCAGGAGACATCAGTTCTTCAAGCAGAGAATCTGAAGGTTGAAGGCAAAAGGCCTTGTTTGAGAAGGCAGTCTACAAGATTCAAACTCGAGGAACCAGTGGCCACCAAAGACTCACTTGAGATTGAAAATTCCAATTCAACCAGTCCTGCTTTTCCATGCAAAGAGACCAAGTGTAAAGTTGTTCCAACTTCATCAGTAGGAAAAGAAGATTATGGCAATTCTATTGATAGATCAGAAGTTCAAGAATGTCGGAGGACATCTTTGGTAGACCGTCAAGGCGAGCTGCTGAGAAAGTTATCTCCTATAAGGAAATTCCACTTAATGTCAAGATGCGCAGACAGATTAGATTCTGCTCGTACTGTAAAAAGCTCTAGTTTGCTTCCTTGTACCTTAAGACTTAAATGA SHN*DKWK*VREIENQYSEIAAAEHATCPNKTVKC*RLLTHFFSLPQGLANLNRRRQSRRQCN*QCTNYLQLQDIHIVVF*KPILF*VQLLARQVFRQKFQRSKQKALFETAACKVQNRGTSGCQ*YLGNRNFQF**CFSM*RNFSSTNRGGKG*KQEALFAKAVCKIQS*GTSYYK*LTPNGNFGFYQCFSMPGDISSSSRESEG*RQKALFEKAVYKIQTRGTSGHQRLT*D*KFQFNQSCFSMQRDQV*SCSNFISRKRRLWQFY**IRSSRMSEDIFGRPSRRAAEKVISYKEIPLNVKMRRQIRFCSYCKKL*FASLYLKT*MX Homology
BLAST of Chy3G058950 vs. ExPASy Swiss-Prot
Match: E3VXF2 (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.3e-05 Identity = 21/25 (84.00%), Postives = 25/25 (100.00%), Query Frame = 0
BLAST of Chy3G058950 vs. ExPASy TrEMBL
Match: A0A0A0LMD0 (Shugoshin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G326470 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.0e-04 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of Chy3G058950 vs. NCBI nr
Match: KZV48033.1 (hypothetical protein F511_21454 [Dorcoceras hygrometricum]) HSP 1 Score: 53.1 bits (126), Expect = 1.26e-04 Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of Chy3G058950 vs. NCBI nr
Match: XP_038884301.1 (SHUGOSHIN 2 [Benincasa hispida]) HSP 1 Score: 55.1 bits (131), Expect = 2.55e-04 Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of Chy3G058950 vs. NCBI nr
Match: XP_031736418.1 (SHUGOSHIN 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 54.7 bits (130), Expect = 3.22e-04 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of Chy3G058950 vs. NCBI nr
Match: XP_011649425.1 (SHUGOSHIN 2 isoform X1 [Cucumis sativus] >KGN62194.1 hypothetical protein Csa_006836 [Cucumis sativus]) HSP 1 Score: 54.7 bits (130), Expect = 3.39e-04 Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0
BLAST of Chy3G058950 vs. NCBI nr
Match: XP_008456542.1 (PREDICTED: shugoshin-1 isoform X2 [Cucumis melo]) HSP 1 Score: 53.5 bits (127), Expect = 7.56e-04 Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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