CmaCh13G006280 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAATTAAAAAAAAAAAAAAAAAAAAGAGTTTGGGGCCATTATTGAGTGGGCTGAAGCCCAAAACTAGAACTGGTAAGGGGAAGAAAGGAAGAACCGGTAATTACCGGTTCCCGTAGCTGGAAGGAAACGGCTACTGGCATCTCGCAAACCGACCAGGCATGACAAAGTTTCAAGTTCGTTATTTTGATTTTGTCTGGAGGAGAGGGGGATGAATATTTGCGTATGAGTCTGGTGAGAGCTTAGGTCTTCAATTTGGGATTCTTCTAGGGTTTTAATGGGTAGGGTTTTTCTTGTTGAATTGGAAGGCAGGTCTTACAGATGCCGCTTCTGTAATAACAATGTTGCTCTTGCCGATGACGTCCTTTCTCGGGTACTCTCACTCTTTACCTCTTCCGTTTTATTTTTCTCTGCGAATTCTCTCAACTCCTTTCTTCGTTTCCATCGACTAATTTCGCCCATACATGCTACAATTTTGTTCGTTGAAATTCTGGAATTCAATTTCTCAACAATCTGAACCGAAAACGGGAGTTTTAGTCCTCGAATTATAGGTTTGCGTCAAGATGGACTGTTTTTCCTTGTATTAGCGTTATGCGTTCTTTGTTCAATCGTTCTTTCCTGATTTTTGTTTTGTTTTTTGAGCCAAGCATTCTTAATTGAAATATCAAGCATATTCTGGGTGTGGTTAATTTGTCCCTTGTCGCTATGTAATATGACGCTACTGAGTCTTAAATGCTATGTTGGAAGTGAAATTCCAACAATATTACGATCGATTTCCTTTTGAATCTTTTCCATTGCATTTTCGACTTGCCCATTTTGATGAATTTTTATTGTTCTCTTATTGTCCCAGACTTTCAATTGCAGCCAAGGGAGGGCATATCTTTTCAGCAATGTGTAAGTGGCCCTGATTTTATTTTTATGTGCAGCTTCAAATCCAAATGTCTAGATTTTTTTGAGGAACCATTGGATGAGGACTTCTGTAAGAGGAGGAGAATTGATTGACTTCCCTTTAAATTCTGTTTTCCTTATTTGAGAACAATTATATATAGAAATAGCTTGTGATGGTTCGGGTTTTTACTAATATTTCTTAGGCAGTTCTCACGATTCAAAAATTACAGTATATTGCCTCACAGTTCTTATCCTTCTTCCTTTTTCCTGCGCATTTCTGATCGACATGGACTCTTAACCGTTTGGCAGAGTGAATATAACATCTGGTCCCAAGGAGGAGAGGCTGATGCTTTCTGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGCGGACAAATTCTTGGATGGAAATATGTAAGTTTTCTCCTCTTGCTATCTATGCAAAGTAGTCTAATTTCCATCATCTTTAATAGAACTGATGACTGTTCAGAAGTAGGAATCGTCACGACTTGGCTCAACAGTTAAAGGAGCAACTTATAATTTATACATTTAAGTTTGTCGTTCCGTTGACTGTTATCAACTATCTATCTCATGCATATTTCAACTTCCAAAATTAATTGGTGAACATAATTCACTGTAACTAGTTCAGGTGAGAAGAAGTTGGTCTGATGCCCTCCAGTATCAAATGTACTATACTAGAAATGATCTATAAAGAATGGACATGGGTTCGTTGATATGATTACATGCTATTCTATTTCAAATTAGGAAACTTCGATAAAATATATTGGAATATTATGAGTTCAATTTATCCTTAAGAAAAATGACCAATTAGAATAAATCGAAAACAAGAGGGAAAAAGAACTCTTGGAAGCACCCAACACGAGCATAGCTTAGTACTTAAAACATCTTCAAGAGGTCATGGGTTTGAATCTCCCAACTCTTATTGATGTAATAGCCACTTCTTTGCTATTACAATACATAATAAAATCCTATTTTGTCTGAAATTTTGGGAAAAGAAAAGGTGCTATGGTATGTGCTTGAATACTGGAGTTTGAAAATCTAAATTTTGGGAGAGGAAGGATGGGGTGAGGGGTTCTTTGCTCTCTAACTCTCTCTATCACGTCAAAGACTGGATTTCTCTCATAGACCAGAATTCATCACAGTTTCAGCTCTTTTTTTGTATTGCTTTCTTTCATTTCTATTCATTTTTCTTTGGTTTTGATTTTCGTTGTCTTGTCTTTCTGCTATGTTCTGGATTATTAATTTTTATAATCCTTTTATATGAAACCTGCTCAATGGAAAATGGGTAATGATAATGATAACAATAATATTGAGTTTTTGAAAATTTCAGCTATTGATTAAGGTGAAGTTTTTTCTCTCTATAATTTGTAGCCTAAGACAAGCTAAAAGGGGGTGCCTTCTTCACTTCTCTTTTACTTCCTCTGATTCTGAATATTGAAGGACTTAATAGACAAATTACTTAATTCATGCATAGTGTACATGTAATATTCCTTTCTAGCGAGGACATAGAAAACAATAATATGCATAATATAATCATCACAATTAGATGTAAATGCCGTACGGAAGGTAAGGTGCAACAATCATGTTTGCCCAGCAGCAATTGTACTGAGTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAATCATGGTTACCAAAAAGGATGTGTAAAAANTTCCAACATATGCATGTATACGTATGTGATAATACCTTTCATCTGCCTGAAATCCTGAAATAACATTAAATTAGAGTTGAAAATGGTGTAATTTATGGTTTGCATCTGAAAACATTTGTGGGTTTGTGTTTTTATGAAGGGATTTTCAGTTGAGTTGTTGGTTGAAGTATTAGTTTGCTAAATTGATATTGCTGCATTTCAATAGGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGGAAGTTTGTTCTTGAGAGGTACTCAGACATTTTCCTCATCTTTCCAAATAACATGAAGTTTACTGTAAATACATTATTGGTTCTTGAGTTTATTTATGCTTCTAACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCAAATTCTCTCAGAATAAGGAAACTCTAGCGTACATGTCAAAGTGTTGTATGTAGAAATAATTCTAGAGTCTGTAAACTACTATTAAACTGCATGACCATAATCTATAATATCATAAGCTTTTTATCGAATAGTGTCTTGAATGCTCGGTAAGAGCCTTTGTCTTATCTCTATTCGAATGAACGGAAGGGATGGCGCTAAGAAAATGGATGGTTCTGATCTTCGTAAAAGTGATTGCCCATGGATCCATTAAAGGTAATTTTGTTTCTAGTTTATTAAAAAG AAAAAAATTAAAAAAAAAAAAAAAAAAAAGAGTTTGGGGCCATTATTGAGTGGGCTGAAGCCCAAAACTAGAACTGGTAAGGGGAAGAAAGGAAGAACCGGTAATTACCGGTTCCCGTAGCTGGAAGGAAACGGCTACTGGCATCTCGCAAACCGACCAGGCATGACAAAGTTTCAAGTTCGTTATTTTGATTTTGTCTGGAGGAGAGGGGGATGAATATTTGCGTATGAGTCTGGTGAGAGCTTAGGTCTTCAATTTGGGATTCTTCTAGGGTTTTAATGGGTAGGGTTTTTCTTGTTGAATTGGAAGGCAGGTCTTACAGATGCCGCTTCTGTAATAACAATGTTGCTCTTGCCGATGACGTCCTTTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCATATCTTTTCAGCAATGTAGTGAATATAACATCTGGTCCCAAGGAGGAGAGGCTGATGCTTTCTGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCAAATTCTCTCAGAATAAGGAAACTCTAGCGTACATGTCAAAGTGTTGTATGTAGAAATAATTCTAGAGTCTGTAAACTACTATTAAACTGCATGACCATAATCTATAATATCATAAGCTTTTTATCGAATAGTGTCTTGAATGCTCGGTAAGAGCCTTTGTCTTATCTCTATTCGAATGAACGGAAGGGATGGCGCTAAGAAAATGGATGGTTCTGATCTTCGTAAAAGTGATTGCCCATGGATCCATTAAAGGTAATTTTGTTTCTAGTTTATTAAAAAG ATGGGTAGGGTTTTTCTTGTTGAATTGGAAGGCAGGTCTTACAGATGCCGCTTCTGTAATAACAATGTTGCTCTTGCCGATGACGTCCTTTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCATATCTTTTCAGCAATGTAGTGAATATAACATCTGGTCCCAAGGAGGAGAGGCTGATGCTTTCTGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGCGGACAAATTCTTGGATGGAAATATGTAACTACACATGACAAATACCAAAAGTACAAGGAGGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGATGCTCATCCTGGTTCAAGCGATATGGAAAATCCTTAG MGRVFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSDMENP Homology
BLAST of CmaCh13G006280 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 8.3e-45 Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35 Identity = 62/105 (59.05%), Postives = 86/105 (81.90%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2) HSP 1 Score: 147.5 bits (371), Expect = 1.0e-34 Identity = 58/106 (54.72%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.3e-33 Identity = 61/105 (58.10%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-31 Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.5e-68 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy TrEMBL
Match: A0A0A0LRZ0 (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_1G075050 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.9e-68 Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. ExPASy TrEMBL
Match: A0A1S3B6L5 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103486583 PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 2.5e-68 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 274.2 bits (700), Expect = 5.5e-70 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh13G006280 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia]) HSP 1 Score: 268.5 bits (685), Expect = 3.0e-68 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. NCBI nr
Match: XP_004146613.1 (protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypothetical protein Csa_013910 [Cucumis sativus]) HSP 1 Score: 268.1 bits (684), Expect = 3.9e-68 Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. NCBI nr
Match: XP_008442812.1 (PREDICTED: protein yippee-like At5g53940 [Cucumis melo]) HSP 1 Score: 267.7 bits (683), Expect = 5.1e-68 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of CmaCh13G006280 vs. NCBI nr
Match: XP_038893524.1 (protein yippee-like At5g53940 [Benincasa hispida]) HSP 1 Score: 264.6 bits (675), Expect = 4.3e-67 Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of CmaCh13G006280 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 181.0 bits (458), Expect = 5.9e-46 Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 0
BLAST of CmaCh13G006280 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 147.5 bits (371), Expect = 7.2e-36 Identity = 58/106 (54.72%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of CmaCh13G006280 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 147.5 bits (371), Expect = 7.2e-36 Identity = 58/106 (54.72%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of CmaCh13G006280 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 142.1 bits (357), Expect = 3.0e-34 Identity = 59/105 (56.19%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of CmaCh13G006280 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 142.1 bits (357), Expect = 3.0e-34 Identity = 61/105 (58.10%), Postives = 81/105 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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