CmoCh08G011710.1 (mRNA) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTAAAATTTCCTACTCGTTTTACCATCTCTCTTCTTCTGCTCTCTGATTCTCTCTAAAATTTCGGGCTGTTCTTTTGCGGTTGGTTTTGTGGGTTTAATAGAAATGGCAACTGTCCCGCCACTTACAAATGGCGTCTCTGAGATTATTCAAGAGGTTGGGATTTCTTTTTTTTTTTTTTAATTTTTTTAATTTTGATTTCTTCTTCTTCTTTGCCTTTTGCATGTGGGTTTGTATTTTGATCCATTTTTCCATTGATTTTATGAATATTTTCAGCTGTTCTTAGAGCTTTGTAATCGATAATGTTCTGTTCTGAGAAATTAATGATCGTTTGTTTTGATTTAAGTGCGGAGGTTTATTTGAAACAGTTAATTTTATGTTTTCTGAGCTTAATTTGAGCTGAATTATTGTCGTTTTCCCGGACATGGCGTTGCGGCTGTCCTGTTTTTTTGGGGAAAGTTGTGTTTCTGTTTGTACTTTGTAGATCTTGAACAGTGTGTCGAGTTCTAGCTAAGAAGACAATGCTCTTAATATCATAAATTAGATCTATACCCTCCAGAATTCATTTGTGAATTTATCTGATAATCTTGCTTAATCTCTTATTTACGTTGTGTTTATGTTGTTTAGAAAGTTACACTGTAATAGGATCCGAATGGATGGATGTTTGGGGAATCTGTGATTCCGTACACTGGCTCGTGGGCTGGTTATCGCCCCGAGAGTACGTAGGGAGTTTGGGTTTGCATTTGTACTCCGAGTTCTTATTGTTAGAAATGAAAAATAAAATGTTGATTTTACAAAGAGGTGGGAAAGTATGTGAGATCCCACGTCGGTAAAAACTACGAGGCTAATGGTGATACGTAATGGGTCAAAGCGGACAATATGTTTGCTAGCGGTGGGCTTGAGCTGTTACAAATGGTACTAGAGCCACTCACCGGGTGGTGTACCAATGAGGACGTTAGCTTCTAAGAGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGAGAAATAAAACATTCCTTATAAGAGTATGGAAACCTCTCCCTAGCAAACGTGTTTTAAAAACTGTGAGGGTGATAGCGATACGTAACGAGCCAAAGTGGACAATATCTACTAGTGGTGAGTTTTAGCTGTTACAAATGGTATCAGAGCCAGTCATCGAGTAGTATGCCAGCAAGGACGCTGGCTCCCTAAGGGGGGTGGATTGTGATATCCCACATCGGTTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAAACGCATTTTAAAAACCGTGAGGCTGATGGCGATACGTAACGAGTCAAAACAGACAATATCTGCTAGGGGTGGGTTTGAGCTATATCATGAGTTATTTAGCGTGAACTTGGAGGACAGCCATTGACATATGAAGAACATTTTTGTTTTTGCTTTGTGAGTTCTTTCTGTGTAAATATGTATTGAACTGCTTAGATGGTCGATGAATCTAATTTGAACTCGAACATTTGTTATAAGCAGGAAGACAACCCGATTGTAAAATCTGTGAATGAGCAGACATCAGGTGGTGGACATAGTAGTAGACGTCCCGATATTTCCCTTCAAATACCCCCGAGATCGTCGAGTTTTGGTAAAAGCCGTAGCGGGAAAGGTTTACTGCAATCTCAAGCTTCCAGTAAAGGTGTTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCGCTTCTAAGTTCGGACCCGAAGTCAACTGCTGAAACTCCGATAGTAGCTGCTTTCGCTTCACACTTTTCATGGAAAAAATCCAACTCTCTCCCAGTGACTCCGGCCGCAAATTTGTCCCCCTCGGTTCCGCTCCCCGCCACAACAACCGCAATCGATGAAAGGCCAATCCCACGTGTGAGTTCTTTTTGTGTTACGAACTTCATTTCTTTTAAGTTTCATCGTACAAAAACTAGCTAGAATGTTAGTACTTACCATGAAAAAAGTTTTGTGAGATCCCACATTGGTCGGAGAGAAAATGAAACATTCTTTATAATAGTGTGTAAACCTCTCCCTAACATACACGTTTTAAAAACCGTGAGGCTGATGGCGATACGTAACGGGCCAAGGCAGGCAATATCTGCTAGTGATAGGCTTGGGTTGTTATAAATGATACCAGAGCCAGACATCGGACGGTGTGCCAAGGACACTGGATTCCCAAGGGGGTAGATTGTGAGATTCTAAATGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGAAGACCTCTCTCTAACATATATGTTTTAAAAATCGTGAGGCTGACGGCAATATGTAACGGGCCAAAGCGGATAACATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACTGGGCAGGGCGGTGTGCTAGCAAGGACGGTGGGTTCCCAAGGGGGGTGGATTGTGAGAATCGATTGGACGAAGCATTCCTTATAAGGGTGTGGATACCTCTCTCTAACATACACGTTTTAAAAACCGTGAGGCTGATGGTGATACGTAATGGGCCAAAGTAGACAATTTCTGCTAGTGATAGGCTTGGACTGTTATACATGATACCAGAGCCAGACATCGGGCGGTGTGCCAAGGAGTATGCTAGATTCCCAAGGGGGTAGATTGTGAGATCCTATATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTGAAGACCTCTCTCTAACATATACGTTTTAAAAACTGTGAGGCTGACGGCGATATGTAATGAGCCAAAGCAGATAACATCTGCTAGTGGTGGGCTTGGGCTATTACAAATGGTATGAGAGTTAGACACCGGGCGGTGTGCTAGCGAGGACGGTGGGTTCCTAAGGGGGGTGGATTGTGAGAATAGGTTAGAGAGGGAAACGAAGCATTCCGTATAAGGGTATGGATACCTCTCCCTAACATACACATTGTAAAAACCGTGAGGTTGATGGCGATACATAACGGACCAAAGCAGACAATATCTGCTAGCAATGGACTTGGGCTGTTACAAATGGTATCAAAGCCAGACACCGGAGAGTGTGCCAGTGATGACGCTAGGTTCCCAAAAGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAAACATTCTTATAAGGGTGTGGAGACCTCTCCCTAACATACGCGTCTTAAAAACCGTGAGGTTAACGGCGATACGTAACGGGTCAAAGCAGACAATATCTGCGAGTGGTGTGCTTAGGCTATTACAGGCTTATTGCTCGTTTCAGATTCGTAATTTGGTCTTTCGTTTTTAACTCATGCAGAAAGAAGCAGCCCGTGCAGTTTCGAGGTCTCTATCCGTGCCCAGTAGAAGTATCGTTATAGTGCGATCGACATCTTTCGCTATCCCTAAAGCAACTTCTGAGGCGAGTACAAGTTCTGGTATAAATCCACATACCCTAAAGCAACTTATGTATCACTTTAATATTGCGCAGAAGGATGAAATTAAAATTTCAAAAAGATTAGGGGCGGAATTTAAAAAAAACACAAACATTAGGGGCCTTATTGTAAATTATTTGATGTATCAGATCAAGATGGTTCTGTTACCTTAGAAAATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATTTGCCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTATGTAGGCAAGAGGTAAAGAATTTACCCGTCACGTTACTCCGCATTCCGACCACCTCTCAACGGGACGGTGGACCGCTGCATAATCGAGCGGTTTCCCGCTCACAGATGTTGAGGTATTGCAATGGCTCGTCATGATTTACGATGTTCGGAAATTCGTTTCCCGGTTGTGGAAACTGTACTTAAAGTTCTATATTTGTTGCAGTGCTTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTATGTCATTTGCTATGATAGAGGAAATTGATTGAATTTTGAACTACGTTAGGAATTTGTGAGATCTCACGTCGGTTGGAGAGGGGAGCGGAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGAACAATATCTGCTAGCGGTGGGTCTAGGCTATTACAAATGATATCAGAGCCAGACACGGAATGATATGCTAGTAGGAACGCTGGCCCCGAAGAGGGTGGATTTGGGTGTCCTACATCGATTGGAGAAGGGAATGAGTACCAACGAGGACGTTGGGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATTGGTTGGAAAGGGAAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTCTAAAAACCTAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTATTACAGATGGTATCACAGCCAGACATCGAACGATGTGCCAGCGAGGAGGCTGAGCTCCGAAGGGGGTGGACACGAAGCGGTGTGCCAGCAAGGATGCTGGCTCTGAAAGGGGGTGGATTGGGGGTCCCACATCGATTGGAGAAGAGAATGAATGCTAATGAGGACGTTGGGTCCCGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAGGGAAGACCAAAGAGGACAATATCTGTTAGCGGTGGGTTTGGGCTGTTATAGAATTTGTATTCACATCGTGTTTGGATTAAGATATTGTTCGATCATGTTTTTGTTCATATCGAGCTATAATATAGTGTTTTTGCCTTCGGATTGTTCGTTTTTAGGTTCATGACTTGAGGACTAAGGCAATCATTTACGCTGTGCCTTCTGCGTTGGTGTTTGGTCTCATGTCATCGATATTCTCCGTCGTCCTCGGTATAGTTTTACGCAAAATCTTAAATATTTTCTATAGCTGATTTATGAGTCTCCTAATTTGCTTGCTTGCTTAACTTTGCAGCAATCAAGGAGTATATATGGACATTTGCAGCTCTAGAGTTCGCACTTGTAGCTATCATTCTTCATCTATTCTATACTTTGGTGAGTAAAATCTTCATGCATCGGGCATAGCACAATGTTAGTCTGATTTCTGTGAGATCTAATTCAATCTTAAAGTGGCTTGGAAAGAGAGCCACTATGTTAAGGGTTAACGAACAGATATACGAGCGAGTCGATTCAGGCTGCTTGTTGGCACAACAAAAAAAAACGATTTTTGAAACCAAACTGACCCGACTAACGACTTTATTTTAGACCATCAGAATCGAACTATTAGAATTATGGGTTCATTGAAACTGAAGCTGCCAAATTCAAATGCTTTTAACTCGTGAAAAAATATGTAACAGCCCAAATCCACTGCTAACAAATATTGTTCTTTTTGGATTTTCCTTTACGGGTTTCCTTTCAAAGTTTTTAAAATGCGTCTACTAGAGAGAAGTTTCCACCCCCTTGAGGTCCCAGCGTTCTCGTTGGCACACTGCCTGGTGTTTGGTTCTGGAACGAGTGCCAATAAGAACGCTGGGACCCGAAAGAAGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTTGTAGATGCGTCTTAAAAACTTTGAGGGAAAGCTCGAAAGGAAAAGCCCAAAGGGAAAAATATCTGCTAGCGGTGAGCTTGGGTCGTTGTGAAGACGATCTTACCGGCTACCGCTATAGCTTCCTTTGTAACATTTCCCCCAGCTGCATTTGGACTTCCTTCTTTTCTGCATTTTGCATTGGAAAGTTAGAAACCTCAACTTCCTTACTACATCTTATTGACAATCTTTTGGTCTTATTTGCAGCTGAAACTGAAGATCTTATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGCGGCTATGAGCCTGAACTCTGTATACATTCATTACTACATGTGGCGACTTCGAGTCGCACAAAACCCCAACCCAGTATGACCTAATTCCGAAGACGATAAGCCCGTCTTCTGAATCTTCCTTTCCGAACATCTACATTACCAGCGATATTCCAATGCAAGAAGAGCGAAATGCAGATAGTTAGCAAGCAATGACCATCGTCGTCGAAGATTCAAGTCAAGATTTAAGTATGAATAGACGAGCTCGAGCTGCAACGGATAACAATGAAAGAAGATTATGCTTGAACTTCGAAGACGAGTATCCCTTGAAGACCTATATATTTTGTATAGCAAATTGTGTTCAGGACACGATCTAAATTGCACATTTCTGGTGTATTTCTTAGCAATTCTACGTTCACAGGACTTCAAACTTAAAGGCCATAAGAGCATCGATTGTGCCGGCTTGTATATTTTTAGCAGAAGGTCCAATCTTGAGTGGTTTTTCAACTTTTATGAGCGAAATGAGACAACACCAATCTTGTAGCAAAAAAAATTTGATGATATAAATTTAATAAATAAGAACTAAAAACATTGCCACA CATTAAAATTTCCTACTCGTTTTACCATCTCTCTTCTTCTGCTCTCTGATTCTCTCTAAAATTTCGGGCTGTTCTTTTGCGGTTGGTTTTGTGGGTTTAATAGAAATGGCAACTGTCCCGCCACTTACAAATGGCGTCTCTGAGATTATTCAAGAGGAAGACAACCCGATTGTAAAATCTGTGAATGAGCAGACATCAGGTGGTGGACATAGTAGTAGACGTCCCGATATTTCCCTTCAAATACCCCCGAGATCGTCGAGTTTTGGTAAAAGCCGTAGCGGGAAAGGTTTACTGCAATCTCAAGCTTCCAGTAAAGGTGTTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCGCTTCTAAGTTCGGACCCGAAGTCAACTGCTGAAACTCCGATAGTAGCTGCTTTCGCTTCACACTTTTCATGGAAAAAATCCAACTCTCTCCCAGTGACTCCGGCCGCAAATTTGTCCCCCTCGGTTCCGCTCCCCGCCACAACAACCGCAATCGATGAAAGGCCAATCCCACGTAAAGAAGCAGCCCGTGCAGTTTCGAGGTCTCTATCCGTGCCCAGTAGAAGTATCGTTATAGTGCGATCGACATCTTTCGCTATCCCTAAAGCAACTTCTGAGGCGAGTACAAGTTCTGATCAAGATGGTTCTGTTACCTTAGAAAATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATTTGCCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTATGTAGGCAAGAGGTAAAGAATTTACCCGTCACGTTACTCCGCATTCCGACCACCTCTCAACGGGACGGTGGACCGCTGCATAATCGAGCGGTTTCCCGCTCACAGATGTTGAGTGCTTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTTCATGACTTGAGGACTAAGGCAATCATTTACGCTGTGCCTTCTGCGTTGGTGTTTGGTCTCATGTCATCGATATTCTCCGTCGTCCTCGCAATCAAGGAGTATATATGGACATTTGCAGCTCTAGAGTTCGCACTTGTAGCTATCATTCTTCATCTATTCTATACTTTGCTGAAACTGAAGATCTTATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGCGGCTATGAGCCTGAACTCTGTATACATTCATTACTACATGTGGCGACTTCGAGTCGCACAAAACCCCAACCCAGTATGACCTAATTCCGAAGACGATAAGCCCGTCTTCTGAATCTTCCTTTCCGAACATCTACATTACCAGCGATATTCCAATGCAAGAAGAGCGAAATGCAGATAGTTAGCAAGCAATGACCATCGTCGTCGAAGATTCAAGTCAAGATTTAAGTATGAATAGACGAGCTCGAGCTGCAACGGATAACAATGAAAGAAGATTATGCTTGAACTTCGAAGACGAGTATCCCTTGAAGACCTATATATTTTGTATAGCAAATTGTGTTCAGGACACGATCTAAATTGCACATTTCTGGTGTATTTCTTAGCAATTCTACGTTCACAGGACTTCAAACTTAAAGGCCATAAGAGCATCGATTGTGCCGGCTTGTATATTTTTAGCAGAAGGTCCAATCTTGAGTGGTTTTTCAACTTTTATGAGCGAAATGAGACAACACCAATCTTGTAGCAAAAAAAATTTGATGATATAAATTTAATAAATAAGAACTAAAAACATTGCCACA ATGGCAACTGTCCCGCCACTTACAAATGGCGTCTCTGAGATTATTCAAGAGGAAGACAACCCGATTGTAAAATCTGTGAATGAGCAGACATCAGGTGGTGGACATAGTAGTAGACGTCCCGATATTTCCCTTCAAATACCCCCGAGATCGTCGAGTTTTGGTAAAAGCCGTAGCGGGAAAGGTTTACTGCAATCTCAAGCTTCCAGTAAAGGTGTTTTATCTCCAGGAAGCTTCTTAAGGGCTTTAAGCTTTAAGAGAAAAGGCATTGCTGCTGAAGGTGAGAGAAGTTCGCTTCTAAGTTCGGACCCGAAGTCAACTGCTGAAACTCCGATAGTAGCTGCTTTCGCTTCACACTTTTCATGGAAAAAATCCAACTCTCTCCCAGTGACTCCGGCCGCAAATTTGTCCCCCTCGGTTCCGCTCCCCGCCACAACAACCGCAATCGATGAAAGGCCAATCCCACGTAAAGAAGCAGCCCGTGCAGTTTCGAGGTCTCTATCCGTGCCCAGTAGAAGTATCGTTATAGTGCGATCGACATCTTTCGCTATCCCTAAAGCAACTTCTGAGGCGAGTACAAGTTCTGATCAAGATGGTTCTGTTACCTTAGAAAATGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGTAGAATTTGCCTTGAACCATGCGAAGAAGAAAACACTCTCAAAATGGAATGCAGTTGCAAAGGAGCCCTTAGGCTTTTACATAAAGATTGTGCAATAGAATGGTTTAGCAGAAAAGGAAACAAGAACTGTGAAGTATGTAGGCAAGAGGTAAAGAATTTACCCGTCACGTTACTCCGCATTCCGACCACCTCTCAACGGGACGGTGGACCGCTGCATAATCGAGCGGTTTCCCGCTCACAGATGTTGAGTGCTTGGCAGGACTTTGTGGTGCTTGTTTTAATCAGCACAATATGCTACTTCTTCTTCCTTGAGCAGCTTCTGGTTCATGACTTGAGGACTAAGGCAATCATTTACGCTGTGCCTTCTGCGTTGGTGTTTGGTCTCATGTCATCGATATTCTCCGTCGTCCTCGCAATCAAGGAGTATATATGGACATTTGCAGCTCTAGAGTTCGCACTTGTAGCTATCATTCTTCATCTATTCTATACTTTGCTGAAACTGAAGATCTTATATGCCATATTGCTGTCTGCAATCTTGGGTTTTGGTGCGGCTATGAGCCTGAACTCTGTATACATTCATTACTACATGTGGCGACTTCGAGTCGCACAAAACCCCAACCCAGTATGA MATVPPLTNGVSEIIQEEDNPIVKSVNEQTSGGGHSSRRPDISLQIPPRSSSFGKSRSGKGLLQSQASSKGVLSPGSFLRALSFKRKGIAAEGERSSLLSSDPKSTAETPIVAAFASHFSWKKSNSLPVTPAANLSPSVPLPATTTAIDERPIPRKEAARAVSRSLSVPSRSIVIVRSTSFAIPKATSEASTSSDQDGSVTLENDEEIPEEEAVCRICLEPCEEENTLKMECSCKGALRLLHKDCAIEWFSRKGNKNCEVCRQEVKNLPVTLLRIPTTSQRDGGPLHNRAVSRSQMLSAWQDFVVLVLISTICYFFFLEQLLVHDLRTKAIIYAVPSALVFGLMSSIFSVVLAIKEYIWTFAALEFALVAIILHLFYTLLKLKILYAILLSAILGFGAAMSLNSVYIHYYMWRLRVAQNPNPV Homology
BLAST of CmoCh08G011710.1 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.1e-08 Identity = 38/116 (32.76%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. ExPASy TrEMBL
Match: A0A6J1ER12 (uncharacterized protein LOC111436767 OS=Cucurbita moschata OX=3662 GN=LOC111436767 PE=4 SV=1) HSP 1 Score: 792.3 bits (2045), Expect = 9.6e-226 Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. ExPASy TrEMBL
Match: A0A6J1KIU9 (uncharacterized protein LOC111494848 OS=Cucurbita maxima OX=3661 GN=LOC111494848 PE=4 SV=1) HSP 1 Score: 765.4 bits (1975), Expect = 1.3e-217 Identity = 410/423 (96.93%), Postives = 413/423 (97.64%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. ExPASy TrEMBL
Match: A0A1S3C838 (E3 ubiquitin-protein ligase MARCH7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497891 PE=4 SV=1) HSP 1 Score: 642.1 bits (1655), Expect = 1.6e-180 Identity = 344/424 (81.13%), Postives = 380/424 (89.62%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. ExPASy TrEMBL
Match: A0A0A0KEI7 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G067930 PE=4 SV=1) HSP 1 Score: 636.3 bits (1640), Expect = 8.8e-179 Identity = 341/423 (80.61%), Postives = 378/423 (89.36%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. ExPASy TrEMBL
Match: A0A6J1CA05 (uncharacterized protein LOC111009750 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009750 PE=4 SV=1) HSP 1 Score: 626.7 bits (1615), Expect = 7.0e-176 Identity = 338/425 (79.53%), Postives = 374/425 (88.00%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. NCBI nr
Match: XP_022930264.1 (uncharacterized protein LOC111436767 [Cucurbita moschata]) HSP 1 Score: 792.3 bits (2045), Expect = 2.0e-225 Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. NCBI nr
Match: KAG6593940.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 786.2 bits (2029), Expect = 1.4e-223 Identity = 418/423 (98.82%), Postives = 421/423 (99.53%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. NCBI nr
Match: XP_023514257.1 (uncharacterized protein LOC111778580 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 783.5 bits (2022), Expect = 9.3e-223 Identity = 416/423 (98.35%), Postives = 420/423 (99.29%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. NCBI nr
Match: XP_023000610.1 (uncharacterized protein LOC111494848 [Cucurbita maxima]) HSP 1 Score: 765.4 bits (1975), Expect = 2.6e-217 Identity = 410/423 (96.93%), Postives = 413/423 (97.64%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. NCBI nr
Match: XP_038906457.1 (uncharacterized protein LOC120092441 [Benincasa hispida]) HSP 1 Score: 657.5 bits (1695), Expect = 7.7e-185 Identity = 350/424 (82.55%), Postives = 383/424 (90.33%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. TAIR 10
Match: AT3G06330.1 (RING/U-box superfamily protein ) HSP 1 Score: 352.8 bits (904), Expect = 3.8e-97 Identity = 212/402 (52.74%), Postives = 272/402 (67.66%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. TAIR 10
Match: AT3G06330.2 (RING/U-box superfamily protein ) HSP 1 Score: 298.5 bits (763), Expect = 8.4e-81 Identity = 156/257 (60.70%), Postives = 201/257 (78.21%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. TAIR 10
Match: AT5G18760.1 (RING/U-box superfamily protein ) HSP 1 Score: 282.0 bits (720), Expect = 8.2e-76 Identity = 187/399 (46.87%), Postives = 243/399 (60.90%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. TAIR 10
Match: AT3G06330.3 (RING/U-box superfamily protein ) HSP 1 Score: 269.6 bits (688), Expect = 4.2e-72 Identity = 170/336 (50.60%), Postives = 216/336 (64.29%), Query Frame = 0
BLAST of CmoCh08G011710.1 vs. TAIR 10
Match: AT5G60580.1 (RING/U-box superfamily protein ) HSP 1 Score: 193.7 bits (491), Expect = 2.9e-49 Identity = 153/432 (35.42%), Postives = 229/432 (53.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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