CmaCh00G002920 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAAAGCAGAAAAATCTCATCACCGACAAGACGAGAGATGATTGGCAAGGAAGAGCAAAACCGTAGAGCACTGTGATTGGGTTAAAATGGCGGATTGATTACCAATTGTTGCAGTCACCCTTACAATCGTGTAAAGCGTAAAAGCACTCTCTCCAATTCACGCGCACAATTATAGCCACAATTATAAACAACCCTTCTCCTTCTACTTCTCTCTCGATTGCCCTTTTCGTTTCTCCCCCCATGCTGTTTACCTCATCATCTTCTTCTTGGGGGGACACAGATTGTGTTTGGAAGTAGAATTTCTGCGTTTTTGTCTCTAAATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACACAGCTTTTCTTTTGGTTGGATTTATAATTGTTGAGATTTTCATTATTATTTTTATATGAATTTAGTTGCCAGCAAGAATCTGTTTGTTGGGCTTGTTTGAATTTTATTTTCAATTTGAGATTCCATGTGCTGAATTGGAATTTGAGAAGGTTCTGTACAACCCTAATTGTGAGACCCACTAAGTTCAAATTTTCCCTAGGTAGTTGATGCTTGTACTTTTATCTGTTAAAAGAATTAGCTACATTGCTTTGCCAACAATTCTTTCCCATATGCATTCAATTCTTAGTTGACAGTTCTAGTCTGTTCTACGAAGTAGTTTATATTCCTGTCTAGCCTGATGCTGGTTAAATCTAAAGAGACACTTAATTTATGGTTGATTAAACCATAAGGAGCCATGTTTTCTCTTCATATCTCTTTAAAGTTCCTTCAGATCTGGCTATAGCTTTTGGGAAGATTTTTGGTTATGAACGAGGGGACTGAACACCTTGTTACTTGGAGAGTTCTTTATTTTCATATTGAGTTATGAGGCTTTTGGGACTGGTAAAATTTGAAATAGAAGCATGGCCATGATTACCAAATGACAGTGGGGTACGAGAAGAGAAGTAGTCGAACGCCAGCACCCTTTAGGCACAGAATTCTCGCCAGTAAATATGATGCAAGTCCTATGTGATTGTTCATAGGAAACATATCTCTTAACAGTTGTTGCCTTTGGATTTTCACTGCTAGCTGTGAAATTTATCTGAGATTGGAAGCTTTCTTAATGGCTGAGAACCATTGTATAATTGGATTTTGAAAGGATGCTTGGTTGGATAGGAAACTTCAATTTTCATAATGCTTTTCCTTAACTTTATGCTCAGCTGACTTGTTTTAGATGTTTCTAAAAAGCCTGAGCAGAGAACCTGTGGAGAAAGTCCTTACATTTCAAAATTCTTTTAACGAGAGAGATTACTAGTAGGCTTACATCTTGACAACATGGAAGGTTTTCATATAACTCATAGTTTTGATTCAAAATACTGGAAGTAGGAGAGTTCTAGCATCCTTACATGCAAATCTCTTCTTGATTACCTTATTGACTATTGCATGCCTGCAAGCTCCCATAGGCAATGAGCAGCTCTCAAATTTATTATTCAGTTTGTAGCGTTGAGACTACATATGTGTAAATTTCTTGTGTGGAAAACATGACAACTTCTTGTAATTTCTCCTTCGCTTTCTGAGGGCAGGAGGCTGTACTATTTTCCCCGCTTTTCCTTTTATACATGATTATCTGTTTAAAAATGTTTCTTACTCAAACAAAATAGATGTCAATCATTTTCCCCGTGGCGCCTGTAAACTGTTCTATGATGCCACAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACTTTCTTCATCAATGCTTTAGATTTCTTCAGATTGTGATGTTGGTCTGTTTTAAGTGTATCATGATATAAGGCTTGATTCCATCAATGGAGCATTTTCTGAAACTCGATTAGGACCAGCTTATTGAACAAGTAGGCATTAAATGACTGCTGCATTTGTTAGCTAGCTATCAAGATGAAAATCTTTAAAGTACACTTTGCAGTATTTTTAGATGCCTTGCAGGTTTCTACCTATCTATGTTACTGAGGTTGGAACTGTAGACAATTGCTCAATCCTTTAATAAATTGGTAATCAAAAACTCTGCGCCAAATATATATATTTTTTATATGAAATAATTTCATTGATGTATGGAATTTACTAAAAGGATGGTTTGTCCACTGTGATTACAAAAAGCTTTGCCAATTGGTTAAAAGGGAAGCATTAATGTATGAAGCATAACTCTGCTCAGTATCTGATATCTCAAGTTGCTAATCTCAAAATACTCTGCGTTCCTTTATTGGTTTTCTGCTGCATAGCTGTTCTGTCATTATTTATCGCTTTGGTTATAATAAGAAAGCTCCAGAGCAGTTCTTATTTGCACGGAAATTCTTGCGAATGCTTCCCACATTAAATGATTGATATTCATTGGATTTAACATTTGTTGTTTCCTAAAAAGGAAAGGCATTTTACAGCAAAATCTGACCTTGCAATTATTGTTCTTATTAGAAATTTTAGTCGCCTGTTTTATGTTTTGACGTTTGTATATATGTTGAAATGGAACTGTCAGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGGTTAGCATCCTCCTCCCTCCCCATCCCCCATCTCATATGTAAACAATTCATACTATTTTATTGGTTTAGCTTATAACAAGCACCAGGCATGTTAAAATATAAATAGATTTTTGTGAGATCCCACATTGGTTGGAGAGAGAACTAAACATTCCTTATAAAGGTGTGAAAACCTCTCCCTAGTAACTCGTTTTAAAACTTTGAGGGGAAGCCCATAAGGAGAAGCTCAAAGAAGACAATATTTGCTAGTAGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAGACACCGGACGGTGTGCCAGCGAGGACACTGGGACCCCGAAGGGGTGGATTGTGAGATCCCACATAGGTTAGAGAGGGAAACGAAACATTTATTAAAAGGGTGTGGAAACCTCTCTCTAGTAGACGTATTTTAAAACCTTGAGAGCCCAAAAGGAAAATCCAAAGAGTACAATATATGCTAGCGGTGGGCTTGAAATGTTACAATTTTCGAGTCATCGATGTGAATGTGCTGGAAGGATTGATGTGGATCTAATATGAACTGAAAACTTCCCTTATCCCAAATTTGGAGAACTATACCAAGTGTTTGATCCCATGGCAGGCATTGATTATCAATATATGAAGGAATACCATCATTCTACTTACTCTATCTAACCTTTCTCCTTCCCCCAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAAACAGAAGCTTCTTCATCATAGACTTGCTCCCAAATGCCCATCGGTACCATTGTGCATTCCCCTACTATTAATATAACCTAGCAGTCAGCTTTCCACTCTGTAAATTTGCATTCTTGTGAAATAGTTTGCTGCCTTCTTCTGCTACCTTTGATGTTTTTACTTTGAAACTGGTGATCTTGGATCTAGTTTTAAATACATGCCATTGATTCATTTGGTTTGATGGACAGAGGCTTGCATATTCTTAAAATTTAGTCCAGAATCTGTCAGATCTCTACTGTACTTTTAAGTAACTGCTAGGTTCAAATCTCTACTCTACCTTTGTGATTCACTAAGACTTGAAATGGAGGGCTCTGATTAAGAAGCTAAACTGTGAACAACTTGCTATGTGCAGGTATCATTCATAATGAAACTTTCTTTTACGTCTGCATGGTCTTGCATGTCAAAGAAGCAGTAGTTTCGCCGTTCGTGTCGTCGGTCAATGGCTAAATCTTGATGGCTCTGTTGATTTTATCTCTAAATTGTTCAGTGTTTTAGTTAAATTTCGTTACTTTATTTCTCAACTTTTAATTGTGATTTTATCCTCTAATCCTTGGTAATAATATAAATTTATTTATTTAGAAAGTTTATAATCTATATAACCCACAAG GTCAAAGCAGAAAAATCTCATCACCGACAAGACGAGAGATGATTGGCAAGGAAGAGCAAAACCGTAGAGCACTGTGATTGGGTTAAAATGGCGGATTGATTACCAATTGTTGCAGTCACCCTTACAATCGTGTAAAGCGTAAAAGCACTCTCTCCAATTCACGCGCACAATTATAGCCACAATTATAAACAACCCTTCTCCTTCTACTTCTCTCTCGATTGCCCTTTTCGTTTCTCCCCCCATGCTGTTTACCTCATCATCTTCTTCTTGGGGGGACACAGATTGTGTTTGGAAGTAGAATTTCTGCGTTTTTGTCTCTAAATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAAACAGAAGCTTCTTCATCATAGACTTGCTCCCAAATGCCCATCGAGGCTTGCATATTCTTAAAATTTAGTCCAGAATCTGTCAGATCTCTACTGTACTTTTAAGTAACTGCTAGGTATCATTCATAATGAAACTTTCTTTTACGTCTGCATGGTCTTGCATGTCAAAGAAGCAGTAGTTTCGCCGTTCGTGTCGTCGGTCAATGGCTAAATCTTGATGGCTCTGTTGATTTTATCTCTAAATTGTTCAGTGTTTTAGTTAAATTTCGTTACTTTATTTCTCAACTTTTAATTGTGATTTTATCCTCTAATCCTTGGTAATAATATAAATTTATTTATTTAGAAAGTTTATAATCTATATAACCCACAAG ATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAA MADVFRFSSHSLCFPSTSFPASFASSCNSIQTCLPPIQSSDKRSTSLPRYSASFVMPLSFTPRKRLVSFKVPAAVAEKDQPKWWEKSAPNMIDIHSTQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTARCSIGPPRGVGDLVLEPSLSPKDKQ Homology
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.2e-68 Identity = 125/163 (76.69%), Postives = 140/163 (85.89%), Query Frame = 0
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2) HSP 1 Score: 230.3 bits (586), Expect = 2.1e-59 Identity = 123/203 (60.59%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2) HSP 1 Score: 229.9 bits (585), Expect = 2.7e-59 Identity = 122/205 (59.51%), Postives = 144/205 (70.24%), Query Frame = 0
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38 Identity = 82/184 (44.57%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35 Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G29670.1 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 264.6 bits (675), Expect = 7.1e-71 Identity = 138/222 (62.16%), Postives = 171/222 (77.03%), Query Frame = 0
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2 ) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60 Identity = 123/203 (60.59%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 ) HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60 Identity = 122/205 (59.51%), Postives = 144/205 (70.24%), Query Frame = 0
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 ) HSP 1 Score: 149.4 bits (376), Expect = 3.3e-36 Identity = 62/142 (43.66%), Postives = 100/142 (70.42%), Query Frame = 0
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 ) HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35 Identity = 62/129 (48.06%), Postives = 93/129 (72.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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