CmoCh06G003010 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATGGCTAGGGGGTTTGCAAGATTTGTGAACATTAGGGATGGGGATGGCTCAACTCCATTGCATTTATCCGCCAGGCAGAGCCAACCTGAGTGTGTCCGTATCCTTCTTAGCAATGGTGCTCTTGTCTGTGTCTCCACTTGCAGGTATGAGGAATGATCTTTCATTCGTTCATTCTGAGTATATCCAGAGAATGATGGATTGTTGTGAATATGTTATGCAGTTGTCCAGGTAGTTCGCCACTCCATTTAGCTGCTCGTGGTGGTTCCTTGGAATGTGTTCGAGAATTGCTGGCTTGGGGAGCTGACAGATTTCAGTACGATTCATATGGGTAAGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAGAGTTATAACCATGCTTTTCTTAAAACAGGCACAATTTAGAAGTAAACAATGGAACTCCTAATGAAGTTTTCTCAAGGTATCTGCTTGACCATTTGCAGGAGGATACCATTTACCGTTGCTTTAAAGCATAAGCATCAAGCTTGTGCAGCTTTGTTGAACCCTTCATCACCAGAACCTCTCGTCTGGCCTTCACCATTGAAGTTAATCATTGAGCTACATCCAGATGCAAAAGTTTTGCTAGAAAAGGCCTTGATGGATGCAAACATGGAGAGAGAGAAGGCCATATTTAAGGAAACATTCGTCACACCTCCTTGTCCTTTCCAATCTGATTTGGACATTGATTCTGATTTAGACAATGATTTAGCATCTGAGGTAATTCAAACACACTTCATTTTGGGTTTTTTGTCGAATAATTTCAAGTCAGGTGTCAATACATGAATGCAATGAATCTGGAAAGGATTTTTTAACGGCCTAAGCTCACCGCTAGCAGAAATTGTCATCTTTGGACCTTTCCTTCTGAGCTTCCCCTTAAGGTTGTAAGCATCCGTTAAGGAGAAGTTTACACACTCTTATAAGGAGTGCTTCATTCTCCTCTTGAATCGATGTGGAATCTCACAATCCATCTTTTCGGGGCCAGTGTCCCCGCTGGTACACCGCTCTATGCTTGGCTCTTATACTATTTGTAATAGCCCAAACCCACCTCTAGTAGATATTGTCGTCTTTCAGCTTTTTCTTTGAGCTTCCCTTCAAGGTTTTAAAACTCATCCGTTAGGAAGAGATTTCCACCCCTTATAAGAAATGCTTCGTTCCCTCAACATTCGAGGTGGGATCTCACATATTCCCTTCTCAATGTTCTAGTTTTACTTCTTGGGATACTGCTCTGTTGCTTATGTTTCGATTTCTGTAATTAATTTGGTCAAGACTATAGCTCATAACTATGTCCGCAACATTCTTACATCACTCGTTGATTCTATCATACGAACAGGCTAGCGATACAGAGTTGTGCAGCATATGCTTTGAACAGATGTGCAATATTGAGGCTCAACCATGTGGCCATAGAATGTGCGCCCATTGTACATTATCTTTATGCTGCCATAAGAAGCCTAATCCAACTACAGCTTGTCCAACAGCCCCTGTTTGCCCCTTTTGCAGAGGCAGCATCACCCAGCTTCTCGTTGCTGAGGTGAAGAGTCATGACAAGGTAGACCAAGAGATTTCCCCCTTGAAGCTGAAGGGGTTGACAACGTCAAATTTCAATGAAGAAAACACCAGCTTGAAGAGCTTATCTATCCTATTTGGGAAGTTGAGTGAACAAAATTCAGGGACATGTGTTAAGTCTTAA ATGGAAATGGCTAGGGGGTTTGCAAGATTTGTGAACATTAGGGATGGGGATGGCTCAACTCCATTGCATTTATCCGCCAGGCAGAGCCAACCTGAGTGTGTCCGTATCCTTCTTAGCAATGGTGCTCTTGTCTGTGTCTCCACTTGCAGTTGTCCAGGTAGTTCGCCACTCCATTTAGCTGCTCGTGGTGGTTCCTTGGAATGTGTTCGAGAATTGCTGGCTTGGGGAGCTGACAGATTTCAGTACGATTCATATGGGAGGATACCATTTACCGTTGCTTTAAAGCATAAGCATCAAGCTTGTGCAGCTTTGTTGAACCCTTCATCACCAGAACCTCTCGTCTGGCCTTCACCATTGAAGTTAATCATTGAGCTACATCCAGATGCAAAAGTTTTGCTAGAAAAGGCCTTGATGGATGCAAACATGGAGAGAGAGAAGGCCATATTTAAGGAAACATTCGTCACACCTCCTTGTCCTTTCCAATCTGATTTGGACATTGATTCTGATTTAGACAATGATTTAGCATCTGAGGCTAGCGATACAGAGTTGTGCAGCATATGCTTTGAACAGATGTGCAATATTGAGGCTCAACCATGTGGCCATAGAATGTGCGCCCATTGTACATTATCTTTATGCTGCCATAAGAAGCCTAATCCAACTACAGCTTGTCCAACAGCCCCTGTTTGCCCCTTTTGCAGAGGCAGCATCACCCAGCTTCTCGTTGCTGAGGTGAAGAGTCATGACAAGGTAGACCAAGAGATTTCCCCCTTGAAGCTGAAGGGGTTGACAACGTCAAATTTCAATGAAGAAAACACCAGCTTGAAGAGCTTATCTATCCTATTTGGGAAGTTGAGTGAACAAAATTCAGGGACATGTGTTAAGTCTTAA ATGGAAATGGCTAGGGGGTTTGCAAGATTTGTGAACATTAGGGATGGGGATGGCTCAACTCCATTGCATTTATCCGCCAGGCAGAGCCAACCTGAGTGTGTCCGTATCCTTCTTAGCAATGGTGCTCTTGTCTGTGTCTCCACTTGCAGTTGTCCAGGTAGTTCGCCACTCCATTTAGCTGCTCGTGGTGGTTCCTTGGAATGTGTTCGAGAATTGCTGGCTTGGGGAGCTGACAGATTTCAGTACGATTCATATGGGAGGATACCATTTACCGTTGCTTTAAAGCATAAGCATCAAGCTTGTGCAGCTTTGTTGAACCCTTCATCACCAGAACCTCTCGTCTGGCCTTCACCATTGAAGTTAATCATTGAGCTACATCCAGATGCAAAAGTTTTGCTAGAAAAGGCCTTGATGGATGCAAACATGGAGAGAGAGAAGGCCATATTTAAGGAAACATTCGTCACACCTCCTTGTCCTTTCCAATCTGATTTGGACATTGATTCTGATTTAGACAATGATTTAGCATCTGAGGCTAGCGATACAGAGTTGTGCAGCATATGCTTTGAACAGATGTGCAATATTGAGGCTCAACCATGTGGCCATAGAATGTGCGCCCATTGTACATTATCTTTATGCTGCCATAAGAAGCCTAATCCAACTACAGCTTGTCCAACAGCCCCTGTTTGCCCCTTTTGCAGAGGCAGCATCACCCAGCTTCTCGTTGCTGAGGTGAAGAGTCATGACAAGGTAGACCAAGAGATTTCCCCCTTGAAGCTGAAGGGGTTGACAACGTCAAATTTCAATGAAGAAAACACCAGCTTGAAGAGCTTATCTATCCTATTTGGGAAGTTGAGTGAACAAAATTCAGGGACATGTGTTAAGTCTTAA MEMARGFARFVNIRDGDGSTPLHLSARQSQPECVRILLSNGALVCVSTCSCPGSSPLHLAARGGSLECVRELLAWGADRFQYDSYGRIPFTVALKHKHQACAALLNPSSPEPLVWPSPLKLIIELHPDAKVLLEKALMDANMEREKAIFKETFVTPPCPFQSDLDIDSDLDNDLASEASDTELCSICFEQMCNIEAQPCGHRMCAHCTLSLCCHKKPNPTTACPTAPVCPFCRGSITQLLVAEVKSHDKVDQEISPLKLKGLTTSNFNEENTSLKSLSILFGKLSEQNSGTCVKS Homology
BLAST of CmoCh06G003010 vs. ExPASy Swiss-Prot
Match: Q94B55 (Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana OX=3702 GN=XBAT31 PE=2 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 3.7e-88 Identity = 173/304 (56.91%), Postives = 214/304 (70.39%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy Swiss-Prot
Match: Q65XV2 (E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica OX=39947 GN=XB3 PE=1 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86 Identity = 163/290 (56.21%), Postives = 202/290 (69.66%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy Swiss-Prot
Match: Q94CT7 (Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS31 PE=2 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-70 Identity = 137/244 (56.15%), Postives = 171/244 (70.08%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy Swiss-Prot
Match: Q4FE45 (E3 ubiquitin-protein ligase XBAT33 OS=Arabidopsis thaliana OX=3702 GN=XBAT33 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.4e-17 Identity = 67/239 (28.03%), Postives = 102/239 (42.68%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy Swiss-Prot
Match: Q337A0 (Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS33 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.5e-15 Identity = 66/239 (27.62%), Postives = 100/239 (41.84%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1GBC7 (putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita moschata OX=3662 GN=LOC111452429 PE=4 SV=1) HSP 1 Score: 595.9 bits (1535), Expect = 9.2e-167 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1I3N0 (putative E3 ubiquitin-protein ligase XBAT31 OS=Cucurbita maxima OX=3661 GN=LOC111470249 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.3e-165 Identity = 287/290 (98.97%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy TrEMBL
Match: A0A6J1CX01 (putative E3 ubiquitin-protein ligase XBAT31 OS=Momordica charantia OX=3673 GN=LOC111014993 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 4.5e-145 Identity = 251/286 (87.76%), Postives = 266/286 (93.01%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy TrEMBL
Match: A0A5A7TRQ8 (Putative E3 ubiquitin-protein ligase XBAT31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001730 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144 Identity = 250/290 (86.21%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CmoCh06G003010 vs. ExPASy TrEMBL
Match: A0A1S3B5H1 (putative E3 ubiquitin-protein ligase XBAT31 OS=Cucumis melo OX=3656 GN=LOC103486391 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144 Identity = 250/290 (86.21%), Postives = 271/290 (93.45%), Query Frame = 0
BLAST of CmoCh06G003010 vs. TAIR 10
Match: AT2G28840.1 (XB3 ortholog 1 in Arabidopsis thaliana ) HSP 1 Score: 326.2 bits (835), Expect = 2.6e-89 Identity = 173/304 (56.91%), Postives = 214/304 (70.39%), Query Frame = 0
BLAST of CmoCh06G003010 vs. TAIR 10
Match: AT2G28840.2 (XB3 ortholog 1 in Arabidopsis thaliana ) HSP 1 Score: 326.2 bits (835), Expect = 2.6e-89 Identity = 173/304 (56.91%), Postives = 214/304 (70.39%), Query Frame = 0
BLAST of CmoCh06G003010 vs. TAIR 10
Match: AT5G07270.1 (XB3 ortholog 3 in Arabidopsis thaliana ) HSP 1 Score: 90.5 bits (223), Expect = 2.4e-18 Identity = 67/239 (28.03%), Postives = 102/239 (42.68%), Query Frame = 0
BLAST of CmoCh06G003010 vs. TAIR 10
Match: AT5G57740.1 (XB3 ortholog 2 in Arabidopsis thaliana ) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12 Identity = 61/240 (25.42%), Postives = 93/240 (38.75%), Query Frame = 0
BLAST of CmoCh06G003010 vs. TAIR 10
Match: AT5G13530.1 (protein kinases;ubiquitin-protein ligases ) HSP 1 Score: 58.9 bits (141), Expect = 7.8e-09 Identity = 36/116 (31.03%), Postives = 52/116 (44.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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