CmoCh17G013890.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G013890.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein IQ-DOMAIN 14-like
Location	Cmo_Chr17: 10751339 .. 10752310 (-)
Sequence length	666
RNA-Seq Expression	CmoCh17G013890.1
Synteny	CmoCh17G013890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAGTAAGTTCTGATGGTTGGGTTCGCTTTCGTTGAGAAAATGGCTTCAAATCAAACTCTAGATCACTGTTTGCAATGAAGTATTCTGATCTCGTTATCCAGGCATGGGTATAACAATATAAAAATAAAGCTCCATCCCAAACCCCTAAACCCCCAAACCCCGAAACCCCTAAACCCCTAAACCCAAAACCCAAAACCCTAAAACCCTATAATATGTACTGTAGTTGTGGAAGGCCAGTCCAAATTGAGCTGAAGCAGTTACGACAGACATTAGGGCTGCAGGGTTGTCATGGTGGTGGAATTGGTTAGAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

mRNA sequence

AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

Coding sequence (CDS)

AGATACACGTATGGGGTGGCATCGCTCTCCTCCACTGTCTCCTCACCAAAAATTGGAGTCCCACTTACTTCGAATACCTTCCAGGACCCAAGAGTCAATTACCTCCATCAAATGTTCCGTCGTCTGAACCTCAAACTCTCAATAATTTCCTTTTTGCACTTCAAACTCCACAACAAAACCCAACCCCAAGTATTAACAACAAACAACATCTACACAATATGGATCAAACAACTCTCACACCGAAGTCTACAAAATCAACCATCCCAAACCTCCCCGGCCGCGTTCCGAACCCTGCCTGCAAACTCGAGATCGTATTCAAGGCCGAGAAGCATTATTCATGGAACTGATTCTTCACCATTTGCTGTGGGACTTAGAGATGATGAAAGCCTCACGAGCTGCCCTCCTTTCTCAGTCCCACACTACATGGCTCCCACAGTTTCAGCCAAAGCCAAGCTAATAGGCTGCACCACCCCTACCTCTATGACCACTCAGTCCAAAACAAGGATTTCATTCCCTTTCAAGTGGAGCAAACCCAATTTGTTCTCAAATTCAAACAATAATTCATCATCAAATAATAACTCTCAAAGGGCTTTGGACAACAACCAATCGTTGCAATCTGTAGGCAATTTGAGTGTGGATTCTACTGTGTCCTTGCCTGCTGGGTAG

Protein sequence

RYTYGVASLSSTVSSPKIGVPLTSNTFQDPRVNYLHQMFRRLNLKLSIISFLHFKLHNKTQPQVLTTNNIYTIWIKQLSHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRALDNNQSLQSVGNLSVDSTVSLPAG

Homology

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy Swiss-Prot
Match: Q9M199 (Protein IQ-DOMAIN 13 OS=Arabidopsis thaliana OX=3702 GN=IQD13 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-18
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 115 TDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTP------TSMTTQSKTR 174
           T  SPF    +DD+SLTSCPPFS P YMAPTVSAKAKL   + P      T ++T  K R
Sbjct: 393 TQDSPF----KDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKERMDRTPVSTNEKRR 452

Query: 175 ISFP---FKWSKPNLF-SNSNNNSSSNNNSQRA--LDNNQSLQSVGNLSVDSTVSLPA 221
            SFP   FKW+K +LF SN++NN    ++S  A  L+ +++L+SVGNLS+DSTVS+PA
Sbjct: 453 SSFPLGSFKWNKGSLFMSNNSNNKGPGSSSSGAVVLEKHKTLKSVGNLSIDSTVSMPA 506

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy Swiss-Prot
Match: Q8LPG9 (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.8e-10
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A1S3CB25 (protein IQ-DOMAIN 14-like OS=Cucumis melo OX=3656 GN=LOC103498953 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 102/151 (67.55%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSP-FAVGLRDDESLTSCPPFSVPHYMA 145
           +PS+ SP  FRT  P  SRS+SR R I H   SSP F VG++DDESLTSCPPFSVPHYMA
Sbjct: 380 KPSRLSPNMFRTPPPGTSRSFSRARGIDH---SSPFFDVGIKDDESLTSCPPFSVPHYMA 439

Query: 146 PTVSAKAKLIGCTTPTSMT-TQSKTRISFPFKW-SKPN-LFSN--SNNNSSSNNNSQRAL 205
           PTVSAKAKL GC+TPT +T  QSKTRISFPFKW +KPN LFSN  SN +SS N NSQR L
Sbjct: 440 PTVSAKAKLRGCSTPTPITNNQSKTRISFPFKWNNKPNLLFSNNSSNKDSSPNINSQRGL 499

Query: 206 D--------NNQSLQSVGNLSVDSTVSLPAG 222
           D        NN + QSVGNLSVDS+ SLPAG
Sbjct: 500 DYNNNNNNNNNHNNQSVGNLSVDSSTSLPAG 527

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1KVB4 (protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111497546 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 86/144 (59.72%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SP AFRT P  +SR YSR +  ++G D  SP+ V L+DDESLTSCPPF+
Sbjct: 326 HHPILPKPTRNSPVAFRTPPGGSSRWYSRQKGSMNGADCCSPYDVALKDDESLTSCPPFT 385

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRA 199
           VP YM PTVSAKAKL GC TP  + T SKTR+SFPFKW+KPNLF+NS  + S + N+Q  
Sbjct: 386 VPRYMTPTVSAKAKLRGCATPPPLDTHSKTRLSFPFKWNKPNLFTNSKKD-SGDKNAQMG 445

Query: 200 LDNNQSLQSVGNLSVDSTVSLPAG 222
           L+  QSLQS  NLS+DST SLPAG
Sbjct: 446 LNKIQSLQSFSNLSLDSTASLPAG 468

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1H7V4 (protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111461242 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.8e-32
Identity = 86/145 (59.31%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPAAFRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAAFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS++ST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLESTASLPAG 464

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A0A0K994 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087690 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-31
Identity = 93/153 (60.78%), Postives = 108/153 (70.59%), Query Frame = 0


Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAP 145
           +PS+ SP  FRT  P  SRS+SR R     +    F +G++DDESLTSCPPFSVPHYMAP
Sbjct: 383 KPSRPSPNMFRTPPPGTSRSFSRARGSTDHSSPLFFDMGIKDDESLTSCPPFSVPHYMAP 442

Query: 146 TVSAKAKLIGCTTPTSMTT-------QSKTRISFPFKW--SKPNLFSN--SNNNSSSNNN 205
           TVSAKAKL  C+TPT +TT       QSKTRISFPF+W   KPNLFSN  SN N S N N
Sbjct: 443 TVSAKAKLRECSTPTPITTTTNNNNSQSKTRISFPFRWKNDKPNLFSNKSSNKNLSPNIN 502

Query: 206 SQRALD-----NNQSLQSVGNLSVDSTVSLPAG 222
           SQR LD     N+ + QS+GNLSVDS++SLPAG
Sbjct: 503 SQRGLDYNNNNNHNNNQSMGNLSVDSSISLPAG 535

[Close]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL
Match: A0A6J1DMF7 (protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111022581 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 95/152 (62.50%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 84  QNQPS-QTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYM 143
           +N P+ +T P AFRT PA+SR YSRPR   +G D SPF V L+DD+SLTSCPPFSVPHYM
Sbjct: 365 RNSPAFRTPPPAFRTPPASSR-YSRPRG--NGID-SPFDVPLKDDDSLTSCPPFSVPHYM 424

Query: 144 APTVSAKAKLIGCTTP------TSMTTQSKTRISFP-------FKWSKPNLFSNSNNNSS 203
           APTVSAKAKL G +TP       + T++SK RISFP       FKW+K NLFSN      
Sbjct: 425 APTVSAKAKLRGSSTPKERFVVVTPTSESKRRISFPFTQGLGSFKWNKGNLFSN------ 484

Query: 204 SNNNSQRALDNNQSLQSVGNLSVDSTVSLPAG 222
            +++SQR LD NQSLQS GNLSVDSTVSLPAG
Sbjct: 485 KDSSSQRVLDKNQSLQSAGNLSVDSTVSLPAG 506

[Close]

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_038907001.1 (protein IQ-DOMAIN 14-like [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-39
Identity = 97/136 (71.32%), Postives = 113/136 (83.09%), Query Frame = 0


Query: 86  QPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSVPHYMAPT 145
           +PS+TSP  FRT PA SRS+S+ R      DSSPF VG++DDESLTSCPPF+VPHYMAPT
Sbjct: 367 KPSRTSPNTFRTPPATSRSFSKARG-----DSSPFDVGIKDDESLTSCPPFTVPHYMAPT 426

Query: 146 VSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRALDNNQSLQ 205
           VSAKAKL GC+TPT ++T SKTRISFPFKW+KPNL    + +SS+NNNSQR LDNN + Q
Sbjct: 427 VSAKAKLRGCSTPTPISTHSKTRISFPFKWNKPNLL--FSKDSSANNNSQRVLDNNYN-Q 486

Query: 206 SVGNLSVDSTVSLPAG 222
           SVGNLSVDS+VSLPAG
Sbjct: 487 SVGNLSVDSSVSLPAG 494

[Close]

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_008460009.1 (PREDICTED: protein IQ-DOMAIN 14-like [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 2.5e-33
Identity = 102/151 (67.55%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 86  QPSQTSPAAFRT-LPANSRSYSRPRSIIHGTDSSP-FAVGLRDDESLTSCPPFSVPHYMA 145
           +PS+ SP  FRT  P  SRS+SR R I H   SSP F VG++DDESLTSCPPFSVPHYMA
Sbjct: 380 KPSRLSPNMFRTPPPGTSRSFSRARGIDH---SSPFFDVGIKDDESLTSCPPFSVPHYMA 439

Query: 146 PTVSAKAKLIGCTTPTSMT-TQSKTRISFPFKW-SKPN-LFSN--SNNNSSSNNNSQRAL 205
           PTVSAKAKL GC+TPT +T  QSKTRISFPFKW +KPN LFSN  SN +SS N NSQR L
Sbjct: 440 PTVSAKAKLRGCSTPTPITNNQSKTRISFPFKWNNKPNLLFSNNSSNKDSSPNINSQRGL 499

Query: 206 D--------NNQSLQSVGNLSVDSTVSLPAG 222
           D        NN + QSVGNLSVDS+ SLPAG
Sbjct: 500 DYNNNNNNNNNHNNQSVGNLSVDSSTSLPAG 527

[Close]

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_023004119.1 (protein IQ-DOMAIN 14-like [Cucurbita maxima])

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-33
Identity = 86/144 (59.72%), Postives = 106/144 (73.61%), Query Frame = 0


Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SP AFRT P  +SR YSR +  ++G D  SP+ V L+DDESLTSCPPF+
Sbjct: 326 HHPILPKPTRNSPVAFRTPPGGSSRWYSRQKGSMNGADCCSPYDVALKDDESLTSCPPFT 385

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTTQSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQRA 199
           VP YM PTVSAKAKL GC TP  + T SKTR+SFPFKW+KPNLF+NS  + S + N+Q  
Sbjct: 386 VPRYMTPTVSAKAKLRGCATPPPLDTHSKTRLSFPFKWNKPNLFTNSKKD-SGDKNAQMG 445

Query: 200 LDNNQSLQSVGNLSVDSTVSLPAG 222
           L+  QSLQS  NLS+DST SLPAG
Sbjct: 446 LNKIQSLQSFSNLSLDSTASLPAG 468

[Close]

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: XP_023513663.1 (protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-32
Identity = 87/145 (60.00%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPAAFRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAAFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS+DST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLDSTASLPAG 464

[Close]

BLAST of CmoCh17G013890.1 vs. NCBI nr
Match: KAG7025382.1 (Protein IQ-DOMAIN 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 7.9e-32
Identity = 86/145 (59.31%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 80  HRSLQNQPSQTSPAAFRTLP-ANSRSYSRPRSIIHGTD-SSPFAVGLRDDESLTSCPPFS 139
           H  +  +P++ SPA FRT P  +SR YSRP+  ++G +  SP+ V L+DDESLTSCPPF+
Sbjct: 321 HHQILPKPTRNSPAVFRTPPGGSSRWYSRPKGSMNGAECCSPYDVALKDDESLTSCPPFT 380

Query: 140 VPHYMAPTVSAKAKLIGCTTPTSMTT-QSKTRISFPFKWSKPNLFSNSNNNSSSNNNSQR 199
           VP YM PTVSAKAKL GC TP  + T  SKTR+SF FKW+KPNLFSNS  + S + N+Q 
Sbjct: 381 VPRYMTPTVSAKAKLRGCATPPPIDTHSSKTRLSFGFKWNKPNLFSNSKKD-SGDKNAQM 440

Query: 200 ALDNNQSLQSVGNLSVDSTVSLPAG 222
            L+  QSLQS+ NLS+DST SLPAG
Sbjct: 441 GLNKIQSLQSLSNLSLDSTASLPAG 464

[Close]

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT3G59690.1 (IQ-domain 13 )

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 115 TDSSPFAVGLRDDESLTSCPPFSVPHYMAPTVSAKAKLIGCTTP------TSMTTQSKTR 174
           T  SPF    +DD+SLTSCPPFS P YMAPTVSAKAKL   + P      T ++T  K R
Sbjct: 393 TQDSPF----KDDDSLTSCPPFSAPSYMAPTVSAKAKLRANSNPKERMDRTPVSTNEKRR 452

Query: 175 ISFP---FKWSKPNLF-SNSNNNSSSNNNSQRA--LDNNQSLQSVGNLSVDSTVSLPA 221
            SFP   FKW+K +LF SN++NN    ++S  A  L+ +++L+SVGNLS+DSTVS+PA
Sbjct: 453 SSFPLGSFKWNKGSLFMSNNSNNKGPGSSSSGAVVLEKHKTLKSVGNLSIDSTVSMPA 506

[Close]

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.2 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

[Close]

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.1 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 523 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 582

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 583 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 642

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 643 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 656

[Close]

BLAST of CmoCh17G013890.1 vs. TAIR 10
Match: AT2G43680.3 (IQ-domain 14 )

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-11
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 0


Query: 79  SHRSLQNQPSQTSPAAFRTLPANSRSYSRPRSIIHGTDSSPFAVGLRDDESLTSCPPFSV 138
           S RS  + PS       R +   +  YSR R  + G D SPF    +DD+SLTSCPPF  
Sbjct: 522 SSRSTFHTPS-------RPIHTGTSRYSRGR--LRGQD-SPF----KDDDSLTSCPPF-- 581

Query: 139 PHYMAPTVSAKAKLIGCTTPTSMT----TQSKTRISFP-----FKWSKPNL-FSNSNNNS 198
           P YMAPTVSAKAK+   + P           K R+S+P     F+W+K +L  SNS+++ 
Sbjct: 582 PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMSNSSSHR 641

Query: 199 SSNNNSQRALDNNQSLQSVGNLSVDSTVSL 219
              +     L+ +++L+SVGNLS+ ST S+
Sbjct: 642 GPGSPGGVVLEKHKTLKSVGNLSIGSTASM 655

The following BLAST results are available for this feature:

BLAST of CmoCh17G013890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M199	2.3e-18	53.39	Protein IQ-DOMAIN 13 OS=Arabidopsis thaliana OX=3702 GN=IQD13 PE=1 SV=1	[more]
Q8LPG9	6.8e-10	40.00	Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1	[more]

BLAST of CmoCh17G013890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB25	1.2e-33	67.55	protein IQ-DOMAIN 14-like OS=Cucumis melo OX=3656 GN=LOC103498953 PE=4 SV=1	[more]
A0A6J1KVB4	1.6e-33	59.72	protein IQ-DOMAIN 14-like OS=Cucurbita maxima OX=3661 GN=LOC111497546 PE=4 SV=1	[more]
A0A6J1H7V4	3.8e-32	59.31	protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111461242 PE=4 SV=...	[more]
A0A0A0K994	1.5e-31	60.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087690 PE=4 SV=1	[more]
A0A6J1DMF7	1.9e-31	62.50	protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111022581 PE=4 SV...	[more]

BLAST of CmoCh17G013890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907001.1	1.3e-39	71.32	protein IQ-DOMAIN 14-like [Benincasa hispida]	[more]
XP_008460009.1	2.5e-33	67.55	PREDICTED: protein IQ-DOMAIN 14-like [Cucumis melo]	[more]
XP_023004119.1	3.2e-33	59.72	protein IQ-DOMAIN 14-like [Cucurbita maxima]	[more]
XP_023513663.1	2.7e-32	60.00	protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025382.1	7.9e-32	59.31	Protein IQ-DOMAIN 14 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh17G013890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59690.1	1.6e-19	53.39	IQ-domain 13	[more]
AT2G43680.2	4.8e-11	40.00	IQ-domain 14	[more]
AT2G43680.1	4.8e-11	40.00	IQ-domain 14	[more]
AT2G43680.3	4.8e-11	40.00	IQ-domain 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025064	Domain of unknown function DUF4005	PFAM	PF13178	DUF4005	coord: 116..203 e-value: 5.1E-5 score: 23.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..221
None	No IPR available	PANTHER	PTHR32295	IQ-DOMAIN 5-RELATED	coord: 79..220
None	No IPR available	PANTHER	PTHR32295:SF113	IQ-DOMAIN 13	coord: 79..220

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh17G013890	CmoCh17G013890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013890.1:exon:861	CmoCh17G013890.1:exon:861	exon
CmoCh17G013890.1:exon:860	CmoCh17G013890.1:exon:860	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013890.1:cds	CmoCh17G013890.1:cds_2	CDS
CmoCh17G013890.1:cds	CmoCh17G013890.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh17G013890.1	CmoCh17G013890.1-protein	polypeptide