CmaCh00G002920 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh00G002920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionthioredoxin-like 2, chloroplastic
LocationCma_Chr00: 22616345 .. 22620782 (-)
RNA-Seq ExpressionCmaCh00G002920
SyntenyCmaCh00G002920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAAAGCAGAAAAATCTCATCACCGACAAGACGAGAGATGATTGGCAAGGAAGAGCAAAACCGTAGAGCACTGTGATTGGGTTAAAATGGCGGATTGATTACCAATTGTTGCAGTCACCCTTACAATCGTGTAAAGCGTAAAAGCACTCTCTCCAATTCACGCGCACAATTATAGCCACAATTATAAACAACCCTTCTCCTTCTACTTCTCTCTCGATTGCCCTTTTCGTTTCTCCCCCCATGCTGTTTACCTCATCATCTTCTTCTTGGGGGGACACAGATTGTGTTTGGAAGTAGAATTTCTGCGTTTTTGTCTCTAAATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACACAGCTTTTCTTTTGGTTGGATTTATAATTGTTGAGATTTTCATTATTATTTTTATATGAATTTAGTTGCCAGCAAGAATCTGTTTGTTGGGCTTGTTTGAATTTTATTTTCAATTTGAGATTCCATGTGCTGAATTGGAATTTGAGAAGGTTCTGTACAACCCTAATTGTGAGACCCACTAAGTTCAAATTTTCCCTAGGTAGTTGATGCTTGTACTTTTATCTGTTAAAAGAATTAGCTACATTGCTTTGCCAACAATTCTTTCCCATATGCATTCAATTCTTAGTTGACAGTTCTAGTCTGTTCTACGAAGTAGTTTATATTCCTGTCTAGCCTGATGCTGGTTAAATCTAAAGAGACACTTAATTTATGGTTGATTAAACCATAAGGAGCCATGTTTTCTCTTCATATCTCTTTAAAGTTCCTTCAGATCTGGCTATAGCTTTTGGGAAGATTTTTGGTTATGAACGAGGGGACTGAACACCTTGTTACTTGGAGAGTTCTTTATTTTCATATTGAGTTATGAGGCTTTTGGGACTGGTAAAATTTGAAATAGAAGCATGGCCATGATTACCAAATGACAGTGGGGTACGAGAAGAGAAGTAGTCGAACGCCAGCACCCTTTAGGCACAGAATTCTCGCCAGTAAATATGATGCAAGTCCTATGTGATTGTTCATAGGAAACATATCTCTTAACAGTTGTTGCCTTTGGATTTTCACTGCTAGCTGTGAAATTTATCTGAGATTGGAAGCTTTCTTAATGGCTGAGAACCATTGTATAATTGGATTTTGAAAGGATGCTTGGTTGGATAGGAAACTTCAATTTTCATAATGCTTTTCCTTAACTTTATGCTCAGCTGACTTGTTTTAGATGTTTCTAAAAAGCCTGAGCAGAGAACCTGTGGAGAAAGTCCTTACATTTCAAAATTCTTTTAACGAGAGAGATTACTAGTAGGCTTACATCTTGACAACATGGAAGGTTTTCATATAACTCATAGTTTTGATTCAAAATACTGGAAGTAGGAGAGTTCTAGCATCCTTACATGCAAATCTCTTCTTGATTACCTTATTGACTATTGCATGCCTGCAAGCTCCCATAGGCAATGAGCAGCTCTCAAATTTATTATTCAGTTTGTAGCGTTGAGACTACATATGTGTAAATTTCTTGTGTGGAAAACATGACAACTTCTTGTAATTTCTCCTTCGCTTTCTGAGGGCAGGAGGCTGTACTATTTTCCCCGCTTTTCCTTTTATACATGATTATCTGTTTAAAAATGTTTCTTACTCAAACAAAATAGATGTCAATCATTTTCCCCGTGGCGCCTGTAAACTGTTCTATGATGCCACAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACTTTCTTCATCAATGCTTTAGATTTCTTCAGATTGTGATGTTGGTCTGTTTTAAGTGTATCATGATATAAGGCTTGATTCCATCAATGGAGCATTTTCTGAAACTCGATTAGGACCAGCTTATTGAACAAGTAGGCATTAAATGACTGCTGCATTTGTTAGCTAGCTATCAAGATGAAAATCTTTAAAGTACACTTTGCAGTATTTTTAGATGCCTTGCAGGTTTCTACCTATCTATGTTACTGAGGTTGGAACTGTAGACAATTGCTCAATCCTTTAATAAATTGGTAATCAAAAACTCTGCGCCAAATATATATATTTTTTATATGAAATAATTTCATTGATGTATGGAATTTACTAAAAGGATGGTTTGTCCACTGTGATTACAAAAAGCTTTGCCAATTGGTTAAAAGGGAAGCATTAATGTATGAAGCATAACTCTGCTCAGTATCTGATATCTCAAGTTGCTAATCTCAAAATACTCTGCGTTCCTTTATTGGTTTTCTGCTGCATAGCTGTTCTGTCATTATTTATCGCTTTGGTTATAATAAGAAAGCTCCAGAGCAGTTCTTATTTGCACGGAAATTCTTGCGAATGCTTCCCACATTAAATGATTGATATTCATTGGATTTAACATTTGTTGTTTCCTAAAAAGGAAAGGCATTTTACAGCAAAATCTGACCTTGCAATTATTGTTCTTATTAGAAATTTTAGTCGCCTGTTTTATGTTTTGACGTTTGTATATATGTTGAAATGGAACTGTCAGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGGTTAGCATCCTCCTCCCTCCCCATCCCCCATCTCATATGTAAACAATTCATACTATTTTATTGGTTTAGCTTATAACAAGCACCAGGCATGTTAAAATATAAATAGATTTTTGTGAGATCCCACATTGGTTGGAGAGAGAACTAAACATTCCTTATAAAGGTGTGAAAACCTCTCCCTAGTAACTCGTTTTAAAACTTTGAGGGGAAGCCCATAAGGAGAAGCTCAAAGAAGACAATATTTGCTAGTAGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAGACACCGGACGGTGTGCCAGCGAGGACACTGGGACCCCGAAGGGGTGGATTGTGAGATCCCACATAGGTTAGAGAGGGAAACGAAACATTTATTAAAAGGGTGTGGAAACCTCTCTCTAGTAGACGTATTTTAAAACCTTGAGAGCCCAAAAGGAAAATCCAAAGAGTACAATATATGCTAGCGGTGGGCTTGAAATGTTACAATTTTCGAGTCATCGATGTGAATGTGCTGGAAGGATTGATGTGGATCTAATATGAACTGAAAACTTCCCTTATCCCAAATTTGGAGAACTATACCAAGTGTTTGATCCCATGGCAGGCATTGATTATCAATATATGAAGGAATACCATCATTCTACTTACTCTATCTAACCTTTCTCCTTCCCCCAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAAACAGAAGCTTCTTCATCATAGACTTGCTCCCAAATGCCCATCGGTACCATTGTGCATTCCCCTACTATTAATATAACCTAGCAGTCAGCTTTCCACTCTGTAAATTTGCATTCTTGTGAAATAGTTTGCTGCCTTCTTCTGCTACCTTTGATGTTTTTACTTTGAAACTGGTGATCTTGGATCTAGTTTTAAATACATGCCATTGATTCATTTGGTTTGATGGACAGAGGCTTGCATATTCTTAAAATTTAGTCCAGAATCTGTCAGATCTCTACTGTACTTTTAAGTAACTGCTAGGTTCAAATCTCTACTCTACCTTTGTGATTCACTAAGACTTGAAATGGAGGGCTCTGATTAAGAAGCTAAACTGTGAACAACTTGCTATGTGCAGGTATCATTCATAATGAAACTTTCTTTTACGTCTGCATGGTCTTGCATGTCAAAGAAGCAGTAGTTTCGCCGTTCGTGTCGTCGGTCAATGGCTAAATCTTGATGGCTCTGTTGATTTTATCTCTAAATTGTTCAGTGTTTTAGTTAAATTTCGTTACTTTATTTCTCAACTTTTAATTGTGATTTTATCCTCTAATCCTTGGTAATAATATAAATTTATTTATTTAGAAAGTTTATAATCTATATAACCCACAAG

mRNA sequence

GTCAAAGCAGAAAAATCTCATCACCGACAAGACGAGAGATGATTGGCAAGGAAGAGCAAAACCGTAGAGCACTGTGATTGGGTTAAAATGGCGGATTGATTACCAATTGTTGCAGTCACCCTTACAATCGTGTAAAGCGTAAAAGCACTCTCTCCAATTCACGCGCACAATTATAGCCACAATTATAAACAACCCTTCTCCTTCTACTTCTCTCTCGATTGCCCTTTTCGTTTCTCCCCCCATGCTGTTTACCTCATCATCTTCTTCTTGGGGGGACACAGATTGTGTTTGGAAGTAGAATTTCTGCGTTTTTGTCTCTAAATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAAACAGAAGCTTCTTCATCATAGACTTGCTCCCAAATGCCCATCGAGGCTTGCATATTCTTAAAATTTAGTCCAGAATCTGTCAGATCTCTACTGTACTTTTAAGTAACTGCTAGGTATCATTCATAATGAAACTTTCTTTTACGTCTGCATGGTCTTGCATGTCAAAGAAGCAGTAGTTTCGCCGTTCGTGTCGTCGGTCAATGGCTAAATCTTGATGGCTCTGTTGATTTTATCTCTAAATTGTTCAGTGTTTTAGTTAAATTTCGTTACTTTATTTCTCAACTTTTAATTGTGATTTTATCCTCTAATCCTTGGTAATAATATAAATTTATTTATTTAGAAAGTTTATAATCTATATAACCCACAAG

Coding sequence (CDS)

ATGGCTGATGTTTTTAGATTTTCCTCGCATTCTTTATGTTTCCCATCCACTTCTTTCCCTGCCTCCTTTGCTTCATCCTGCAATTCTATTCAGACTTGCCTTCCACCCATTCAAAGCTCGGATAAGAGGTCGACTTCTCTGCCGCGTTACTCTGCTAGCTTTGTAATGCCTCTTTCTTTCACACCCAGAAAGAGGTTGGTGTCTTTCAAGGTACCGGCAGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAGTGCACCAAACATGATTGATATACATTCGACACAGGAATTTTTAACTGCATTGAGTGAATCTGGTGATAGATTAGTTATTGTAGATTTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTATGCAGAACAGCTGATGAGCACCCTGAGATTTTATTCCTGAAAGTCAACTTTGATGAAAACAAGCAAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCATTTTTATCGTGGAGCTGATGGACAATTGGAGTCCTTCTCATGCTCACTCGCAAAGTTCCAGAAAATTAAAGATGCAATTAAAATGCACAACACAGCTCGTTGCAGCATTGGGCCACCAAGAGGAGTAGGAGATCTTGTACTGGAGCCCTCCTTGAGTCCCAAGGACAAACAATAA

Protein sequence

MADVFRFSSHSLCFPSTSFPASFASSCNSIQTCLPPIQSSDKRSTSLPRYSASFVMPLSFTPRKRLVSFKVPAAVAEKDQPKWWEKSAPNMIDIHSTQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTARCSIGPPRGVGDLVLEPSLSPKDKQ
Homology
[Close]
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.2e-68
Identity = 125/163 (76.69%), Postives = 140/163 (85.89%), Query Frame = 0 

Query: 62  PRKRLVSFKVPAAVAEK-DQPKWWEKSA-PNMIDIHSTQEFLTALSESGDRLVIVDFYGT 121
           PR R    K  AAV++K +QPKWWEK+A PNMIDIHSTQEFL AL ++GDRLVIV+FYGT
Sbjct: 52  PRHR--RLKAHAAVSDKSEQPKWWEKNAGPNMIDIHSTQEFLDALRDAGDRLVIVEFYGT 111

Query: 122 WCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESF 181
           WC SCRALFPRLCRTA E+P+ILFLKVNFDENK MCK LNVKVLPYFHFYRGADGQLE+F
Sbjct: 112 WCGSCRALFPRLCRTAVENPDILFLKVNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAF 171

Query: 182 SCSLAKFQKIKDAIKMHNTARCSIGPPRGVGDLVLEPSLSPKD 223
           SCSLAKFQK+KDAI +HNTARCSIGPP GVGD++  P   P +
Sbjct: 172 SCSLAKFQKLKDAIAVHNTARCSIGPPVGVGDVLDSPEEKPAE 212

[Close]
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-59
Identity = 123/203 (60.59%), Postives = 153/203 (75.37%), Query Frame = 0 

Query: 1   MADVFRFSSHSL--CFPSTSFPASFASSCNSIQTCLPPIQ--SSDKR---STSLPRYSAS 60
           MA V R ++ S+     S+SF +SFA++ N +Q CLPP    +SDKR    +S P  S+S
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSF-SSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSS 60

Query: 61  FVMPLS--------FTPRKRLVSFKVPAAVAEKDQPKWWEKSAPNMIDIHSTQEFLTALS 120
              P S          P+ ++V  KV   VAE + PKWWE++APNM+DIHST+EFL+ALS
Sbjct: 61  HYHPSSGLGSHLPLRRPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 ESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPY 180
            +G+RLVIV+FYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENK MCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQK 189
           FHFYRGADGQLESFSCSLAK +K
Sbjct: 181 FHFYRGADGQLESFSCSLAKVKK 202

[Close]
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 2.7e-59
Identity = 122/205 (59.51%), Postives = 144/205 (70.24%), Query Frame = 0 

Query: 6   RFSSHSLCFPSTSFPAS-------FASSCNSIQTCLPPIQSSDKRSTSLPRYSASFVMPL 65
           R  S SL   S S P S         SSCN          SS   S+SL   ++S +  L
Sbjct: 9   RSLSFSLYASSNSTPISTPIEARQLLSSCNRFYGL-----SSSSSSSSLT--TSSLIGNL 68

Query: 66  SFTPRKRLVSFKVPAAVAEKDQPKWWE-KSAPNMIDIHSTQEFLTALSESGDRLVIVDFY 125
            F+ R + +S KV A  AE +QPKWWE K+ PNMIDI S ++FL AL ++GDRLVIVDFY
Sbjct: 69  VFSSRNQSLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFY 128

Query: 126 GTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLE 185
           GTWC SCRA+FP+LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+E
Sbjct: 129 GTWCGSCRAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVE 188

Query: 186 SFSCSLAKFQKIKDAIKMHNTARCS 203
           SFSCSLAKFQK+++AI+ HN    S
Sbjct: 189 SFSCSLAKFQKLREAIERHNVGSIS 206

[Close]
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 82/184 (44.57%), Postives = 116/184 (63.04%), Query Frame = 0 

Query: 42  KRSTSLPRYSASFVMPLSFTPRKRLVSFKVPAAVAEKDQPKWWEKS-APNMIDIHSTQEF 101
           +RS  L R  A  V P    P  R +   V   +A     KWWEK   PNM ++ S Q+ 
Sbjct: 48  RRSPFLGRRLA--VGPRRSRPVPRNLVAPVQMNLAFAKATKWWEKGLQPNMREVESAQDL 107

Query: 102 LTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNV 161
           + +L+ +GD LVIVDF+   C  CRAL P++C+ A+++P++LFL+VN++E+K MC SL+V
Sbjct: 108 VDSLTNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVLFLQVNYEEHKSMCYSLHV 167

Query: 162 KVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTARCSIGPPRGVGDLVLEPSLSP 221
            VLP+F FYRGA G+L SFSC+ A  +K +DA+  H   RCS+GP RG+ +  L    + 
Sbjct: 168 HVLPFFRFYRGAQGRLCSFSCTNATIKKFRDALAKHKPDRCSLGPTRGLEESELLALAAN 227

Query: 222 KDKQ 225
           KD Q
Sbjct: 228 KDLQ 229

[Close]
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35
Identity = 63/129 (48.84%), Postives = 93/129 (72.09%), Query Frame = 0 

Query: 82  KWWEKS-APNMIDIHSTQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPE 141
           +WWEK   PNM +I S Q+   +L  +GD+LV+VDF+   C  CRAL P++ + A+++PE
Sbjct: 85  RWWEKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPE 144

Query: 142 ILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTAR 201
           +LFL+VN++++K MC SL+V VLP+F FYRGA G++ SFSC+ A  +K KDA+  H   R
Sbjct: 145 VLFLQVNYEKHKSMCYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKFKDALAKHGPDR 204

Query: 202 CSIGPPRGV 210
           C +GP +G+
Sbjct: 205 CGLGPAKGL 213

[Close]
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G29670.1 (atypical CYS HIS rich thioredoxin 2 )

HSP 1 Score: 264.6 bits (675), Expect = 7.1e-71
Identity = 138/222 (62.16%), Postives = 171/222 (77.03%), Query Frame = 0 

Query: 1   MADVFRFSSHSL--CFPSTSFPASFASSCNSIQTCLPPIQ--SSDKR---STSLPRYSAS 60
           MA V R ++ S+     S+SF +SFA++ N +Q CLPP    +SDKR    +S P  S+S
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSF-SSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSS 60

Query: 61  FVMPLS--------FTPRKRLVSFKVPAAVAEKDQPKWWEKSAPNMIDIHSTQEFLTALS 120
              P S          P+ ++V  KV   VAE + PKWWE++APNM+DIHST+EFL+ALS
Sbjct: 61  HYHPSSGLGSHLPLRRPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 ESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPY 180
            +G+RLVIV+FYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENK MCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTARCSIGPPR 208
           FHFYRGADGQLESFSCSLAKFQKIKDAI++HNT RCS+GP +
Sbjct: 181 FHFYRGADGQLESFSCSLAKFQKIKDAIQLHNTDRCSLGPAK 221

[Close]
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G29670.2 (atypical CYS HIS rich thioredoxin 2 )

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60
Identity = 123/203 (60.59%), Postives = 153/203 (75.37%), Query Frame = 0 

Query: 1   MADVFRFSSHSL--CFPSTSFPASFASSCNSIQTCLPPIQ--SSDKR---STSLPRYSAS 60
           MA V R ++ S+     S+SF +SFA++ N +Q CLPP    +SDKR    +S P  S+S
Sbjct: 1   MAGVVRLTTTSVQAIRVSSSF-SSFATALNPLQPCLPPNSNLNSDKRLRLLSSSPSCSSS 60

Query: 61  FVMPLS--------FTPRKRLVSFKVPAAVAEKDQPKWWEKSAPNMIDIHSTQEFLTALS 120
              P S          P+ ++V  KV   VAE + PKWWE++APNM+DIHST+EFL+ALS
Sbjct: 61  HYHPSSGLGSHLPLRRPKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALS 120

Query: 121 ESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPY 180
            +G+RLVIV+FYGTWCASCRALFP+LC+TA EHP+I+FLKVNFDENK MCKSLNV+VLP+
Sbjct: 121 GAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPF 180

Query: 181 FHFYRGADGQLESFSCSLAKFQK 189
           FHFYRGADGQLESFSCSLAK +K
Sbjct: 181 FHFYRGADGQLESFSCSLAKVKK 202

[Close]
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 )

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60
Identity = 122/205 (59.51%), Postives = 144/205 (70.24%), Query Frame = 0 

Query: 6   RFSSHSLCFPSTSFPAS-------FASSCNSIQTCLPPIQSSDKRSTSLPRYSASFVMPL 65
           R  S SL   S S P S         SSCN          SS   S+SL   ++S +  L
Sbjct: 9   RSLSFSLYASSNSTPISTPIEARQLLSSCNRFYGL-----SSSSSSSSLT--TSSLIGNL 68

Query: 66  SFTPRKRLVSFKVPAAVAEKDQPKWWE-KSAPNMIDIHSTQEFLTALSESGDRLVIVDFY 125
            F+ R + +S KV A  AE +QPKWWE K+ PNMIDI S ++FL AL ++GDRLVIVDFY
Sbjct: 69  VFSSRNQSLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFY 128

Query: 126 GTWCASCRALFPRLCRTADEHPEILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLE 185
           GTWC SCRA+FP+LC+TA EHP ILFLKVNFDENK +CKSLNVKVLPYFHFYRGADGQ+E
Sbjct: 129 GTWCGSCRAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVE 188

Query: 186 SFSCSLAKFQKIKDAIKMHNTARCS 203
           SFSCSLAKFQK+++AI+ HN    S
Sbjct: 189 SFSCSLAKFQKLREAIERHNVGSIS 206

[Close]
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 )

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-36
Identity = 62/142 (43.66%), Postives = 100/142 (70.42%), Query Frame = 0 

Query: 82  KWWEKS-APNMIDIHSTQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPE 141
           KWWEK   PNM  + S Q+ + +L  +GD+LV+VDF+   C  C+AL P++C+ A+++PE
Sbjct: 85  KWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNPE 144

Query: 142 ILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTAR 201
           + FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFSC+ A  +K K+A++ H   +
Sbjct: 145 VEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGREQ 204

Query: 202 CSIGPPRGVGDLVLEPSLSPKD 223
           CSIG  +G+ +  L    + KD
Sbjct: 205 CSIGETKGLEEKELVAMAANKD 226

[Close]
BLAST of CmaCh00G002920 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-35
Identity = 62/129 (48.06%), Postives = 93/129 (72.09%), Query Frame = 0 

Query: 82  KWWEKS-APNMIDIHSTQEFLTALSESGDRLVIVDFYGTWCASCRALFPRLCRTADEHPE 141
           KWWEK    NM +I S QE + +L+ +GD+LV+VDF+   C  C+AL P++C+ A+ +P+
Sbjct: 89  KWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPD 148

Query: 142 ILFLKVNFDENKQMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIKMHNTAR 201
           + FL+VN++E+K MC SL V VLP+F FYRG+ G++ SFSC+ A  +K +DA+  H   R
Sbjct: 149 VQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDR 208

Query: 202 CSIGPPRGV 210
           CS+GP +G+
Sbjct: 209 CSLGPTKGL 217

The following BLAST results are available for this feature:
BLAST of CmaCh00G002920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5TKD83.2e-6876.69Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os... [more]
Q8LCT32.1e-5960.59Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670... [more]
Q8LEK42.7e-5959.51Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160... [more]
Q10M181.6e-3844.57Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
Q6Z4N32.8e-3548.84Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=... [more]
BLAST of CmaCh00G002920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29670.17.1e-7162.16atypical CYS HIS rich thioredoxin 2 [more]
AT4G29670.21.5e-6060.59atypical CYS HIS rich thioredoxin 2 [more]
AT4G26160.11.9e-6059.51atypical CYS HIS rich thioredoxin 1 [more]
AT2G33270.13.3e-3643.66atypical CYS HIS rich thioredoxin 3 [more]
AT1G08570.11.3e-3548.06atypical CYS HIS rich thioredoxin 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 95..181
e-value: 8.0E-18
score: 64.3
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 65..198
score: 11.833357
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 71..199
e-value: 4.2E-23
score: 83.5
NoneNo IPR availablePANTHERPTHR43601:SF19THIOREDOXIN-LIKE 2, CHLOROPLASTICcoord: 1..223
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 1..223
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
NoneNo IPR availableCDDcd02947TRX_familycoord: 98..194
e-value: 1.41982E-22
score: 86.0728
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 113..131
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 81..194

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G002920.1CmaCh00G002920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0009507 chloroplast
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor