Chy3G051980 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT GCTTCTCCTAGCTACTTCATATAGCATCCAATTCCTTTTCCCTCCAATTGTCATTATTATATATCAATCAAATTCATCTGCTTTGGATCTTGAAATCCGATTCTTAGATCTGTGGAAACAAAGAAAGAGAATCTCATTTTCATATATCAATTTTGGGCTTTCAAGATGAAAACTCAAAACTACGACCAAATCTCTCAAAAATCTTTCCAAATTACCAAACATGAAGGTAGATTCTTCACTAGAGCTCTATCCAAAGAGCTCAATTCCACCACCAACTCCTCTTTTCGAGTCTATTACGGCGGTGCCACCGGTGCAATTCCGTTCCGATGGGAGTCCCGACCGGGAACTCCAAAGCATACTTTTTCAGACACTTCAATCCCTCCTCTTACTCCTCCTCCTTCTTACTTTTCCTCTTCACATTCTACTTCCAAAGCTTCTTCCAAACCAACCCTTTTGAGCTCAATTTTTCCTCGGCTTACACCGAGGAAATCTCGAACTTCCCCGTCTTTCTCCTCCTCTTCTGGCTCCCCCTCCTCGTCCTCTTCATTAGCTTCGTGGTCATCCTCTTTCTCATCCTCCTCCTCATCTCCCTCGCCTTTCGTTAGACCTAAATTCTTCAAACGTCGTCGTCGATTCTCGGATATTCCAAGCGTACCCTTTGAGTATAGCTTTGACGATAAAGACGGAGACGAGGTGGTGGCCGGGAGTGCTCCGAATTCTCCTACTTCAATTTTGTGCTTTGGTGGTGGTTCTTCAAGTAGAGCTACATTGTTTGGAGGTTGTTATCAGTTAGTGAGTGTGAAGAATGCTTTGTTGTCCATTGTTGGCCATGGATCTGCAAGTAGAGGTACTCTTAATGATTAGTTGTGTGAATGAAATTAGTTAAATTCTCATAAGTTTTTTTTTTCCTTTTTGGGTTCAATCTTTCTCTCATTGTGTATTTGTGTTTGTGGAGTGAAATGTTATATTATATGGAACAGAAGTTCTTGAATTGATGTTTATTTGAGCTATTAGGGCTCAAATTAAACATTAAATTTCTTGAATGTGGCATATCTCATGTCAAATTATAACAAAAAAATCAAAACATTTTTAGTTTTTGTTT ASPSYFI*HPIPFPSNCHYYISIKFICFGS*NPILRSVETKKENLIFIYQFWAFKMKTQNYDQISQKSFQITKHEGRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSPSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFSDIPSVPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSSRATLFGGCYQLVSVKNALLSIVGHGSASRGTLND*LCE*N*LNSHKFFFSFLGSIFLSLCICVCGVKCYIIWNRSS*IDVYLSY*GSN*TLNFLNVAYLMSNYNKKIKTFLVFVX Homology
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 4.6e-115 Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 6.2e-112 Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 6.2e-112 Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A6J1BX95 (Uncharacterized protein OS=Momordica charantia OX=3673 GN=LOC111006479 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74 Identity = 171/234 (73.08%), Postives = 187/234 (79.91%), Query Frame = 0
BLAST of Chy3G051980 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 3.2e-68 Identity = 155/201 (77.11%), Postives = 165/201 (82.09%), Query Frame = 0
BLAST of Chy3G051980 vs. NCBI nr
Match: XP_011656432.1 (putative protein TPRXL [Cucumis sativus]) HSP 1 Score: 426 bits (1095), Expect = 1.81e-147 Identity = 225/232 (96.98%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of Chy3G051980 vs. NCBI nr
Match: KAE8646577.1 (hypothetical protein Csa_005771 [Cucumis sativus]) HSP 1 Score: 417 bits (1073), Expect = 5.36e-144 Identity = 221/228 (96.93%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of Chy3G051980 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo] >KAA0052017.1 putative serine-rich protein [Cucumis melo var. makuwa]) HSP 1 Score: 416 bits (1068), Expect = 2.40e-143 Identity = 223/233 (95.71%), Postives = 226/233 (97.00%), Query Frame = 0
BLAST of Chy3G051980 vs. NCBI nr
Match: XP_038885974.1 (putative protein TPRXL [Benincasa hispida]) HSP 1 Score: 383 bits (983), Expect = 1.87e-130 Identity = 208/232 (89.66%), Postives = 215/232 (92.67%), Query Frame = 0
BLAST of Chy3G051980 vs. NCBI nr
Match: XP_022134140.1 (putative protein TPRXL [Momordica charantia]) HSP 1 Score: 292 bits (747), Expect = 9.06e-95 Identity = 171/234 (73.08%), Postives = 187/234 (79.91%), Query Frame = 0
BLAST of Chy3G051980 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 5.7e-17 Identity = 83/210 (39.52%), Postives = 114/210 (54.29%), Query Frame = 0
BLAST of Chy3G051980 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 8.0e-11 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Chy3G051980 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). ) HSP 1 Score: 62.8 bits (151), Expect = 6.8e-10 Identity = 76/179 (42.46%), Postives = 91/179 (50.84%), Query Frame = 0
BLAST of Chy3G051980 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 3.7e-08 Identity = 54/128 (42.19%), Postives = 73/128 (57.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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