Homology
BLAST of CmaCh06G000210 vs. ExPASy Swiss-Prot
Match:
F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 7.5e-31
Identity = 102/301 (33.89%), Postives = 150/301 (49.83%), Query Frame = 0
Query: 434 NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPW 493
+G+ S T P RL++AV+SIS +AL +A+ +I SV +M DRI E
Sbjct: 1037 SGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDL 1096
Query: 494 FCEKETHLS-----LQDGGGFSKNMKRKMNATTL-----------NDMPSPCSDIVGSEP 553
+ L Q+G +K MKR A L N S+ E
Sbjct: 1097 VAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLES 1156
Query: 554 TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLR 613
T TS KK + +++ALLEE++ IN+ I+TV+E+ DE+ + GT +R
Sbjct: 1157 TATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDEDAADPSEVAISSIGCEGTTVR 1216
Query: 614 CSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRD 673
S+ + H ++T P+ ++LLVP YP P L KL + E+ D
Sbjct: 1217 FSFIAVSLSPALKAHL-SSTQMSPIQPLRLLVPCSYPNGSPSLLDKLPVETSKEN---ED 1276
Query: 674 MWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA 699
+ SKA + + LR+ +SL++ AK WD CARAV+C+YAQ+ GGG FSS+YG+WE
Sbjct: 1277 LSSKAMARFNILLRSLSQPMSLKDIAKTWDACARAVICEYAQQFGGGTFSSKYGTWEKYV 1333
BLAST of CmaCh06G000210 vs. ExPASy Swiss-Prot
Match:
Q9SHV7 (Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis thaliana OX=3702 GN=MED15C PE=3 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 6.6e-19
Identity = 109/465 (23.44%), Postives = 205/465 (44.09%), Query Frame = 0
Query: 271 PREIGSLRSEADWIQKYTPRNRQHSEKIEQEFKSSWIKQNQKSTENIQAIRR------SG 330
PR + + S +QK + R H +++Q+ Q+Q T + +R
Sbjct: 487 PRAVNTNISSVQSLQK---QKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVNIKA 546
Query: 331 MYLENHFNS--KFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNV 390
LE +S + P+ SQI + P++ + P + + G ++S+
Sbjct: 547 RLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHIL----PATINKTGT-PLNSSG 606
Query: 391 SSLWSPISQFSRGYSSLKLLNSKSEIEVP---SHEIRSYNTMTCRLA--ETTRFGNNGQL 450
S+ +P G S + + +E P EI S + +L ET
Sbjct: 607 SAFVAPAPSPVPGDSEMPI-----SVESPVSGVDEINSTLDSSSKLGTQETPLLFVPPPE 666
Query: 451 STTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEK 510
T +P +RL+KA ++ S ++L ++ EISSV +M D I + E+
Sbjct: 667 PITERPIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSER 726
Query: 511 ETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDN 570
+ + + SK MKR +N ++ D S + + TS K+ ++
Sbjct: 727 TRNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPG 786
Query: 571 -ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNS 630
ALL+E++ N +ETV+E+ ++++ GT++ C+Y + +
Sbjct: 787 YALLQEIKETNGRLVETVVEICDEDSL-------GTIVTCTYAPVALSATFKDHYKSGKI 846
Query: 631 VFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAF 690
+F+ ++ + ++LL P+DYP P+ L +++ D T ++ D+ ++ S S
Sbjct: 847 IFYVSKCLMQAQIQPLRLLFPMDYPYSSPIVLEEISFD--TSVHKYEDLSARTRSRFSLS 906
Query: 691 LRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE 695
++ + A+ W++CARA + +YA+R GGG FSS+YG+WE
Sbjct: 907 MKEFSEPGFSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWE 929
BLAST of CmaCh06G000210 vs. ExPASy TrEMBL
Match:
A0A6J1I7U8 (mediator of RNA polymerase II transcription subunit 15a isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469984 PE=4 SV=1)
HSP 1 Score: 1391.3 bits (3600), Expect = 0.0e+00
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP
Sbjct: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT
Sbjct: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK
Sbjct: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT
Sbjct: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 699
BLAST of CmaCh06G000210 vs. ExPASy TrEMBL
Match:
A0A6J1EZU5 (mediator of RNA polymerase II transcription subunit 15a isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111440856 PE=4 SV=1)
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 643/699 (91.99%), Postives = 655/699 (93.71%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANS+EQHIPQSLSQPHERLHGQKLKVRQTHQQY+MHNQSCV+PQN LTAP
Sbjct: 1 MEHEKKLFKNANSKEQHIPQSLSQPHERLHGQKLKVRQTHQQYLMHNQSCVRPQNTLTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQ+YSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQYYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQ+VGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLL KAYVRASEQCLQVGQT
Sbjct: 121 IEQHKQHQTVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLTKAYVRASEQCLQVGQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKM+KYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHE GSINIASK+
Sbjct: 181 EKMQKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHENGSINIASKR 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSH NP QQT+S DSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHINPAQQTNSFDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKF PQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFSPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPT PSTDGLGKISSNVSSLWSPISQFS+
Sbjct: 361 LYGRASPTFPSTDGLGKISSNVSSLWSPISQFSQ-------------------------- 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 ------ETTRFGNNGQLS-TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGSSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRAATEGKNSVFHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNT+CGTED EFRDMWSKATSLL+AFLRT+PVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTECGTEDEEFRDMWSKATSLLNAFLRTAPVYLSLE 660
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 666
BLAST of CmaCh06G000210 vs. ExPASy TrEMBL
Match:
A0A6J1D158 (probable mediator of RNA polymerase II transcription subunit 15c isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016654 PE=4 SV=1)
HSP 1 Score: 766.5 bits (1978), Expect = 9.4e-218
Identity = 430/715 (60.14%), Postives = 524/715 (73.29%), Query Frame = 0
Query: 16 QHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAPCRPQGFQSRAFGNHM 75
Q+I Q Q HE+L Q L RQ HQQ+ MH+QSCV+PQN L +PCRP G QSR G ++
Sbjct: 148 QNIMQLTPQSHEQLQRQNLNARQLHQQFGMHSQSCVRPQNTLISPCRPLGLQSRDSGVYI 207
Query: 76 PPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHY------SAIEQHKQHQS 135
PP+MF H +V+NLQPNENL AQ+KEEVI ED S F+ H+ + IEQHKQHQS
Sbjct: 208 PPQMFPPHSEVMNLQPNENLRAQIKEEVIGEDVQASKFVQPHHTPRGPNTMIEQHKQHQS 267
Query: 136 VGASAVPNGNPNAEDWHDLALSEVQRLR-THLPLLKKAYVRASEQCLQVGQTEKMEKYEH 195
+G SAV NP EDWHD A +E+Q L+ T LPLLK++Y RA++ CL+VGQTE+++K ++
Sbjct: 268 MGVSAVLIENPKGEDWHDQAYNEMQGLKMTCLPLLKESYERAAKLCLEVGQTEQIQKCKN 327
Query: 196 DKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKKQPLHGQPS 255
+++QK+ NFL+LP D+I +TKE FY+ +++IE+ K HE + + +K+QPLHGQP
Sbjct: 328 HMSLMQKMTNFLELPRDKITYFTKEKFYQSMKSIEKFAKAHENRNTFLVNKQQPLHGQPG 387
Query: 256 LCQSHTNPTQQTD---------------SSDSSSPRAPREIGSLRSEADWIQKYTPRNRQ 315
+ QSH NP Q++D SSDSSSPR P EIGS R EA+ IQK + RQ
Sbjct: 388 ISQSHINPVQRSDNANPHFQPLNLAATGSSDSSSPRTPSEIGSSRPEANRIQKNLLQKRQ 447
Query: 316 HSEKIEQEFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTH-EASRLSQIAERA 375
E I+QEF+SSWI+Q QKSTE+IQAI RSG+ L+NH NSK PQ+H EAS+LS+IAERA
Sbjct: 448 QPEIIKQEFQSSWIQQMQKSTESIQAINRSGVSLQNHLNSKHSPQSHEEASQLSKIAERA 507
Query: 376 LPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEI 435
L K C+S+Y GRASPT S ST GLGK SSNVS L S Q+ +S+ LLNSK++I
Sbjct: 508 LSKDPCSSVYGRDGRASPTPSSSTVGLGKSSSNVSCLSSLNFQYPETRNSVNLLNSKTKI 567
Query: 436 EVPSHEIRSYNTMTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISS 495
+V SHEIRS T + AE T G++ LST TQP NRLLKAV+S+S++ALR AI ISS
Sbjct: 568 QVKSHEIRSSGISTSQFAEPTSLGSSQHLSTATQPLNRLLKAVDSMSDQALRTAISGISS 627
Query: 496 VTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSE 555
V NM D +TEP C +K HLSLQDG G S NMKRK+ A TLNDMPSPCSD GSE
Sbjct: 628 VGNMCDTVTEPSVFGTRCHQKAAHLSLQDGFGSSNNMKRKICAITLNDMPSPCSDNDGSE 687
Query: 556 PTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGA 615
TVTS SKKLKKL+DNALLEEMRNIN+ +ETVLELD+ +NVNRR ANAGTV+RC+Y
Sbjct: 688 LTVTSRSKKLKKLTDNALLEEMRNINQRLVETVLELDSAQNVNRRFANAGTVVRCTYSAV 747
Query: 616 TEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKAT 675
++ N +FH NTLKLPVLSVKLLVPLDYPEDYPVFLSK NTDCG ED E RD+ KAT
Sbjct: 748 SDRNNLMFHFA-NTLKLPVLSVKLLVPLDYPEDYPVFLSKFNTDCGNEDEECRDLSRKAT 807
Query: 676 SLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA 699
S+L AFLRT+P LSL E A+AWD+CAR VV +YAQR GGGCFSSRYG+WEDC A
Sbjct: 808 SMLRAFLRTAPERLSLGEYARAWDQCARYVVSEYAQRTGGGCFSSRYGTWEDCVA 861
BLAST of CmaCh06G000210 vs. ExPASy TrEMBL
Match:
A0A6J1D3G7 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016654 PE=4 SV=1)
HSP 1 Score: 766.5 bits (1978), Expect = 9.4e-218
Identity = 430/715 (60.14%), Postives = 524/715 (73.29%), Query Frame = 0
Query: 16 QHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAPCRPQGFQSRAFGNHM 75
Q+I Q Q HE+L Q L RQ HQQ+ MH+QSCV+PQN L +PCRP G QSR G ++
Sbjct: 93 QNIMQLTPQSHEQLQRQNLNARQLHQQFGMHSQSCVRPQNTLISPCRPLGLQSRDSGVYI 152
Query: 76 PPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHY------SAIEQHKQHQS 135
PP+MF H +V+NLQPNENL AQ+KEEVI ED S F+ H+ + IEQHKQHQS
Sbjct: 153 PPQMFPPHSEVMNLQPNENLRAQIKEEVIGEDVQASKFVQPHHTPRGPNTMIEQHKQHQS 212
Query: 136 VGASAVPNGNPNAEDWHDLALSEVQRLR-THLPLLKKAYVRASEQCLQVGQTEKMEKYEH 195
+G SAV NP EDWHD A +E+Q L+ T LPLLK++Y RA++ CL+VGQTE+++K ++
Sbjct: 213 MGVSAVLIENPKGEDWHDQAYNEMQGLKMTCLPLLKESYERAAKLCLEVGQTEQIQKCKN 272
Query: 196 DKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKKQPLHGQPS 255
+++QK+ NFL+LP D+I +TKE FY+ +++IE+ K HE + + +K+QPLHGQP
Sbjct: 273 HMSLMQKMTNFLELPRDKITYFTKEKFYQSMKSIEKFAKAHENRNTFLVNKQQPLHGQPG 332
Query: 256 LCQSHTNPTQQTD---------------SSDSSSPRAPREIGSLRSEADWIQKYTPRNRQ 315
+ QSH NP Q++D SSDSSSPR P EIGS R EA+ IQK + RQ
Sbjct: 333 ISQSHINPVQRSDNANPHFQPLNLAATGSSDSSSPRTPSEIGSSRPEANRIQKNLLQKRQ 392
Query: 316 HSEKIEQEFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTH-EASRLSQIAERA 375
E I+QEF+SSWI+Q QKSTE+IQAI RSG+ L+NH NSK PQ+H EAS+LS+IAERA
Sbjct: 393 QPEIIKQEFQSSWIQQMQKSTESIQAINRSGVSLQNHLNSKHSPQSHEEASQLSKIAERA 452
Query: 376 LPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEI 435
L K C+S+Y GRASPT S ST GLGK SSNVS L S Q+ +S+ LLNSK++I
Sbjct: 453 LSKDPCSSVYGRDGRASPTPSSSTVGLGKSSSNVSCLSSLNFQYPETRNSVNLLNSKTKI 512
Query: 436 EVPSHEIRSYNTMTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISS 495
+V SHEIRS T + AE T G++ LST TQP NRLLKAV+S+S++ALR AI ISS
Sbjct: 513 QVKSHEIRSSGISTSQFAEPTSLGSSQHLSTATQPLNRLLKAVDSMSDQALRTAISGISS 572
Query: 496 VTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSE 555
V NM D +TEP C +K HLSLQDG G S NMKRK+ A TLNDMPSPCSD GSE
Sbjct: 573 VGNMCDTVTEPSVFGTRCHQKAAHLSLQDGFGSSNNMKRKICAITLNDMPSPCSDNDGSE 632
Query: 556 PTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGA 615
TVTS SKKLKKL+DNALLEEMRNIN+ +ETVLELD+ +NVNRR ANAGTV+RC+Y
Sbjct: 633 LTVTSRSKKLKKLTDNALLEEMRNINQRLVETVLELDSAQNVNRRFANAGTVVRCTYSAV 692
Query: 616 TEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKAT 675
++ N +FH NTLKLPVLSVKLLVPLDYPEDYPVFLSK NTDCG ED E RD+ KAT
Sbjct: 693 SDRNNLMFHFA-NTLKLPVLSVKLLVPLDYPEDYPVFLSKFNTDCGNEDEECRDLSRKAT 752
Query: 676 SLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA 699
S+L AFLRT+P LSL E A+AWD+CAR VV +YAQR GGGCFSSRYG+WEDC A
Sbjct: 753 SMLRAFLRTAPERLSLGEYARAWDQCARYVVSEYAQRTGGGCFSSRYGTWEDCVA 806
BLAST of CmaCh06G000210 vs. ExPASy TrEMBL
Match:
A0A6J1I7W8 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima OX=3661 GN=LOC111469996 PE=4 SV=1)
HSP 1 Score: 670.6 bits (1729), Expect = 7.0e-189
Identity = 343/375 (91.47%), Postives = 343/375 (91.47%), Query Frame = 0
Query: 325 MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSS 384
MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSS
Sbjct: 1 MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSS 60
Query: 385 LWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCRLAETTRFGNNGQLSTTTQPH 444
LWSPISQFSR ETTRFGNNGQLSTTTQPH
Sbjct: 61 LWSPISQFSR--------------------------------ETTRFGNNGQLSTTTQPH 120
Query: 445 NRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKM 504
NRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKM
Sbjct: 121 NRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKM 180
Query: 505 NATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDEN 564
NATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDEN
Sbjct: 181 NATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDEN 240
Query: 565 VNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL 624
VNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Sbjct: 241 VNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL 300
Query: 625 NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGG 684
NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGG
Sbjct: 301 NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGG 343
Query: 685 CFSSRYGSWEDCAAT 700
CFSSRYGSWEDCAAT
Sbjct: 361 CFSSRYGSWEDCAAT 343
BLAST of CmaCh06G000210 vs. NCBI nr
Match:
XP_022971183.1 (mediator of RNA polymerase II transcription subunit 15a isoform X1 [Cucurbita maxima] >XP_022971184.1 mediator of RNA polymerase II transcription subunit 15a isoform X1 [Cucurbita maxima])
HSP 1 Score: 1391.3 bits (3600), Expect = 0.0e+00
Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP
Sbjct: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT
Sbjct: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK
Sbjct: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT
Sbjct: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 699
BLAST of CmaCh06G000210 vs. NCBI nr
Match:
XP_022933464.1 (mediator of RNA polymerase II transcription subunit 15a isoform X3 [Cucurbita moschata])
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 643/699 (91.99%), Postives = 655/699 (93.71%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANS+EQHIPQSLSQPHERLHGQKLKVRQTHQQY+MHNQSCV+PQN LTAP
Sbjct: 1 MEHEKKLFKNANSKEQHIPQSLSQPHERLHGQKLKVRQTHQQYLMHNQSCVRPQNTLTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQ+YSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQYYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQ+VGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLL KAYVRASEQCLQVGQT
Sbjct: 121 IEQHKQHQTVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLTKAYVRASEQCLQVGQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKM+KYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHE GSINIASK+
Sbjct: 181 EKMQKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHENGSINIASKR 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSH NP QQT+S DSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHINPAQQTNSFDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKF PQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFSPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPT PSTDGLGKISSNVSSLWSPISQFS+
Sbjct: 361 LYGRASPTFPSTDGLGKISSNVSSLWSPISQFSQ-------------------------- 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 ------ETTRFGNNGQLS-TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGSSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRAATEGKNSVFHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNT+CGTED EFRDMWSKATSLL+AFLRT+PVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTECGTEDEEFRDMWSKATSLLNAFLRTAPVYLSLE 660
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 666
BLAST of CmaCh06G000210 vs. NCBI nr
Match:
KAG6596167.1 (Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1256.1 bits (3249), Expect = 0.0e+00
Identity = 640/699 (91.56%), Postives = 652/699 (93.28%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANS+EQHIPQSLSQPHERLHGQKLKVRQTH+QYVMHNQSCV+PQN LTAP
Sbjct: 1 MEHEKKLFKNANSKEQHIPQSLSQPHERLHGQKLKVRQTHRQYVMHNQSCVRPQNTLTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEV+DEDFIGSTFLHQHYSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVVDEDFIGSTFLHQHYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLL KAYVRASEQCLQV QT
Sbjct: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLTKAYVRASEQCLQVAQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKM+KYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLK HE GSINIASK+
Sbjct: 181 EKMQKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKGHENGSINIASKQ 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSH NP QQT+SS+SSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHINPAQQTNSSNSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKF PQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFSPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPT PSTDGLGKISSNVSSLWSPISQFS+
Sbjct: 361 LYGRASPTFPSTDGLGKISSNVSSLWSPISQFSQ-------------------------- 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 ------ETTRFGNNGQLS-TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGG SKNMKRKMNATTLN MPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGSSKNMKRKMNATTLNGMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRAATEGKNSVFHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNT+CGTED EFRDMWSKATSLL+A LRT+PVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTECGTEDEEFRDMWSKATSLLNALLRTAPVYLSLE 660
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 666
BLAST of CmaCh06G000210 vs. NCBI nr
Match:
KAG7027708.1 (Mediator of RNA polymerase II transcription subunit 15a [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 613/699 (87.70%), Postives = 624/699 (89.27%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANS+EQHIPQSLSQPHERLHGQKLK
Sbjct: 1 MEHEKKLFKNANSKEQHIPQSLSQPHERLHGQKLK------------------------- 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
GFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEV+DEDFIGSTFLHQHYSA
Sbjct: 61 ----GFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVVDEDFIGSTFLHQHYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLL KAYVRASEQCLQV +T
Sbjct: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLTKAYVRASEQCLQVAET 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKM+KYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLK HE GSINIASK+
Sbjct: 181 EKMQKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKGHENGSINIASKQ 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
QPLHGQPSLCQSH NP QQT+SS+SSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QPLHGQPSLCQSHINPAQQTNSSNSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKF PQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFSPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPT PSTDGLGKISSNVSSLWSPISQFS+
Sbjct: 361 LYGRASPTFPSTDGLGKISSNVSSLWSPISQFSQ-------------------------- 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 ------ETTRFGNNGQLS-TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGSSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSV HSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRAATEGKNSVIHSENNTLKL 600
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLE 660
PVLSVKLLVPLDYPEDYPVFLSKLNT+CGTED EFRDMWSKATSLL+A LRT+PVYLSLE
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTECGTEDEEFRDMWSKATSLLNALLRTAPVYLSLE 637
Query: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 700
ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Sbjct: 661 ECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT 637
BLAST of CmaCh06G000210 vs. NCBI nr
Match:
XP_023539395.1 (uncharacterized protein LOC111800051 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1137.5 bits (2941), Expect = 0.0e+00
Identity = 583/631 (92.39%), Postives = 589/631 (93.34%), Query Frame = 0
Query: 1 MEHEKKLFKNANSEEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVKPQNILTAP 60
MEHEKKLFKNANS+EQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCV+PQN LTAP
Sbjct: 1 MEHEKKLFKNANSKEQHIPQSLSQPHERLHGQKLKVRQTHQQYVMHNQSCVRPQNTLTAP 60
Query: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA
Sbjct: 61 CRPQGFQSRAFGNHMPPEMFTQHPKVVNLQPNENLSAQVKEEVIDEDFIGSTFLHQHYSA 120
Query: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT
Sbjct: 121 IEQHKQHQSVGASAVPNGNPNAEDWHDLALSEVQRLRTHLPLLKKAYVRASEQCLQVGQT 180
Query: 181 EKMEKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHEKGSINIASKK 240
EKM+KYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHE GSINIASK+
Sbjct: 181 EKMQKYEHDKNILQKIINFLKLPEDRIISYTKESFYRCVQTIEETLKVHENGSINIASKQ 240
Query: 241 QPLHGQPSLCQSHTNPTQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Q LHGQPSLCQSH NP QQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ
Sbjct: 241 QALHGQPSLCQSHINPAQQTDSSDSSSPRAPREIGSLRSEADWIQKYTPRNRQHSEKIEQ 300
Query: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFFPQTHEASRLSQIAERALPKIACNS 360
EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKF PQTHEASRLSQIAERALPKIACNS
Sbjct: 301 EFKSSWIKQNQKSTENIQAIRRSGMYLENHFNSKFSPQTHEASRLSQIAERALPKIACNS 360
Query: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNT 420
LYGRASPTSPSTDGLGKISSNVSSLWSPISQFS+
Sbjct: 361 LYGRASPTSPSTDGLGKISSNVSSLWSPISQFSQ-------------------------- 420
Query: 421 MTCRLAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
ETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW
Sbjct: 421 ------ETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW 480
Query: 481 FCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
FCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA
Sbjct: 481 FCEKETHLSLQDGGGSSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDNA 540
Query: 541 LLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL 600
LLEEMRNINRHFIETVLELDTDE VNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKL
Sbjct: 541 LLEEMRNINRHFIETVLELDTDEIVNRRLANAGTVLRCSYRAATEGKNSVFHSENNTLKL 599
Query: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTE 632
PVLSVKLLVPLDYPEDYPVFLSKLNTDCG +
Sbjct: 601 PVLSVKLLVPLDYPEDYPVFLSKLNTDCGNQ 599
BLAST of CmaCh06G000210 vs. TAIR 10
Match:
AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )
HSP 1 Score: 137.1 bits (344), Expect = 5.4e-32
Identity = 102/301 (33.89%), Postives = 150/301 (49.83%), Query Frame = 0
Query: 434 NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPW 493
+G+ S T P RL++AV+SIS +AL +A+ +I SV +M DRI E
Sbjct: 1037 SGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIAGSAPGNGSRASVGEDL 1096
Query: 494 FCEKETHLS-----LQDGGGFSKNMKRKMNATTL-----------NDMPSPCSDIVGSEP 553
+ L Q+G +K MKR A L N S+ E
Sbjct: 1097 VAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVGDNYKQFAGSETSDLES 1156
Query: 554 TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLR 613
T TS KK + +++ALLEE++ IN+ I+TV+E+ DE+ + GT +R
Sbjct: 1157 TATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDEDAADPSEVAISSIGCEGTTVR 1216
Query: 614 CSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRD 673
S+ + H ++T P+ ++LLVP YP P L KL + E+ D
Sbjct: 1217 FSFIAVSLSPALKAHL-SSTQMSPIQPLRLLVPCSYPNGSPSLLDKLPVETSKEN---ED 1276
Query: 674 MWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA 699
+ SKA + + LR+ +SL++ AK WD CARAV+C+YAQ+ GGG FSS+YG+WE
Sbjct: 1277 LSSKAMARFNILLRSLSQPMSLKDIAKTWDACARAVICEYAQQFGGGTFSSKYGTWEKYV 1333
BLAST of CmaCh06G000210 vs. TAIR 10
Match:
AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )
HSP 1 Score: 98.2 bits (243), Expect = 2.8e-20
Identity = 111/457 (24.29%), Postives = 205/457 (44.86%), Query Frame = 0
Query: 271 PREIGSLRSEADWIQKYTPRNRQHSEKIEQEFKSSWIKQNQKSTENIQAIRR------SG 330
PR + + S +QK + R H +++Q+ Q+Q T + +R
Sbjct: 407 PRAVNTNISSVQSLQK---QKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVNIKA 466
Query: 331 MYLENHFNS--KFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNV 390
LE +S + P+ SQI + P++ + P + + G ++S+
Sbjct: 467 RLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHIL----PATINKTGT-PLNSSG 526
Query: 391 SSLWSPISQFSRGYSSLKLLNSKSEIEVP---SHEIRSYNTMTCRLA--ETTRFGNNGQL 450
S+ +P G S + + +E P EI S + +L ET
Sbjct: 527 SAFVAPAPSPVPGDSEMPI-----SVESPVSGVDEINSTLDSSSKLGTQETPLLFVPPPE 586
Query: 451 STTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEK 510
T +P +RL+KA ++ S ++L ++ EISSV +M D I + E+
Sbjct: 587 PITERPIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSER 646
Query: 511 ETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDN 570
+ + + SK MKR +N ++ D S + + TS K+ ++
Sbjct: 647 TRNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPG 706
Query: 571 -ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTL 630
ALL+E++ N +ETV+E+ ++++ GT++ C+Y A ++ F +
Sbjct: 707 YALLQEIKETNGRLVETVVEICDEDSL-------GTIVTCTY--APVALSATFKDHYKSG 766
Query: 631 KL-PVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYL 690
K+ + ++LL P+DYP P+ L +++ D T ++ D+ ++ S S ++
Sbjct: 767 KIAQIQPLRLLFPMDYPYSSPIVLEEISFD--TSVHKYEDLSARTRSRFSLSMKEFSEPG 826
Query: 691 SLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE 695
+ A+ W++CARA + +YA+R GGG FSS+YG+WE
Sbjct: 827 FSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWE 839
BLAST of CmaCh06G000210 vs. TAIR 10
Match:
AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )
HSP 1 Score: 97.4 bits (241), Expect = 4.7e-20
Identity = 109/465 (23.44%), Postives = 205/465 (44.09%), Query Frame = 0
Query: 271 PREIGSLRSEADWIQKYTPRNRQHSEKIEQEFKSSWIKQNQKSTENIQAIRR------SG 330
PR + + S +QK + R H +++Q+ Q+Q T + +R
Sbjct: 487 PRAVNTNISSVQSLQK---QKRFHHRQMQQQQPQQGNHQHQMQTNEMNDVRMRERVNIKA 546
Query: 331 MYLENHFNS--KFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNV 390
LE +S + P+ SQI + P++ + P + + G ++S+
Sbjct: 547 RLLEQQVSSSQRQVPKQESNVSSSQIQNHSSPQLVDQHIL----PATINKTGT-PLNSSG 606
Query: 391 SSLWSPISQFSRGYSSLKLLNSKSEIEVP---SHEIRSYNTMTCRLA--ETTRFGNNGQL 450
S+ +P G S + + +E P EI S + +L ET
Sbjct: 607 SAFVAPAPSPVPGDSEMPI-----SVESPVSGVDEINSTLDSSSKLGTQETPLLFVPPPE 666
Query: 451 STTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEK 510
T +P +RL+KA ++ S ++L ++ EISSV +M D I + E+
Sbjct: 667 PITERPIDRLIKAFQAASPKSLAESVSEISSVISMVDMIGGSFPSSGGSRAGLGEDLSER 726
Query: 511 ETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVGSEPTVTSISKKLKKLSDN 570
+ + + SK MKR +N ++ D S + + TS K+ ++
Sbjct: 727 TRNFTTHEETNLSKRMKRSINIVPPDMSSQIDSYEQLSSLESEVVSTTSSGLKVNNIAPG 786
Query: 571 -ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNS 630
ALL+E++ N +ETV+E+ ++++ GT++ C+Y + +
Sbjct: 787 YALLQEIKETNGRLVETVVEICDEDSL-------GTIVTCTYAPVALSATFKDHYKSGKI 846
Query: 631 VFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAF 690
+F+ ++ + ++LL P+DYP P+ L +++ D T ++ D+ ++ S S
Sbjct: 847 IFYVSKCLMQAQIQPLRLLFPMDYPYSSPIVLEEISFD--TSVHKYEDLSARTRSRFSLS 906
Query: 691 LRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE 695
++ + A+ W++CARA + +YA+R GGG FSS+YG+WE
Sbjct: 907 MKEFSEPGFSKGIAQTWNDCARATMVEYAERHGGGTFSSKYGAWE 929
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4I171 | 7.5e-31 | 33.89 | Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana ... | [more] |
Q9SHV7 | 6.6e-19 | 23.44 | Probable mediator of RNA polymerase II transcription subunit 15c OS=Arabidopsis ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I7U8 | 0.0e+00 | 100.00 | mediator of RNA polymerase II transcription subunit 15a isoform X1 OS=Cucurbita ... | [more] |
A0A6J1EZU5 | 0.0e+00 | 91.99 | mediator of RNA polymerase II transcription subunit 15a isoform X3 OS=Cucurbita ... | [more] |
A0A6J1D158 | 9.4e-218 | 60.14 | probable mediator of RNA polymerase II transcription subunit 15c isoform X1 OS=M... | [more] |
A0A6J1D3G7 | 9.4e-218 | 60.14 | mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Momor... | [more] |
A0A6J1I7W8 | 7.0e-189 | 91.47 | mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita maxima... | [more] |
Match Name | E-value | Identity | Description | |
XP_022971183.1 | 0.0e+00 | 100.00 | mediator of RNA polymerase II transcription subunit 15a isoform X1 [Cucurbita ma... | [more] |
XP_022933464.1 | 0.0e+00 | 91.99 | mediator of RNA polymerase II transcription subunit 15a isoform X3 [Cucurbita mo... | [more] |
KAG6596167.1 | 0.0e+00 | 91.56 | Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argy... | [more] |
KAG7027708.1 | 0.0e+00 | 87.70 | Mediator of RNA polymerase II transcription subunit 15a [Cucurbita argyrosperma ... | [more] |
XP_023539395.1 | 0.0e+00 | 92.39 | uncharacterized protein LOC111800051 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
AT1G15780.1 | 5.4e-32 | 33.89 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT2G10440.2 | 2.8e-20 | 24.29 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT2G10440.1 | 4.7e-20 | 23.44 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |