CmoCh05G003850 (gene) Cucurbita moschata (Rifu) v1

BLAST of CmoCh05G003850 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 1671.4 bits (4327), Expect = 0.0e+00
Identity = 800/1225 (65.31%), Postives = 972/1225 (79.35%), Query Frame = 0

Query: 1    MGSE-ESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MGSE   +K VVTQVSIGGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+F+I
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   VNVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + +++   D+YKKV PHAFVHFA+ +SA  A+ AAG+  L L+ + LKVSLGP++PY +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRRT VP+KL+ + ++IG L  +D F V+WR  + G+DFLVDPFD TCKFCF + TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKS 240
            SFKD   H V+ CDYK+E LVRDI  +++Y  +  +V++LQL SSP +WYRTADDDI  +
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP DLLDDDDPWIRTTDFT  GAIGRC++YRV + PRY  KL  A++Y + +RV +  ++
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCIH+KE ISFE++FLVN+V+H+G+ NQ Q+T+RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            QP +V++A+L H+ TY+ PV DA KRLKLVQEW+ KNP+L    ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRR+K VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT VF R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFF+E     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQE 600
            +F +KNVAKCAAR+G CFSSTYAT++V  + V+ ++PD+ERN Y+FSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKLG-GSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 660
            V +KLKL     PCAYQIRYAG KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+ +L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L V++G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 900
            HH+YDCL+FPQ G+RPHTNEASGSDLDGDLYF+ WD+ LIPP+RKS+P M+Y AAE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  TREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHA 960
             R V                           + +DI++FFA+N+ NE LGTICNAHVVHA
Sbjct: 901  GRAV---------------------------NHQDIIDFFARNLANEQLGTICNAHVVHA 960

Query: 961  DRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKI 1020
            DRSEYGA+DE C+ L+ELAATAVDFPKTGKIV+MP HLKPKLYPDFMGK+  Q+YKS KI
Sbjct: 961  DRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKI 1020

Query: 1021 LGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSG 1080
            LGR+YRR+++ YDED   + E +  P  + YD  LE+ G  D I EAW  KC YDGQL G
Sbjct: 1021 LGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIG 1080

Query: 1081 LLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQ 1140
            LLGQYKV +EEEIVTGHIWSMPKY+S+KQGELKE+LKHSY++LKKEFR+VFE   P+ E 
Sbjct: 1081 LLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHEN 1140

Query: 1141 LTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKI 1200
            L+++E+N LYE+KASAWY V YHP W+KKS+EL++PD S    MLSF WIAADYLARIKI
Sbjct: 1141 LSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKI 1196

Query: 1201 KCRKMKSFDPTKPINSLASYLSDRI 1224
            + R+M S D  KP++SLA +L+ R+
Sbjct: 1201 RSREMGSIDSAKPVDSLAKFLAQRL 1196

BLAST of CmoCh05G003850 vs. ExPASy Swiss-Prot
Match: Q8LHH9 (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1)

HSP 1 Score: 1409.8 bits (3648), Expect = 0.0e+00
Identity = 696/1225 (56.82%), Postives = 877/1225 (71.59%), Query Frame = 0

Query: 9    IVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI----VNVAD 68
            +V TQVS+GGFD+ V A DL  +LE E+GLV RCR+KTSWTPP+SYPDF +     + + 
Sbjct: 27   LVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASA 86

Query: 69   VVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRR 128
                  Y +V PHAFVHFA P+ A  A   AG   L L  + L+V+  P+S   V+ RR 
Sbjct: 87   AAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVS-RRS 146

Query: 129  TKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDN 188
            +  PF+  +V +++G L     F  AWRGP +G+D  VDPFDG C+  FTRDTAF+F   
Sbjct: 147  SIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGF 206

Query: 189  NKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSVPYDL 248
             +   ++CD K+EF VRD+ +++ Y   L   +LL+L ++P + YRTADDD  + VP+DL
Sbjct: 207  REVAAIRCDVKLEFPVRDVLEVRLYR--LDCSLLLRLAAAPLVHYRTADDDFHEPVPFDL 266

Query: 249  LDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASL------ 308
            LDDDDPWIRTTD T SGAIGRC  YR+S   R+  K++ A++Y++E+RV           
Sbjct: 267  LDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWGP 326

Query: 309  KRPPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLR 368
            +R   + +E ++G  M D FFC+ + E + F LLF+VNA++HKGIINQHQ+T  FF LL 
Sbjct: 327  RRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLLG 386

Query: 369  NQPNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVIT 428
                 V++AAL      + PV DAC RLK     + +NP+L   SK   D  E+RRLVIT
Sbjct: 387  RSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKL-LCSKVGDDHAEVRRLVIT 446

Query: 429  PSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 488
            P++AYC PPEVE SNRVLR + +VADRFLRVTFMDEGM+ +N++V   + APIVK++ S+
Sbjct: 447  PTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMSN 506

Query: 489  SFPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWM 548
             F QKT V+ R++ +L  GF++CGRKYSFLA+SSNQLRD+SAWFF+E +  TV++I +WM
Sbjct: 507  FFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKWM 566

Query: 549  GRFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQ 608
            GRFT+KNVAK AAR+GQCFSSTYAT+ +  + V+    DV  N+YIFSDGIG ITPDLA 
Sbjct: 567  GRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLAL 626

Query: 609  EVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 668
            EVA++L+L  +PP AYQIR+AG KGV+A W   GDG RL LRPSM KF+S+H +LE+ SW
Sbjct: 627  EVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVSW 686

Query: 669  TRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGN 728
            T+FQPGFLNRQII LLS+LNVPD IFW MQETM+S L+ +++D DVAF+VLT SCA+ GN
Sbjct: 687  TKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDGN 746

Query: 729  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGG 788
             AA+MLSAGFEP+TEPHL+ ML+ IR+AQL  L EKARIFV  GRW MGC DE  VL+ G
Sbjct: 747  TAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQG 806

Query: 789  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 848
            QCFI+ + P L   F KHGS F  T  N  VI GTVVIAKNPCLHPGDVRILEAVD PEL
Sbjct: 807  QCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPEL 866

Query: 849  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 908
            HHL DCLVFPQ GERPH NEASGSDLDGDLYF+TWDE LIPP +KSW PM+Y   E K L
Sbjct: 867  HHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQL 926

Query: 909  TREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHA 968
             R+V                           S+ DI++FF KNMI+E+LG ICNAHVVHA
Sbjct: 927  PRQV---------------------------SQHDIIDFFLKNMISENLGRICNAHVVHA 986

Query: 969  DRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKI 1028
            D SEYGA+DE CI L+ELAATAVDFPKTGK+  MPPHLKPK+YPDFMGK+  QSYKS KI
Sbjct: 987  DLSEYGAMDEKCIHLAELAATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKI 1046

Query: 1029 LGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSG 1088
            LGR+YR I++A + D+++  +   TP D+ YD+DLEV GA+DF+A AW  KCSYD QLS 
Sbjct: 1047 LGRLYRSIQEASNGDVVS--QEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSA 1106

Query: 1089 LLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQ 1148
            LL QY+V  E E+VTGHI  + K SS+KQG++K++LK +YS L+KEF+  FE+I  +  +
Sbjct: 1107 LLSQYRVRTEAELVTGHITFLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCE 1166

Query: 1149 LTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKI 1208
            + DDE+N LYE KASAWYQV YHP W++KS  +  PD  E    LSF WI  DYLARIK+
Sbjct: 1167 IGDDEKNLLYEMKASAWYQVTYHPKWVEKSRGILGPDGEEIPASLSFAWIPVDYLARIKL 1218

Query: 1209 KCRKMKSFDPTKPINSLASYLSDRI 1224
            +C      +  KP+  LA+Y+S+RI
Sbjct: 1227 RCHGKVRVEGQKPVERLAAYISERI 1218

BLAST of CmoCh05G003850 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.9e-156
Identity = 348/1029 (33.82%), Postives = 540/1029 (52.48%), Query Frame = 0

Query: 193  DYKVEFLVRDINQIKRYT--DILCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLD---- 252
            DY++E    +I QI  ++        +++Q+  +P I+ +   +D   ++ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK---EDQPINLLFGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIK--LNNAMNYLKEQRVHQASLKRPPK 312
              D+ WIRTTDFT S  IG+   + + +P    +     N  NY  E R     ++    
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANY-AEHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNE 372
              +  +  V + D          + FE+LF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELV---------DIIEIRR 432
               A + H       + + C        WL    + W    +L           ++ + R
Sbjct: 323  YDRALIDHCLEKLFHLGECCYE---PAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYR 382

Query: 433  LVITPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKE 492
            + +TP++ Y   PEV +SNRVLR +    + FLRV+F+DE ++K+ S          +  
Sbjct: 383  VQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS----------MDL 442

Query: 493  ITSSSFPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSI 552
               SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW F+    +T   I
Sbjct: 443  SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHI 502

Query: 553  LRWMGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVE----RNDYIFSDGI 612
              WMG F + +NVAK AAR+GQ FSS+  T+ V  + +   +PDVE       Y+FSDGI
Sbjct: 503  RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI-EVIPDVEIISLGTRYVFSDGI 562

Query: 613  GTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSD 672
            G I+ + A++VA K  L    P A+QIRY G KGVVA  P+     +L+LR SM+KF+S+
Sbjct: 563  GKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESE 622

Query: 673  HRILEICSWTRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVL 732
            +  L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  +V +LD ++T    A + L
Sbjct: 623  NTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEAL 682

Query: 733  -TASCAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGC 792
               +  E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC
Sbjct: 683  GLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGC 742

Query: 793  FDESAVLQGGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVR 852
             DE+  L+ GQ  +Q S P+      + G  F        +I G VV+AKNPCLHPGDVR
Sbjct: 743  LDETRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVR 802

Query: 853  ILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPM 912
            +L+AV+ P L+H+ DC+VFPQ G RPH NE SGSDLDGD+YF+ WD+ L+PP  ++  PM
Sbjct: 803  VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPM 862

Query: 913  NYVAAEVKTLTREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLG 972
            +Y     + L  +VT                             ++ E+FA  ++N+SLG
Sbjct: 863  DYTPEPTQILDHDVT---------------------------IEEVEEYFANYIVNDSLG 922

Query: 973  TICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQ 1032
             I NAH   AD+    A  + CI+L++  +TAVDFPKTG    +P HL  K YPDFM K 
Sbjct: 923  IIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKP 982

Query: 1033 ATQSYKSTKILGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQ 1092
               +Y+S  ++G+++R +++     +I+            YD D+EV G  +++ EA+ Q
Sbjct: 983  DKPTYESKNVIGKLFREVKER-APPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQ 1042

Query: 1093 KCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQV 1152
            K +YD +L  L+  Y +  E EI++G I  M K  ++++    E +  +   L+KE   +
Sbjct: 1043 KANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD--AESIGRAVRALRKETLSL 1084

Query: 1153 FENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWI 1198
            F          +++E N     KASAWY V YH ++     E    D       LSF W 
Sbjct: 1103 F--------NASEEEENE--SAKASAWYHVTYHSSYWGLYNEGLNRD-----HFLSFAWC 1084

BLAST of CmoCh05G003850 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 3.0e-152
Identity = 364/1047 (34.77%), Postives = 531/1047 (50.72%), Query Frame = 0

Query: 194  YKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL-----DDD 253
            YK+E L  D+      T      ILLQL  +P I    +   +      D       D  
Sbjct: 155  YKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNSRFMDDRFHACKEDAK 214

Query: 254  DPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKRPPKILNEP 313
              W+R  DFT + + GRC+T          +KL  +       +    S       +N  
Sbjct: 215  FSWVRALDFTPNYSFGRCST--------LVLKLGKSALVSDILKSLPFSGNLGELTMNSM 274

Query: 314  DYGVQMTDHFFCIHYKEDIS--FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVSL 373
            D     ++    +H   D S  +E+LF +N++MH G I    +    F  L+  P +VS 
Sbjct: 275  DGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVSR 334

Query: 374  AALSHIHTYRHP-------VPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 433
                 +H            +      +K     LL N    +  ++L   ++  R+ ITP
Sbjct: 335  RIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEGEGERKL---MKCYRVNITP 394

Query: 434  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 493
            SK +CF PE E++N V++     A  F+RVTF+DE   K++S+  +  +     E    S
Sbjct: 395  SKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFFS 454

Query: 494  FPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 553
             P KT ++ R+  ILK GF +  + + FLA+S++QLR  S W F+    +    I RWMG
Sbjct: 455  KPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMG 514

Query: 554  RFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVE----RNDYIFSDGIGTITP 613
             F N ++V+KCAAR+GQ FSS+  T EV R  V   +PD+E     + YIFSDGIG I+ 
Sbjct: 515  HFENIRSVSKCAARMGQLFSSSRQTFEVLRWDV-EVIPDIEITTDGSKYIFSDGIGKISL 574

Query: 614  DLAQEVADKLKLGGSP-PCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRIL 673
              A+ VA  + L  +  P A+QIRY G KGV+A  P     I L+LRPSM KF+S+ R+L
Sbjct: 575  RFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPM--SSIDLSLRPSMKKFESESRML 634

Query: 674  EICSWTRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASC 733
             I SW++ QP ++NR+II+LLSTL + DEIF +MQ+  + + + M+T+ +VA  VL    
Sbjct: 635  NITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKLG 694

Query: 734  AEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESA 793
              +   A  ML  G+EP +EP+L  +L   +  +L  +R + +I V  GR  +GC DE+ 
Sbjct: 695  GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDETG 754

Query: 794  VLQGGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAV 853
            VL+ GQ +I+++    E+  S     +++     TV+ G V I KNPCLHPGD+R+LEA+
Sbjct: 755  VLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEAI 814

Query: 854  DAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAA 913
              P+L  + DCLVFPQ GERPH NE SG DLDGDLYFITWD+ LIP   K   PM+Y A 
Sbjct: 815  YDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTAT 874

Query: 914  EVKTLTREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNA 973
              + +   VT                             +I + F   MIN+SLG I  A
Sbjct: 875  RPRIMDHVVTL---------------------------EEIQKHFVDYMINDSLGAISTA 934

Query: 974  HVVHADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSY 1033
            H++HADRS   A    C++L+ L + AVDF KTG    MP  L+P+ YPDFM +     Y
Sbjct: 935  HLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMY 994

Query: 1034 KSTKILGRMYR----RIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQK 1093
             S  +LG++YR     +  + D   +++     +P    YD DLEV G+ +F+  A    
Sbjct: 995  ISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQPSP---TYDPDLEVPGSDEFLQAAEEYY 1054

Query: 1094 CSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKY---SSRKQGELKEKLKHSYSTLKKEFR 1153
              Y+ +L+ L+  Y+   E+EI+TG+I +   Y    +++  E+K+++  +   L +E R
Sbjct: 1055 ELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR 1114

Query: 1154 QVFENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFP 1210
                        L    +     R ASAWY+V YH            PD        SFP
Sbjct: 1115 ----------GWLLSSRKEEDASRMASAWYRVTYH------------PDRRRGKRFWSFP 1127

BLAST of CmoCh05G003850 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 525.0 bits (1351), Expect = 2.2e-147
Identity = 309/797 (38.77%), Postives = 443/797 (55.58%), Query Frame = 0

Query: 420  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 479
            S  Y + PE+ +SNRV+R F    + FLR++F+DE  +K+ +         +     S  
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRA-------TDLSPRSASGH 66

Query: 480  FPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 539
               +T ++ R+  +L  G  + G+ + FLA+SS+QLRD SAW F+  + +    I  WMG
Sbjct: 67   DANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMG 126

Query: 540  RFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVER-NDYIFSDGIGTITPDLA 599
             F N +NVAK AAR+GQ FSS+  T++V +  V  ++ D++    ++FSDGIG I+   A
Sbjct: 127  DFRNIRNVAKYAARLGQSFSSSTETLKVQKYEV-EEISDIKNGTQHVFSDGIGKISSAFA 186

Query: 600  QEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICS 659
             EVA K  L    P A+QIRY G KGVVA  P+     +L+LR SM KFQSD+  +++ +
Sbjct: 187  NEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPT--SRWKLSLRKSMLKFQSDNITVDVLA 246

Query: 660  WTRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVL-TASCAEQ 719
            ++++QPGFLNRQ+ITLLSTL V D +F   QE  V++L++M+TD   A + +      E 
Sbjct: 247  YSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEI 306

Query: 720  GNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ 779
             NA   +L  G++P  EP+L  +L   RA++L  L+ K+RI +  GR  MGC DE+  L+
Sbjct: 307  TNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLK 366

Query: 780  GGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAP 839
             GQ FI+ ++ +                N+   + G VVIAKNPCLHPGD+RIL AVD P
Sbjct: 367  YGQVFIRATSGV--------------NDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVP 426

Query: 840  ELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVK 899
             LHH+++C+VFPQ G RPH NE SGSDLDGD+YF++WD +LIPP  +   PM+Y  A  +
Sbjct: 427  VLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPTE 486

Query: 900  TLTREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVV 959
            TL  +VT                             ++ E+F   ++NESLG I NAHVV
Sbjct: 487  TLDHDVT---------------------------IEEVEEYFTNYIVNESLGMIANAHVV 546

Query: 960  HADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKST 1019
             AD+ +  A    CI+L++L + AVDFPKTG    +PP L  K YPDFM K    +Y+S 
Sbjct: 547  FADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFMEKLDKVTYESK 606

Query: 1020 KILGRMYRRIRDAYDEDMITACELNFT--PGDVYYDVDLEVAGAADFIAEAWNQKCSYDG 1079
             ++G++YR I+        T    +FT       YD D+ V G  D+I EA   K  YD 
Sbjct: 607  GVIGKLYREIKKH------TPHIKHFTREVARRSYDTDMIVDGYEDYITEAMALKDEYDF 666

Query: 1080 QLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGP 1139
            +L  L+  Y +  E EI++G I  M K  ++K     + ++ +  +L+KE R  F     
Sbjct: 667  KLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSD--ADAIRLAVRSLRKEARSRFS---- 726

Query: 1140 EFEQLTDDERNA--LYERKASAWYQVAYHPT-WLKKSMELREPDISEATPMLSFPWIAAD 1199
              E   DD  +     E KASAWY V YHP  W   +     P        +SFPW   +
Sbjct: 727  --EMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPH------FISFPWCIYE 730

Query: 1200 YLARIKIKCRKMKSFDP 1209
             L RIK + + ++   P
Sbjct: 787  KLLRIKQRRKFVRKMQP 730

BLAST of CmoCh05G003850 vs. ExPASy TrEMBL
Match: A0A6J1HBE9 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111462552 PE=3 SV=1)

HSP 1 Score: 2461.0 bits (6377), Expect = 0.0e+00
Identity = 1196/1223 (97.79%), Postives = 1196/1223 (97.79%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKSFDPTKPINSLASYLSDRI
Sbjct: 1201 RKMKSFDPTKPINSLASYLSDRI 1196

BLAST of CmoCh05G003850 vs. ExPASy TrEMBL
Match: A0A6J1K8Y0 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111491746 PE=3 SV=1)

HSP 1 Score: 2432.9 bits (6304), Expect = 0.0e+00
Identity = 1179/1223 (96.40%), Postives = 1188/1223 (97.14%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADV+KSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDI CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAALSHIHTYRHPVPDACKRLK VQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+FGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+HQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDE FWSMQETMVSKLDRMITDT+VAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRD YDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDVYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSY+TLKKEFRQVFENIGPEFEQLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQV YHPTWLKKSMELREPDI+EATPMLSFPW+A DYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVTYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKS DPTKPINSLASYLSDR+
Sbjct: 1201 RKMKSVDPTKPINSLASYLSDRM 1196

BLAST of CmoCh05G003850 vs. ExPASy TrEMBL
Match: A0A1S4DVP7 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103488305 PE=3 SV=1)

HSP 1 Score: 2276.1 bits (5897), Expect = 0.0e+00
Identity = 1093/1224 (89.30%), Postives = 1149/1224 (93.87%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+V+KSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  N +LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNK+TVLKCDYK+EF+VRDINQIKRYTD  CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YKEDISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH+YR PV DACK+LKLVQEWLLKNP LWKRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+F RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK+++VD IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GS PCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+SDHRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQ GQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYF TWDENLIPPS+KSWPPM Y  A+VKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            ++TRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  KITRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            S+YGALDENCI+LSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGK+ATQSYKSTKILG
Sbjct: 961  SKYGALDENCIQLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKEATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAY-DEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGL 1080
            +MYRRIRDAY D+DMIT+ ELNFTPGDV+YDVDLEVAGA DFIAEAWNQKCSYDGQLSGL
Sbjct: 1021 KMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGL 1080

Query: 1081 LGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQL 1140
            LGQYKV+REEEIVTGHIWSMPKY SRKQGELKEKLKHSYSTLKK+FRQVFENIGPEFEQL
Sbjct: 1081 LGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENIGPEFEQL 1140

Query: 1141 TDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIK 1200
            T DERNA YE+KASAWYQVAYHPTWLKKS+ELREPD  EA PMLSFPWIAADYLARIKIK
Sbjct: 1141 TCDERNAFYEKKASAWYQVAYHPTWLKKSLELREPDAPEAIPMLSFPWIAADYLARIKIK 1197

Query: 1201 CRKMKSFDPTKPINSLASYLSDRI 1224
            CR+MKSFDPTKPINSL SYLS+RI
Sbjct: 1201 CRRMKSFDPTKPINSLVSYLSERI 1197

BLAST of CmoCh05G003850 vs. ExPASy TrEMBL
Match: A0A5A7VD22 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002450 PE=3 SV=1)

HSP 1 Score: 2276.1 bits (5897), Expect = 0.0e+00
Identity = 1093/1224 (89.30%), Postives = 1149/1224 (93.87%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+V+KSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  N +LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNK+TVLKCDYK+EF+VRDINQIKRYTD  CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YKEDISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH+YR PV DACK+LKLVQEWLLKNP LWKRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+F RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK+++VD IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GS PCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+SDHRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQ GQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYF TWDENLIPPS+KSWPPM Y  A+VKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            ++TRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  KITRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            S+YGALDENCI+LSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGK+ATQSYKSTKILG
Sbjct: 961  SKYGALDENCIQLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKEATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAY-DEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGL 1080
            +MYRRIRDAY D+DMIT+ ELNFTPGDV+YDVDLEVAGA DFIAEAWNQKCSYDGQLSGL
Sbjct: 1021 KMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGL 1080

Query: 1081 LGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQL 1140
            LGQYKV+REEEIVTGHIWSMPKY SRKQGELKEKLKHSYSTLKK+FRQVFENIGPEFEQL
Sbjct: 1081 LGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENIGPEFEQL 1140

Query: 1141 TDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIK 1200
            T DERNA YE+KASAWYQVAYHPTWLKKS+ELREPD  EA PMLSFPWIAADYLARIKIK
Sbjct: 1141 TCDERNAFYEKKASAWYQVAYHPTWLKKSLELREPDAPEAIPMLSFPWIAADYLARIKIK 1197

Query: 1201 CRKMKSFDPTKPINSLASYLSDRI 1224
            CR+MKSFDPTKPINSL SYLS+RI
Sbjct: 1201 CRRMKSFDPTKPINSLVSYLSERI 1197

BLAST of CmoCh05G003850 vs. ExPASy TrEMBL
Match: E9NWL0 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G381730 PE=2 SV=1)

HSP 1 Score: 2256.1 bits (5845), Expect = 0.0e+00
Identity = 1083/1224 (88.48%), Postives = 1145/1224 (93.55%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVA+V+KSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD  CYVILLQLT+SPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LKLVQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+F RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQ GQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            ++TR         W                  DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  KITR---------W------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            S++GALDENCI+LSELAATAVDFPKTGK+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG
Sbjct: 961  SKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAY-DEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGL 1080
            +MYRRIRDAY D+DMIT+ ELNFTPGDV+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGL
Sbjct: 1021 KMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGL 1080

Query: 1081 LGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQL 1140
            LGQYKV+REEEIVTGHIWSMPKY SRKQGELKEKLKHSYSTLKK+FRQVFEN+GPEFEQL
Sbjct: 1081 LGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQL 1140

Query: 1141 TDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIK 1200
            T DERNALYE+KASAWYQVAYHPTWLKKS+ELREPD  EA PMLSFPWIAADYLARIKIK
Sbjct: 1141 TCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIK 1197

Query: 1201 CRKMKSFDPTKPINSLASYLSDRI 1224
            CR+ KSFDPTKPINSLASYLSDR+
Sbjct: 1201 CRRTKSFDPTKPINSLASYLSDRM 1197

BLAST of CmoCh05G003850 vs. NCBI nr
Match: XP_022961927.1 (RNA-dependent RNA polymerase 6 [Cucurbita moschata])

HSP 1 Score: 2461.0 bits (6377), Expect = 0.0e+00
Identity = 1196/1223 (97.79%), Postives = 1196/1223 (97.79%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKSFDPTKPINSLASYLSDRI
Sbjct: 1201 RKMKSFDPTKPINSLASYLSDRI 1196

BLAST of CmoCh05G003850 vs. NCBI nr
Match: KAG7029509.1 (RNA-dependent RNA polymerase 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2441.8 bits (6327), Expect = 0.0e+00
Identity = 1184/1223 (96.81%), Postives = 1190/1223 (97.30%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADV+KSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDI CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQ SLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQVSLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCIHYKEDI FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDIPFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAAL+HIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALTHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+FGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDE FWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPM+YVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMDYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRD YDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDVYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEF+QLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFDQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKSFDPTKPINSLASYLSDR+
Sbjct: 1201 RKMKSFDPTKPINSLASYLSDRM 1196

BLAST of CmoCh05G003850 vs. NCBI nr
Match: XP_023545955.1 (RNA-dependent RNA polymerase 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2440.2 bits (6323), Expect = 0.0e+00
Identity = 1184/1223 (96.81%), Postives = 1190/1223 (97.30%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADV+KSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTD+ CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDVSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAALSHIH YRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHMYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+FGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+HQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDE FWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPP+LKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPYLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRD YDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDVYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKSFDP KPINSLASYLSDR+
Sbjct: 1201 RKMKSFDPRKPINSLASYLSDRM 1196

BLAST of CmoCh05G003850 vs. NCBI nr
Match: XP_022996519.1 (RNA-dependent RNA polymerase 6 [Cucurbita maxima])

HSP 1 Score: 2432.9 bits (6304), Expect = 0.0e+00
Identity = 1179/1223 (96.40%), Postives = 1188/1223 (97.14%), Query Frame = 0

Query: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60
            MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120
            NVADV+KSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180
            QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240
            FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDI CYVILLQLTSSPCIWYRTADDDIAKSV
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420
            PNEVSLAALSHIHTYRHPVPDACKRLK VQEWLLKNPRLWKRSKELVDIIEIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540
            PQKTK+FGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+HQLPDVERNDYIFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660
            ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLNVPDE FWSMQETMVSKLDRMITDT+VAFDVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780
            AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900
            LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  EVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHADR 960
            EVTRL                           DIMEFFAKNMINESLGTICNAHVVHADR
Sbjct: 901  EVTRL---------------------------DIMEFFAKNMINESLGTICNAHVVHADR 960

Query: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020
            SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG
Sbjct: 961  SEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKILG 1020

Query: 1021 RMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080
            RMYRRIRD YDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL
Sbjct: 1021 RMYRRIRDVYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLL 1080

Query: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLT 1140
            GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSY+TLKKEFRQVFENIGPEFEQLT
Sbjct: 1081 GQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLT 1140

Query: 1141 DDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKIKC 1200
            DDERNALYERKASAWYQV YHPTWLKKSMELREPDI+EATPMLSFPW+A DYLARIKIKC
Sbjct: 1141 DDERNALYERKASAWYQVTYHPTWLKKSMELREPDIAEATPMLSFPWVAVDYLARIKIKC 1196

Query: 1201 RKMKSFDPTKPINSLASYLSDRI 1224
            RKMKS DPTKPINSLASYLSDR+
Sbjct: 1201 RKMKSVDPTKPINSLASYLSDRM 1196

BLAST of CmoCh05G003850 vs. NCBI nr
Match: KAG6598571.1 (RNA-dependent RNA polymerase 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2389.0 bits (6190), Expect = 0.0e+00
Identity = 1155/1195 (96.65%), Postives = 1162/1195 (97.24%), Query Frame = 0

Query: 29   MSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADVVKSDDYKKVVPHAFVHFALPDSA 88
            MSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADV+KSDDYKKVVPHAFVHFALPDSA
Sbjct: 1    MSYLESEIGLVDRCRLKTSWTPPESYPDFDIVNVADVIKSDDYKKVVPHAFVHFALPDSA 60

Query: 89   AGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRTKVPFKLSNVLVDIGNLTCQDGFS 148
            AGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRTKVPFKLSNVLVDIGNLTCQDGFS
Sbjct: 61   AGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRTKVPFKLSNVLVDIGNLTCQDGFS 120

Query: 149  VAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNNKHTVLKCDYKVEFLVRDINQIKR 208
            VAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNNKHTVLKCDYKVEFLVRDINQIKR
Sbjct: 121  VAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNNKHTVLKCDYKVEFLVRDINQIKR 180

Query: 209  YTDILCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLDDDDPWIRTTDFTISGAIGRCNT 268
            YTDI CYVILLQLTSSPCIWYRTADDDIAKSVPYDLLDD+DPWIRTTDFTISGAIGRCNT
Sbjct: 181  YTDISCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLDDNDPWIRTTDFTISGAIGRCNT 240

Query: 269  YRVSVPPRYGIKLNNAMNYLKEQRVHQASLKRPPKILNEPDYGVQMTDHFFCIHYKEDIS 328
            YRVSVPPRYGIKLNNAMNYLKEQRVHQ SLKRPPKILNEPDYGVQMTDHFFCIHYKEDI 
Sbjct: 241  YRVSVPPRYGIKLNNAMNYLKEQRVHQVSLKRPPKILNEPDYGVQMTDHFFCIHYKEDIP 300

Query: 329  FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVSLAALSHIHTYRHPVPDACKRLKL 388
            FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVSLAAL+HIHTYRHPVPDACKRLKL
Sbjct: 301  FELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNEVSLAALTHIHTYRHPVPDACKRLKL 360

Query: 389  VQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKAYCFPPEVELSNRVLRRFKDVADRFLR 448
            VQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKAYCFPPEVELSNRVLRRFKDVADRFLR
Sbjct: 361  VQEWLLKNPRLWKRSKELVDIIEIRRLVITPSKAYCFPPEVELSNRVLRRFKDVADRFLR 420

Query: 449  VTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKVFGRMKHILKHGFYLCGRKYSFL 508
            VTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTK+FGRMKHILKHGFYLCGRKYSFL
Sbjct: 421  VTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKIFGRMKHILKHGFYLCGRKYSFL 480

Query: 509  AYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFTNKNVAKCAARIGQCFSSTYATIEVPR 568
            AYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFTNKNVAKCAARIGQCFSSTYATIEVPR
Sbjct: 481  AYSSNQLRDQSAWFFSECKDVTVDSILRWMGRFTNKNVAKCAARIGQCFSSTYATIEVPR 540

Query: 569  NMVNHQLPDVERNDYIFSDGIGTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASW 628
            NMVNHQLPDVERNDYIFSDGIGTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASW
Sbjct: 541  NMVNHQLPDVERNDYIFSDGIGTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASW 600

Query: 629  PSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQPGFLNRQIITLLSTLNVPDEIFWSMQ 688
            PSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQPGFLNRQIITLLSTLNVPDE FWSMQ
Sbjct: 601  PSKGDGIRLALRPSMNKFQSDHRILEICSWTRFQPGFLNRQIITLLSTLNVPDENFWSMQ 660

Query: 689  ETMVSKLDRMITDTDVAFDVLTASCAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQL 748
            ETMVSKLDRMITDTDVAFDVLTASCAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQL
Sbjct: 661  ETMVSKLDRMITDTDVAFDVLTASCAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQL 720

Query: 749  WGLREKARIFVTDGRWCMGCFDESAVLQGGQCFIQVSTPLLERCFSKHGSLFDETKNNLT 808
            WGLREKARIFVTDGRWCMGCFDESAVLQ GQCFIQVSTPLLERCFSKHGSLFDETKNNLT
Sbjct: 721  WGLREKARIFVTDGRWCMGCFDESAVLQEGQCFIQVSTPLLERCFSKHGSLFDETKNNLT 780

Query: 809  VIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDL 868
            VIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDL
Sbjct: 781  VIRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDL 840

Query: 869  YFITWDENLIPPSRKSWPPMNYVAAEVKTLTREVTRLIHFICLTVWKECGLDVRSGLSRQ 928
            YFITWDENLIPPSRKSWPPM+YVAAEVKTLTREVTRL                       
Sbjct: 841  YFITWDENLIPPSRKSWPPMDYVAAEVKTLTREVTRL----------------------- 900

Query: 929  SSERDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGK 988
                DIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGK
Sbjct: 901  ----DIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGK 960

Query: 989  IVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDAYDEDMITACELNFTPGDVY 1048
            IVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRD YDEDMITACELNFTPGDVY
Sbjct: 961  IVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDEDMITACELNFTPGDVY 1020

Query: 1049 YDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQG 1108
            YDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQG
Sbjct: 1021 YDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQG 1080

Query: 1109 ELKEKLKHSYSTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLKKS 1168
            ELKEKLKHSYSTLKKEFRQVFENIGPEF+QLTDDERNALYERKASAWYQVAYHPTWLKKS
Sbjct: 1081 ELKEKLKHSYSTLKKEFRQVFENIGPEFDQLTDDERNALYERKASAWYQVAYHPTWLKKS 1140

Query: 1169 MELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDRI 1224
            MELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDR+
Sbjct: 1141 MELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDRM 1168

BLAST of CmoCh05G003850 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 1671.4 bits (4327), Expect = 0.0e+00
Identity = 800/1225 (65.31%), Postives = 972/1225 (79.35%), Query Frame = 0

Query: 1    MGSE-ESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDI 60
            MGSE   +K VVTQVSIGGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+F+I
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   VNVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHV 120
             + +++   D+YKKV PHAFVHFA+ +SA  A+ AAG+  L L+ + LKVSLGP++PY +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAF 180
            NQRRRT VP+KL+ + ++IG L  +D F V+WR  + G+DFLVDPFD TCKFCF + TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKS 240
            SFKD   H V+ CDYK+E LVRDI  +++Y  +  +V++LQL SSP +WYRTADDDI  +
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLK 300
            VP DLLDDDDPWIRTTDFT  GAIGRC++YRV + PRY  KL  A++Y + +RV +  ++
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCIH+KE ISFE++FLVN+V+H+G+ NQ Q+T+RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITP 420
            QP +V++A+L H+ TY+ PV DA KRLKLVQEW+ KNP+L    ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRR+K VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMG 540
            F QKT VF R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFF+E     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  RFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQE 600
            +F +KNVAKCAAR+G CFSSTYAT++V  + V+ ++PD+ERN Y+FSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKLG-GSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSW 660
            V +KLKL     PCAYQIRYAG KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAF+VLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+ +L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L V++G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTL 900
            HH+YDCL+FPQ G+RPHTNEASGSDLDGDLYF+ WD+ LIPP+RKS+P M+Y AAE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  TREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLGTICNAHVVHA 960
             R V                           + +DI++FFA+N+ NE LGTICNAHVVHA
Sbjct: 901  GRAV---------------------------NHQDIIDFFARNLANEQLGTICNAHVVHA 960

Query: 961  DRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQATQSYKSTKI 1020
            DRSEYGA+DE C+ L+ELAATAVDFPKTGKIV+MP HLKPKLYPDFMGK+  Q+YKS KI
Sbjct: 961  DRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKI 1020

Query: 1021 LGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQKCSYDGQLSG 1080
            LGR+YRR+++ YDED   + E +  P  + YD  LE+ G  D I EAW  KC YDGQL G
Sbjct: 1021 LGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIG 1080

Query: 1081 LLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQVFENIGPEFEQ 1140
            LLGQYKV +EEEIVTGHIWSMPKY+S+KQGELKE+LKHSY++LKKEFR+VFE   P+ E 
Sbjct: 1081 LLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHEN 1140

Query: 1141 LTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWIAADYLARIKI 1200
            L+++E+N LYE+KASAWY V YHP W+KKS+EL++PD S    MLSF WIAADYLARIKI
Sbjct: 1141 LSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIKI 1196

Query: 1201 KCRKMKSFDPTKPINSLASYLSDRI 1224
            + R+M S D  KP++SLA +L+ R+
Sbjct: 1201 RSREMGSIDSAKPVDSLAKFLAQRL 1196

BLAST of CmoCh05G003850 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 553.5 bits (1425), Expect = 4.2e-157
Identity = 348/1029 (33.82%), Postives = 540/1029 (52.48%), Query Frame = 0

Query: 193  DYKVEFLVRDINQIKRYT--DILCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLD---- 252
            DY++E    +I QI  ++        +++Q+  +P I+ +   +D   ++ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK---EDQPINLLFGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIK--LNNAMNYLKEQRVHQASLKRPPK 312
              D+ WIRTTDFT S  IG+   + + +P    +     N  NY  E R     ++    
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANY-AEHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQPNE 372
              +  +  V + D          + FE+LF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELV---------DIIEIRR 432
               A + H       + + C        WL    + W    +L           ++ + R
Sbjct: 323  YDRALIDHCLEKLFHLGECCYE---PAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYR 382

Query: 433  LVITPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKE 492
            + +TP++ Y   PEV +SNRVLR +    + FLRV+F+DE ++K+ S          +  
Sbjct: 383  VQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS----------MDL 442

Query: 493  ITSSSFPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSI 552
               SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW F+    +T   I
Sbjct: 443  SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHI 502

Query: 553  LRWMGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVE----RNDYIFSDGI 612
              WMG F + +NVAK AAR+GQ FSS+  T+ V  + +   +PDVE       Y+FSDGI
Sbjct: 503  RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI-EVIPDVEIISLGTRYVFSDGI 562

Query: 613  GTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSD 672
            G I+ + A++VA K  L    P A+QIRY G KGVVA  P+     +L+LR SM+KF+S+
Sbjct: 563  GKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESE 622

Query: 673  HRILEICSWTRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVL 732
            +  L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  +V +LD ++T    A + L
Sbjct: 623  NTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEAL 682

Query: 733  -TASCAEQGNAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGC 792
               +  E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC
Sbjct: 683  GLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGC 742

Query: 793  FDESAVLQGGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVR 852
             DE+  L+ GQ  +Q S P+      + G  F        +I G VV+AKNPCLHPGDVR
Sbjct: 743  LDETRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVR 802

Query: 853  ILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPM 912
            +L+AV+ P L+H+ DC+VFPQ G RPH NE SGSDLDGD+YF+ WD+ L+PP  ++  PM
Sbjct: 803  VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPM 862

Query: 913  NYVAAEVKTLTREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDIMEFFAKNMINESLG 972
            +Y     + L  +VT                             ++ E+FA  ++N+SLG
Sbjct: 863  DYTPEPTQILDHDVT---------------------------IEEVEEYFANYIVNDSLG 922

Query: 973  TICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKQ 1032
             I NAH   AD+    A  + CI+L++  +TAVDFPKTG    +P HL  K YPDFM K 
Sbjct: 923  IIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKP 982

Query: 1033 ATQSYKSTKILGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLEVAGAADFIAEAWNQ 1092
               +Y+S  ++G+++R +++     +I+            YD D+EV G  +++ EA+ Q
Sbjct: 983  DKPTYESKNVIGKLFREVKER-APPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQ 1042

Query: 1093 KCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRKQGELKEKLKHSYSTLKKEFRQV 1152
            K +YD +L  L+  Y +  E EI++G I  M K  ++++    E +  +   L+KE   +
Sbjct: 1043 KANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTKRRD--AESIGRAVRALRKETLSL 1084

Query: 1153 FENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLKKSMELREPDISEATPMLSFPWI 1198
            F          +++E N     KASAWY V YH ++     E    D       LSF W 
Sbjct: 1103 F--------NASEEEENE--SAKASAWYHVTYHSSYWGLYNEGLNRD-----HFLSFAWC 1084

BLAST of CmoCh05G003850 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 502.7 bits (1293), Expect = 8.5e-142
Identity = 334/996 (33.53%), Postives = 507/996 (50.90%), Query Frame = 0

Query: 246  DDDDPWIRTTDFTISGAIGRCNTYRVSV-PPRYGIKLNNAMNYLKEQRVHQ--------A 305
            D D  WIRTTDF+ S +IG    + + V      + + + + Y +E  +          A
Sbjct: 214  DFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFA 273

Query: 306  SLKRPPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTD-RFFD 365
            S  +   +LN    G+             +  +E+LF +NA++H   I+    +D     
Sbjct: 274  SAAQIVPLLNAAILGL-------------EFPYEILFQLNALVHAQKISLFAASDMELIK 333

Query: 366  LLRNQPNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPR-----LWKRSKELVDII 425
            +LR    E +L  L  +H       D    +K   + ++K  +      +KR  E  +I+
Sbjct: 334  ILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPASAYKRLTE-QNIM 393

Query: 426  EIRRLVITPSKAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYT----- 485
              +R  +TPSK Y   PE+E +N V++ F +    F+RVTF++E   K+ ++  +     
Sbjct: 394  SCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSKLPANALSVNSKE 453

Query: 486  -YYVAPIVKEITSSSFPQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFS 545
             Y+V            P +T ++ R+  IL  G  +  +++ FLA+S++QLR  S W F+
Sbjct: 454  GYFVK-----------PSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMFA 513

Query: 546  ECKDVTVDSILRWMGRFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERN-- 605
              + V  + I  WMG F   ++++KCAAR+GQ FS++  T+ V    V  Q+PD+E    
Sbjct: 514  SNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDV-EQIPDIEVTTD 573

Query: 606  --DYIFSDGIGTITPDLAQEVADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLAL 665
              DY FSDGIG I+   A++VA K  L    P A+QIRY G KGV+A    +    +L+L
Sbjct: 574  GADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIA--VDRSSFRKLSL 633

Query: 666  RPSMNKFQSDHRILEICSWTRFQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMI 725
            R SM KF S++R+L +  WT   P FLNR+II LLSTL + D +F +MQ   +S L  M+
Sbjct: 634  RDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNML 693

Query: 726  TDTDVAFDVLTASCAEQG-NAAAIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIF 785
             D D A +VL     E   N    ML  G+ P +EP+L  ML     +QL  L+ + RI 
Sbjct: 694  EDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRIL 753

Query: 786  VTDGRWCMGCFDESAVLQGGQCFIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAK 845
            V  GR  +GC DE  +L+ GQ +++V+    E   S+  S F +     +V+ G VV+ K
Sbjct: 754  VPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQSYFRKIDEETSVVIGKVVVTK 813

Query: 846  NPCLHPGDVRILEAVDAPELHH----LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWD 905
            NPCLHPGD+R+L+A+   E+H       DC++FPQ GERPH NE SG DLDGD +F++WD
Sbjct: 814  NPCLHPGDIRVLDAI--YEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWD 873

Query: 906  ENLIPPSRKSWPPMNYVAAEVKTLTREVTRLIHFICLTVWKECGLDVRSGLSRQSSERDI 965
            E +IP      PPM+Y  +  + +  +VT                             +I
Sbjct: 874  EKIIPSEMD--PPMDYAGSRPRLMDHDVTL---------------------------EEI 933

Query: 966  MEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTGKIVTMPP 1025
             +FF   MI+++LG I  AH+VHADR    A  + C++L+ L + AVDF KTG    MP 
Sbjct: 934  HKFFVDYMISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPY 993

Query: 1026 HLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDAYDEDMITACELNFTPGDVYYDVDLE 1085
             LKP+ +PDF+ +    +Y S  + G++YR ++ +  +    A     +   V YDV LE
Sbjct: 994  ALKPREFPDFLERFEKPTYISESVFGKLYRAVKSSLAQRKPEA----ESEDTVAYDVTLE 1053

Query: 1086 VAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKY---SSRKQGELK 1145
             AG   FI  A   +  Y  +L+ L+  Y  + EEEI+TG + +   Y    +R+ G++K
Sbjct: 1054 EAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMK 1113

Query: 1146 EKLKHSYSTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLKKSMEL 1205
            +++  S   L KE           FE+  +DE+    ++ ASAWY V Y+P         
Sbjct: 1114 DRITLSVKDLHKEAM-------GWFEKSCEDEQQK--KKLASAWYYVTYNPN-------- 1124

Query: 1206 REPDISEATPMLSFPWIAADYLARIKIKCRKMKSFD 1208
                  E    LSFPWI  D L  IK +  + +S +
Sbjct: 1174 ---HRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVE 1124

BLAST of CmoCh05G003850 vs. TAIR 10
Match: AT2G05370.1 (BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 171.8 bits (434), Expect = 3.4e-42
Identity = 106/289 (36.68%), Postives = 144/289 (49.83%), Query Frame = 0

Query: 7   EKIVVTQVSIGGFDSDVKAQDLMSYLESEIG-LVDRCRLKTSWTPPESYPDFDIVNVADV 66
           + +VV+QV+I GF    K ++L  YLE+++G LV RCRLKTSWTP  SYP+F+I++ +++
Sbjct: 2   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61

Query: 67  VKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVNQRRRT 126
            K D Y++VVPHAFVH    D+    + AA +++L L  + LK SL  E+PY +N     
Sbjct: 62  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 121

Query: 127 KVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFSFKDNN 186
             P+KL+ V ++IG                                              
Sbjct: 122 --PYKLTGVSLEIGT--------------------------------------------- 181

Query: 187 KHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSVPYDLL 246
                                              L SSP +WYRTADDDI ++   DLL
Sbjct: 182 -----------------------------------LASSPRVWYRTADDDIYETSAVDLL 200

Query: 247 DDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVH 295
           DD+DPWIRTTDFT SGAI RC  YRV + PR   K    ++YLK QRV+
Sbjct: 242 DDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNKWTKVLDYLKTQRVN 200

BLAST of CmoCh05G003850 vs. TAIR 10
Match: AT2G05370.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 3.5e-26
Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 0

Query: 1   MGSEESEK-IVVTQVSIGGFDSDVKAQDLMSYLESEIG-LVDRCRLKTSWTPPESYPDFD 60
           M SE + K +VV+QV+I GF    K ++L  YLE+++G LV RCRLKTSWTP  SYP+F+
Sbjct: 1   MESEGNMKNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFE 60

Query: 61  IVNVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYH 120
           I++ +++ K D Y++VVPHAFVH    D+    + AA +++L L  + LK SL  E+PY 
Sbjct: 61  IIDTSNIPKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYT 120

Query: 121 VNQRRRTKVPFKLSNVLVDIGNLTCQDGF 148
           +N       P+KL+ V ++IG ++  D F
Sbjct: 121 LN-------PYKLTGVSLEIGTVSQDDFF 139