CmaCh13G001170 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTCCCGAAGGAAAGCGTCCGCCCGCAGCGGCGCCGACCACCGCAGAACCCTGCATTCATTGCGGCGGAGCGTTGTAATTGTCGTACTGTATTGTAATTAATGTGGCTTTGATTTCACTCACTTCCTCGACGACTGTTCATCAAAAGGCGTGAACAGAATTGAGAACGTGTCTGTACCTTATAAGCCCACGATATCTGATTGCATCGCTCCAGACTTTTTAGTTCCAATAACTTTTTGAGCGTTCCAATTGATTTACCTTATTCAGGCGAATTTCTTCAGGCGGTTCGAGTTTGATTTTGTGAGTATCGGATTCTTTGTATTCGTTCATTATTTGGCACCATTTCCTGAATACTTTTCTGGATCTCGGCTGTTTTATTGGTTGTTTTGTTTTTATGTGTCTTTAGCGACAATCCACATTTTGTGTTTACCATTTTCTTGTTTGATTTCCAATTGGTCTGAGTTTGGTTGGATCTAAATCGCTTGATTGATGAAATAATATTTGTTTGTGATTCTTTTTGAGGATTTTCTGAAGTTTGAGATCTGTTTGATCTGTGATTTTGAGCATTGCAGATTAAGTATTTTGAGATTTGTCGGTTGTTGAAGTGTACCTGGAGGAAATGGAGAATGGTGATCAGTTCACGCAGTTTTCTGATGCTAAATATGAATGTCTTCTCTTTGGTATTACATTTGGGACTTTTAATGTTTTCCTTTTCAATTTCAAAGTTAAGAGTGAATAGTGTTTGATAGCAAAGAGTTATGTGTTTACTTTCAGATCTAGATGACACCCTTTATCCTTTAAATTCTGGCTTGTCAAAGGAAGTCTCCAAGAACATTCAAGGTTAGTTTGAATTTCCTTTCTCCTTTCCCCTCTGTATTAAGGAACATTTGGGGCTGATAGAGTTTAGGACAGTGTGGCTCTTCATATTTCTATGATGTTCTTCATTCTGATGTGAATTGGCATGGGACAATGGAGTTTAGGTTATTTTTCTTCTTGTTTTATGGAATTGGATGAATTTTGTTACTTTTTCTTGTAGAATTTATGATTGAAAAGTTAGGAATTGAGGAGAAAGTGCCTGAATTGTGCATTTCCTTGTACAAGATTTATGGGACAACACTGGCTGGTCTTAGAGTAAGTTAAAACATCATCATCGCCTTTTGCTTGATCGTTCTTCATAGTGATTGGATTCTGTGTCATTGTCGTTTTTTCGTGATTGCAGGCTATCGGTTATGACTTCGACTACGATGATTTCCATAGGTAGCAACCTTTTGATCTTCATTAGTGTGTATGTTTGAGAATTTTTAGTTATTTTCATAATGTGTTCTTCTGTTCTGCAGTTTTGCTCATGGAAGGTTGCCTTATGATAGGCTTAAGCCTGACCCTGTATTGAGGAACCTTCTTCATAGCTTACCGATTCGAAAACTTGTAAGTAGCTTTATCGACATTCGTTACATGATTTGATGTCTTCTCGTGTTTCACCAAGTGATTTGATTGTACGCTTTCTTTTCGGGTTTCTGTCTTACTTGTGAGCTCAGCTATTCACCAATGGTGATATGGCTCATGCAACTAGAGCGCTGCAGAGACTTGGGTTAGAAGACTGCTTTGAAGGGATTTTATGCTTTGAGACTTTGAATCCTAATAAGGAAACAGTTGTTGATGAGGCAGCAGGGTCTGTAGTTTTTGATATAGATCAGTTTATGAGCAGTCTAAACTCTGATATTGATCTGCCGAAGACACCAATCATCTGCAAACCATTTGAAGAGGCATATAAGCAAGTTTTCGAGATCGCCAATATTAACCCGCAAAAAACTGTAAGTGAAAGAACAGATTAGAATTAACTTTAAATGAGCTTTTCCAACCCTTTGTGTATGGGCCCAAGCCCACCATGCAAATAGTCCTTTTTCGGCTTTCCCTCTCCAACTGATATGGAAACTCACAGGGTCGAATCCAGATTCCTAATCTTGAACATAGGTCGTTACACTTTGGGAGAAAAAAGTCAACAAAAAGTTGCTATTATTATTTCTATGTAGTTCTTGAATGTTAAAAAGGTTACCTTGTCAAATTCCATATCGGTTGGAAAGAGGAAAGAAGCACCCCCTTTTGCTCCTCAAAGACATAGTATACTTTCTCCATTGACATGAGATCTTTTGGGGAAGCCCAAAACAAAGCCATGAAAGCTTATGTTCAAAGTGGACAATATCATACCATTGTGGAGAGTGATCTAACATTAGTTGGGTTCATATCATTGAATCTTGGGCCTTTATGAAAAATGTTTTGTTCCAACGCCTTTATCAATAATTTTTCTCCTTGACCCTTGTTACGAATGTTTCATTCTCCTCTCTAACCGATGTGGGATTGTAACGGCCCAAGCCAAAAATCATTCGTTTTAAGAACCTAATACACGAGCCAAGAACGAACTTGAGCCTTATAACTTTCAAAGCTTGCTACCTGACCATCAAGAACATTGCTTGATTGTTCAATAGTTGACCTGATCTGTTATTTTCTTTTCACAATACTACATTCTTCCTACTGTCTTGTCTGCAGTTGTTCTTCGACGATAGCGTTCGTAATCTACAAGCCGGGAAGTCGGTGGGCCTTCATACAGTACTGGTAAGTGCCAATACGCCATCTGTTGTTCTTCAAAGCTTGTTGAACTGTTAAACATTCTAACCTTATCATGAATTCAGATTGGTAGTTCACAACAAACAAATGGAGTGGATCACGCGTTTGAGAGCATCCATAATATCAGGGAAGGATTGCCCGAGCTTTGGGACGCCATCGGAAAGCTCGAAAACGTTTCGTACTCCGAAAAGGTAGCTATTGAGACTTCAGTTAGAGCTTAATTAGTGTTTATGATCTTAAGTTGTACGTACTATGATGATAATACTTGATAGTGCAAAACCGTTGGCAACTGCAATGAATGCTGGTTAATAGAACACATCTTTCCTTTTGGATTCCTGTTGATCA TGATTCCCGAAGGAAAGCGTCCGCCCGCAGCGGCGCCGACCACCGCAGAACCCTGCATTCATTGCGGCGGAGCGTTGTAATTGTCGTACTGTATTGTAATTAATGTGGCTTTGATTTCACTCACTTCCTCGACGACTGTTCATCAAAAGGCGTGAACAGAATTGAGAACGTGTCTGTACCTTATAAGCCCACGATATCTGATTGCATCGCTCCAGACTTTTTAGTTCCAATAACTTTTTGAGCGTTCCAATTGATTTACCTTATTCAGGCGAATTTCTTCAGGCGGTTCGAGTTTGATTTTATTAAGTATTTTGAGATTTGTCGGTTGTTGAAGTGTACCTGGAGGAAATGGAGAATGGTGATCAGTTCACGCAGTTTTCTGATGCTAAATATGAATGTCTTCTCTTTGATCTAGATGACACCCTTTATCCTTTAAATTCTGGCTTGTCAAAGGAAGTCTCCAAGAACATTCAAGAATTTATGATTGAAAAGTTAGGAATTGAGGAGAAAGTGCCTGAATTGTGCATTTCCTTGTACAAGATTTATGGGACAACACTGGCTGGTCTTAGAGCTATCGGTTATGACTTCGACTACGATGATTTCCATAGTTTTGCTCATGGAAGGTTGCCTTATGATAGGCTTAAGCCTGACCCTGTATTGAGGAACCTTCTTCATAGCTTACCGATTCGAAAACTTCTATTCACCAATGGTGATATGGCTCATGCAACTAGAGCGCTGCAGAGACTTGGGTTAGAAGACTGCTTTGAAGGGATTTTATGCTTTGAGACTTTGAATCCTAATAAGGAAACAGTTGTTGATGAGGCAGCAGGGTCTGTAGTTTTTGATATAGATCAGTTTATGAGCAGTCTAAACTCTGATATTGATCTGCCGAAGACACCAATCATCTGCAAACCATTTGAAGAGGCATATAAGCAAGTTTTCGAGATCGCCAATATTAACCCGCAAAAAACTTTGTTCTTCGACGATAGCGTTCGTAATCTACAAGCCGGGAAGTCGGTGGGCCTTCATACAGTACTGATTGGTAGTTCACAACAAACAAATGGAGTGGATCACGCGTTTGAGAGCATCCATAATATCAGGGAAGGATTGCCCGAGCTTTGGGACGCCATCGGAAAGCTCGAAAACGTTTCGTACTCCGAAAAGGTAGCTATTGAGACTTCAGTTAGAGCTTAATTAGTGTTTATGATCTTAAGTTGTACGTACTATGATGATAATACTTGATAGTGCAAAACCGTTGGCAACTGCAATGAATGCTGGTTAATAGAACACATCTTTCCTTTTGGATTCCTGTTGATCA ATGGAGAATGGTGATCAGTTCACGCAGTTTTCTGATGCTAAATATGAATGTCTTCTCTTTGATCTAGATGACACCCTTTATCCTTTAAATTCTGGCTTGTCAAAGGAAGTCTCCAAGAACATTCAAGAATTTATGATTGAAAAGTTAGGAATTGAGGAGAAAGTGCCTGAATTGTGCATTTCCTTGTACAAGATTTATGGGACAACACTGGCTGGTCTTAGAGCTATCGGTTATGACTTCGACTACGATGATTTCCATAGTTTTGCTCATGGAAGGTTGCCTTATGATAGGCTTAAGCCTGACCCTGTATTGAGGAACCTTCTTCATAGCTTACCGATTCGAAAACTTCTATTCACCAATGGTGATATGGCTCATGCAACTAGAGCGCTGCAGAGACTTGGGTTAGAAGACTGCTTTGAAGGGATTTTATGCTTTGAGACTTTGAATCCTAATAAGGAAACAGTTGTTGATGAGGCAGCAGGGTCTGTAGTTTTTGATATAGATCAGTTTATGAGCAGTCTAAACTCTGATATTGATCTGCCGAAGACACCAATCATCTGCAAACCATTTGAAGAGGCATATAAGCAAGTTTTCGAGATCGCCAATATTAACCCGCAAAAAACTTTGTTCTTCGACGATAGCGTTCGTAATCTACAAGCCGGGAAGTCGGTGGGCCTTCATACAGTACTGATTGGTAGTTCACAACAAACAAATGGAGTGGATCACGCGTTTGAGAGCATCCATAATATCAGGGAAGGATTGCCCGAGCTTTGGGACGCCATCGGAAAGCTCGAAAACGTTTCGTACTCCGAAAAGGTAGCTATTGAGACTTCAGTTAGAGCTTAA MENGDQFTQFSDAKYECLLFDLDDTLYPLNSGLSKEVSKNIQEFMIEKLGIEEKVPELCISLYKIYGTTLAGLRAIGYDFDYDDFHSFAHGRLPYDRLKPDPVLRNLLHSLPIRKLLFTNGDMAHATRALQRLGLEDCFEGILCFETLNPNKETVVDEAAGSVVFDIDQFMSSLNSDIDLPKTPIICKPFEEAYKQVFEIANINPQKTLFFDDSVRNLQAGKSVGLHTVLIGSSQQTNGVDHAFESIHNIREGLPELWDAIGKLENVSYSEKVAIETSVRA Homology
BLAST of CmaCh13G001170 vs. ExPASy Swiss-Prot
Match: Q09893 (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.4e-15 Identity = 71/252 (28.17%), Postives = 108/252 (42.86%), Query Frame = 0
BLAST of CmaCh13G001170 vs. ExPASy TrEMBL
Match: A0A6J1I0X0 (uncharacterized protein LOC111469497 OS=Cucurbita maxima OX=3661 GN=LOC111469497 PE=4 SV=1) HSP 1 Score: 573.2 bits (1476), Expect = 6.1e-160 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of CmaCh13G001170 vs. ExPASy TrEMBL
Match: A0A6J1HLM8 (uncharacterized protein LOC111464700 OS=Cucurbita moschata OX=3662 GN=LOC111464700 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 5.4e-156 Identity = 274/281 (97.51%), Postives = 277/281 (98.58%), Query Frame = 0
BLAST of CmaCh13G001170 vs. ExPASy TrEMBL
Match: A0A1S4E1J3 (uncharacterized protein C24B11.05-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497146 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 9.5e-137 Identity = 232/281 (82.56%), Postives = 263/281 (93.59%), Query Frame = 0
BLAST of CmaCh13G001170 vs. ExPASy TrEMBL
Match: A0A5D3BED8 (Haloacid dehalogenase-like hydrolase superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002080 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 230/279 (82.44%), Postives = 261/279 (93.55%), Query Frame = 0
BLAST of CmaCh13G001170 vs. ExPASy TrEMBL
Match: A0A5A7VPY6 (Haloacid dehalogenase-like hydrolase superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00750 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.8e-135 Identity = 230/279 (82.44%), Postives = 261/279 (93.55%), Query Frame = 0
BLAST of CmaCh13G001170 vs. NCBI nr
Match: XP_022970556.1 (uncharacterized protein LOC111469497 [Cucurbita maxima] >XP_022970557.1 uncharacterized protein LOC111469497 [Cucurbita maxima]) HSP 1 Score: 573.2 bits (1476), Expect = 1.3e-159 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
BLAST of CmaCh13G001170 vs. NCBI nr
Match: KAG6583417.1 (hypothetical protein SDJN03_19349, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 561.2 bits (1445), Expect = 5.0e-156 Identity = 275/281 (97.86%), Postives = 277/281 (98.58%), Query Frame = 0
BLAST of CmaCh13G001170 vs. NCBI nr
Match: XP_022964693.1 (uncharacterized protein LOC111464700 [Cucurbita moschata] >XP_022964696.1 uncharacterized protein LOC111464700 [Cucurbita moschata]) HSP 1 Score: 560.1 bits (1442), Expect = 1.1e-155 Identity = 274/281 (97.51%), Postives = 277/281 (98.58%), Query Frame = 0
BLAST of CmaCh13G001170 vs. NCBI nr
Match: XP_023521917.1 (uncharacterized protein LOC111785758 [Cucurbita pepo subsp. pepo] >XP_023521918.1 uncharacterized protein LOC111785758 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 558.5 bits (1438), Expect = 3.2e-155 Identity = 274/281 (97.51%), Postives = 276/281 (98.22%), Query Frame = 0
BLAST of CmaCh13G001170 vs. NCBI nr
Match: KAG7019180.1 (SPAC24B11.05 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 521.5 bits (1342), Expect = 4.4e-144 Identity = 258/272 (94.85%), Postives = 262/272 (96.32%), Query Frame = 0
BLAST of CmaCh13G001170 vs. TAIR 10
Match: AT5G59480.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 369.8 bits (948), Expect = 2.0e-102 Identity = 177/277 (63.90%), Postives = 222/277 (80.14%), Query Frame = 0
BLAST of CmaCh13G001170 vs. TAIR 10
Match: AT5G59480.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 364.8 bits (935), Expect = 6.4e-101 Identity = 177/277 (63.90%), Postives = 221/277 (79.78%), Query Frame = 0
BLAST of CmaCh13G001170 vs. TAIR 10
Match: AT5G02230.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 340.1 bits (871), Expect = 1.7e-93 Identity = 163/282 (57.80%), Postives = 213/282 (75.53%), Query Frame = 0
BLAST of CmaCh13G001170 vs. TAIR 10
Match: AT5G02230.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 340.1 bits (871), Expect = 1.7e-93 Identity = 163/282 (57.80%), Postives = 213/282 (75.53%), Query Frame = 0
BLAST of CmaCh13G001170 vs. TAIR 10
Match: AT5G59490.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 313.5 bits (802), Expect = 1.7e-85 Identity = 155/281 (55.16%), Postives = 203/281 (72.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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