CmoCh01G003290.1 (mRNA) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh01G003290.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	phytochrome A-associated F-box protein
Location	Cmo_Chr01: 1561248 .. 1567308 (+)
Sequence length	2097
RNA-Seq Expression	CmoCh01G003290.1
Synteny	CmoCh01G003290.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAATCAAGCCATCCCTTCTCTTGTTGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAACTCGCCGTCTGTTGTCCAGGCTTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGAATTGAGCTCGACTCATGACTCGAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCCAAAAGGAGGAAGATCTGTAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTATACATTTGTGATTGGCCTGGCTGTGTTCATATCGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCTTTTTGCTCGTGCAATGAGACTTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGGCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTACCCTTAACATAATCAAGCTCACTTCTGGTTTGTTCTCATTCAAATCCATAAGAACTATAGAAATCAATGGAGGGAATATGTTGGGAGGGAGACCAGGGAGTTCTTATGTCTATAATTTACATCATTCTATTGCTCAACTTTGATTCTTCTTTTTTTGCCTGTTTTTATGAGATTGGATATGAGCTTCCATTGAAAGGATTGCTGATGATTTCATCTCTCTGCTCTTTGTATTACTTTTAAGAGCTTTTCGAACTTTTCGTTTGCGAATATGACTACTAATTTTGTGGTACCCGTATCGAGATTTGTTTTGGTTTACGAGGTTTGAAGTTGATATCTCTTTTTTTAGCGTTTGTGAGCGTATGGACTATTTTTTTAGAACAAGTGATGAACCTTACATCATATTGTTTAGAGATAAGTCTCAAGGAAACAGATTTTATGTAAGTGTCTCATCAACGCGAGAAGGGGATGACATTTATCTTCTTCAACCTCACAATTGTAACGACACCCAAATCTACTTATCTTGTTTGATTTAGAGACAAGTCTTGTATCAAATGCGTATGCTTTAACGTTAATTGACCACTATGCCCTCCATTTATAAAGGAAGCATAGGATAAAGAGGACAAAGATTTGGGGAAGATTCTACCCTTGTGTAGTAGAGATCTTTGTTCGGCTATACACGAATGCAATAGAAATATAGTCATTCATAAATAAGTTTATTTTATAACGGGAATCAATAAATTTTCCGACCATAAATTTTAAATCTCAAATAATAAAACCCTAATATTTAATTTTGATAAAAAAAAAAATTCATGGGTTAAATTGTCAGGAATTTAAAAGCCCATCAACTAAATTATTAGATATTAAAATTGAGGGAAGAAATTGTCACTTTTTATTAAAGTTTTGGGGAAAAAAAAACAATGATTTAATTTTATTATTGTTTATGATTATTATATTTGGTTTGTTCAAATAACTTCAGGCTTTAAAACGGCGTCGTATTTGGGGTTATCAGCCCTAACAGTTGATCAATTGGAGCGAACTGGTTGCGCGCCTCCAACGGTTTGTTCAATGCCGCCATCGATTTCCACCTAAACCCTAAAACCCTTCTTCACCCCGCAATTTCTTATACTTAGATTCAGAAACTTGTTTTCAATTTTGCTCTGTTTCGTCGCACAGAAATTAGACTAAAAAAAATAATGGAATCCATTGACATGGACGTCGAGGAGCCCGTCAATGCCGATTCCAGTGTAGATTCAAGCTCCTTCAAGCGCTTCGGGCTCAAGAATGCCATTCAAACCAACTTCGGCGACGATTACGTCTTCCACATCGCTCCCAAGTAAGAAATTTCCAACTGGGTCTGTGTCGTTTCAACTTGTTTTTATTTTTGTCTCGGTAATCAAGGGTTTTGTTCTAACTTCTTTTTGAAGTGGGGATTGGACGCAAATGGCGGTGTCGTTATCTTCGAATGTTGTGAAGCTGTACTCGCCAGTGACTGGCCAGTACTATGGAGAGTGCAGAGGTCACATTGGAACAATCAATCAAATTTCCTTCGCAGTGCCATCAATCCCACATGTATTGCATTCTTGTTCTTCTGATGGAACTATCAGATCTTGGGACGTGCGGAATTTTCAGCAGGTTGGGTTTGTTTTGTCTAGTTTTTACCTTTTATTCATTGTTTTGGTTTGGGAGTTTGGGTTATGCTCTTGTTTGCTACAATTGCAGGTTTCATCCATTAGTGCTGGCCCTTCTCAAGAGATCTTCAGCTTTGCCTATGGAGGATCGAGTATGAATCTCCTTGCTGCAGGTTGTAAATCTCAGGTGGGCTTGATTTAGTAGAGACGTTAATTTCATTATAATTATGTTTTTTCTTCATATTTCTTGTTCTGCGGAGAGTGCTGGAAATCTGTTGTGAATTCATTTAGGTTAAATTATAAGAATGGTGCCAGAACTTTTGAAGTTATTCTCAGTTCCTAAATTTTTAAAAGTTGCTAATAGGATCATAAGCTTTGAATGTTATGCCTAATAAATCTCTTTTAACCTTTCATTTGTGTCTGTTTGATCATTGATCTAATAGTCAGTTTTTAAAGTTGAGGATTTCTTAGACACAATTTAAGGTTCATGAACCTATTCCACGTAAAGTTGAAGGCTTAAAGTTTTATTAACAAAATTCAAGGACCAAACTTGTAATTTAACCGTTCATTTAATATGAAAACTAAAAGTATGAGACGTTACAAACGACGAGTTTAGAGACATTAGTGAAAAGAACTCTTAAAGAATAATTGAACTTATTTGGTTATGTTGCTCAGATACTCTTCTGGGATTGGAGGAACAGAAAGCAAGTCGCGTGCTTGGAGGACTCTCATGTGGAAGATGTCACTCAGGTTCTTCCTGATGCTTGAGCAATGTATCTTGTATATAGTGATTATAATTTTGATTATACTTAGCTATTGCTTCAATTTTAAAAAGTAATCATGTGCCTGTTCAACTTAAGATAATATGTGATTGCAATGAAAATTGTTTAGACATCGGTATTTTTCTCAGATTCGGGCTTTTGTGCAGATGGTTTTTCCTTGAAATTGAAAATTGTTTCCTGTCCTCTTAAAAAGTAGGATGCATTTCTAACAACCACTAGCTTTTGAGAATCATATTCTTTCTAGGAAATAGTTTGATTGTTGAATTTGCATAGCAATGATGTGCAAAATCACTTTGCTTGTTAGCAATGATATTCAAGTTATCGACTACTGAAATAACGATCAATGCAAGTTATCGACTACTGAAATAACGATCAAGAGAAGGGTAGAGCTCTTAGAGGTTGCCATGATGGTGTGTCTAGCATTCCCTATTAGATATAAGTGAATAGCAGTCTCAAATAAATAATAACTAGAGATGTAACGGATGCTTTCGATTTTCTTTAGAAAAACATGTTGGAATATAAAAACTTCTGTACAAAAGCTATAGTGGTTATAGAAAAGAATTGAGAACTGCATGTTATGACAATTAGGGATTTGTTACTTCTGGGTTCTTCTGATATAATATTTTACAATTAGATATAGTTACAAGAAATCGTGGTCATTCAACTTGGCTTAAATCCACCGCTCTTTTGTAGTACTCTGTTTCCTGGGGATCCTTTTTGTTTGGTTGAATTCTGTTGGTGGTAGTATAACTCATGTTATCCAATTTTGCTCTTGTTAACAGGTTCACTTTATCCCTGGCCATCAAGCCAAGCTTGCTTCTGCTTCCGTGGATGGTTTGGTTTGTATATTTGACACTAATGGGGACATCGATGATGACGAACATATGGATTCTGTACGTAGCCACTATTATCTCAATGTTATTTGCATAGATACTTTCCTGATTGAGCTGATTTGCTTGAATAAATGTCTACTACTTTGTTGGGGTGCACGCAAGTTGGTCCGAACACTCGTGAATATAGAAAGAAAAAAAAAGCCTATTATTTTAGGTGCACATTCTTTGCTTGCAAATCTAGAATGCTATAGCATTATTGGAGTTCTTCATGGTGACTAATCCATTGGCCCATTTAATGACTCTATTTTAACGGGAAGAGTAAGCACGATTATATTTTATTGTTGTGAGATCCCACAGCAGTTGGAAAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGTTGACGCGTTTTAAAACCTTGAGGGGAAGTCCAGAAAGGAAAGTCCAAAAAGGACAAATATCTACTAGCAGTGGGCTTGGGCTATTACAATTGTACTTCCTTTATATAAATTTTAAGAATCGAATTTCTGTTTGACTAACCACTACTCTCCTACAAATCCTTGCAGTTCGGGTGACTGATTTGTTATTTTATTTTAACTTGAATTCTAAGTAAGAGATTTCTTAAGTGGGTTTTCAAGCTCAATTCTACAGATATTTTATTAGTGTGTTACCCTCATGATCATGCAGGTGATAAACGTTGGAACTTCAGTTGGTAAGATCGGATTCTTTGGAGAGAACTATAGAAAGTTGTGGTGCTTGACTCACATTGAAACCTTGAGGTACCAATCTTCTTTTCTACACACCATCAGTGCAACTAAGTAAAATGAATTGTAGCCATTTCTTCCCTCTGTGAGGATTTGCAATTCTTTCTTGATTGCAAAACTTTTAGGCCCTGTGATACTTGTGCGTTCTTGGTTGAATTTGCTTCTCATAGCTTTCATTTTCTTTCCCTTTCACAATTGAAAACTATATCTTCTGAGTTGCTTTTCTAGTTATCTAATGGTGAAGTTTTATGCAAATGGGCTATGGTAGCTTATGGGACTGGACGGATGGGAGAAATGAGGCAGATATCACAGATGCCCGCACACTAGCTTCCAACAGTTGGGCAATGGGTCGTGTGAGTTTTTCTATCTCGTCTCTCTTTTTCTTTTATCAATGAACTTGTGTCACCGGCACTTGACGACGATGACGTGTGAGGATTATAACGTATTTATTGGTTAAGTTACAAGTTTAGTCTCTGAACTTTTAGATTTATGTTTATATAGTCCTAGAACTTTGAAGGGTACCTAATAGGTTCTTAAACTTGTTGTTACCTTTCCCGGTTGAAAGAGAAACAAATAACTATTTCTGATGTCTTGAGATAATTACTTAGATCAGATTTTACTTGCTCTTTCAATTCAAAGAGTTCGATTATTGCTAGTCGGAGTGAATGGGTTCATGCAGTTCTTGAAAGTTTCACGATTGAAAATGCATACATATCATACCATGCTTCCTTGTTTGACAGGTTGATTATTTAGTTGATTGTCACTACTCGAGTGAAGGTGATAGATTATGGGTTCTTGGAGGTACCAACGATGGTACAGTAGGCTACTTCCCGGTCGACCATCACAAGGGGAAGAATGCGATTGAATCACCCGACGTTGTCCTTGAGGGTGGCCACATTGGCATCGTAAGAAGTGTCTTGCCCATGACAAACATATTGGGTGGATTTTCACGTAGCCAAGGTGTGTTTGGATGGACGGGCGGAGAAGATGGACGTTTATGTTGTTGGTCTTCAGACGATTCTTGCGAAACTAATCGATCTTGGATCTCGAGCACTCTAG

mRNA sequence

ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAATCAAGCCATCCCTTCTCTTGTTGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAACTCGCCGTCTGTTGTCCAGGCTTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGAATTGAGCTCGACTCATGACTCGAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCCAAAAGGAGGAAGATCTGTAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTATACATTTGTGATTGGCCTGGCTGTGTTCATATCGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCTTTTTGCTCGTGCAATGAGACTTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGCTTTAAAACGGCGTCGTATTTGGGGTTATCAGCCCTAACAGTTGATCAATTGGAGCGAACTGGTTGCGCGCCTCCAACGATTCAGAAACTTGTTTTCAATTTTGCTCTGTTTCGTCGCACAGAAATTAGACTAAAAAAAATAATGGAATCCATTGACATGGACGTCGAGGAGCCCGTCAATGCCGATTCCAGTGTAGATTCAAGCTCCTTCAAGCGCTTCGGGCTCAAGAATGCCATTCAAACCAACTTCGGCGACGATTACGTCTTCCACATCGCTCCCAATGGGGATTGGACGCAAATGGCGGTGTCGTTATCTTCGAATGTTGTGAAGCTGTACTCGCCAGTGACTGGCCAGTACTATGGAGAGTGCAGAGGTCACATTGGAACAATCAATCAAATTTCCTTCGCAGTGCCATCAATCCCACATGTATTGCATTCTTGTTCTTCTGATGGAACTATCAGATCTTGGGACGTGCGGAATTTTCAGCAGGTTTCATCCATTAGTGCTGGCCCTTCTCAAGAGATCTTCAGCTTTGCCTATGGAGGATCGAGTATGAATCTCCTTGCTGCAGGTTGTAAATCTCAGATACTCTTCTGGGATTGGAGGAACAGAAAGCAAGTCGCGTGCTTGGAGGACTCTCATGTGGAAGATGTCACTCAGGTTCACTTTATCCCTGGCCATCAAGCCAAGCTTGCTTCTGCTTCCGTGGATGGTTTGGTTTGTATATTTGACACTAATGGGGACATCGATGATGACGAACATATGGATTCTGTGATAAACGTTGGAACTTCAGTTGGTAAGATCGGATTCTTTGGAGAGAACTATAGAAAGTTGTGGTGCTTGACTCACATTGAAACCTTGAGCTTATGGGACTGGACGGATGGGAGAAATGAGGCAGATATCACAGATGCCCGCACACTAGCTTCCAACAGTTGGGCAATGGGTCGTGTTGATTATTTAGTTGATTGTCACTACTCGAGTGAAGGTGATAGATTATGGGTTCTTGGAGGTACCAACGATGGTACAGTAGGCTACTTCCCGGTCGACCATCACAAGGGGAAGAATGCGATTGAATCACCCGACGTTGTCCTTGAGGGTGGCCACATTGGCATCACGATTCTTGCGAAACTAATCGATCTTGGATCTCGAGCACTCTAG

Coding sequence (CDS)

ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAATCAAGCCATCCCTTCTCTTGTTGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAACTCGCCGTCTGTTGTCCAGGCTTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGAATTGAGCTCGACTCATGACTCGAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCCAAAAGGAGGAAGATCTGTAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAGCAGGGAACAAGGAAATAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTATACATTTGTGATTGGCCTGGCTGTGTTCATATCGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCTTTTTGCTCGTGCAATGAGACTTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGTTTTTGGGTACCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGCTTTAAAACGGCGTCGTATTTGGGGTTATCAGCCCTAACAGTTGATCAATTGGAGCGAACTGGTTGCGCGCCTCCAACGATTCAGAAACTTGTTTTCAATTTTGCTCTGTTTCGTCGCACAGAAATTAGACTAAAAAAAATAATGGAATCCATTGACATGGACGTCGAGGAGCCCGTCAATGCCGATTCCAGTGTAGATTCAAGCTCCTTCAAGCGCTTCGGGCTCAAGAATGCCATTCAAACCAACTTCGGCGACGATTACGTCTTCCACATCGCTCCCAATGGGGATTGGACGCAAATGGCGGTGTCGTTATCTTCGAATGTTGTGAAGCTGTACTCGCCAGTGACTGGCCAGTACTATGGAGAGTGCAGAGGTCACATTGGAACAATCAATCAAATTTCCTTCGCAGTGCCATCAATCCCACATGTATTGCATTCTTGTTCTTCTGATGGAACTATCAGATCTTGGGACGTGCGGAATTTTCAGCAGGTTTCATCCATTAGTGCTGGCCCTTCTCAAGAGATCTTCAGCTTTGCCTATGGAGGATCGAGTATGAATCTCCTTGCTGCAGGTTGTAAATCTCAGATACTCTTCTGGGATTGGAGGAACAGAAAGCAAGTCGCGTGCTTGGAGGACTCTCATGTGGAAGATGTCACTCAGGTTCACTTTATCCCTGGCCATCAAGCCAAGCTTGCTTCTGCTTCCGTGGATGGTTTGGTTTGTATATTTGACACTAATGGGGACATCGATGATGACGAACATATGGATTCTGTGATAAACGTTGGAACTTCAGTTGGTAAGATCGGATTCTTTGGAGAGAACTATAGAAAGTTGTGGTGCTTGACTCACATTGAAACCTTGAGCTTATGGGACTGGACGGATGGGAGAAATGAGGCAGATATCACAGATGCCCGCACACTAGCTTCCAACAGTTGGGCAATGGGTCGTGTTGATTATTTAGTTGATTGTCACTACTCGAGTGAAGGTGATAGATTATGGGTTCTTGGAGGTACCAACGATGGTACAGTAGGCTACTTCCCGGTCGACCATCACAAGGGGAAGAATGCGATTGAATCACCCGACGTTGTCCTTGAGGGTGGCCACATTGGCATCACGATTCTTGCGAAACTAATCGATCTTGGATCTCGAGCACTCTAG

Protein sequence

MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVADLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSKHESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKGVFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGYHDDGEPVVRAYVCFKTASYLGLSALTVDQLERTGCAPPTIQKLVFNFALFRRTEIRLKKIMESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETLSLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFPVDHHKGKNAIESPDVVLEGGHIGITILAKLIDLGSRAL

Homology

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot
Match: Q944S2 (WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 3.8e-123
Identity = 205/330 (62.12%), Postives = 258/330 (78.18%), Query Frame = 0


Query: 357 LKKIMESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVS 416
           ++++   ++++V+    +DSS  + + K+FGLKN+IQTNFG DYVF I P  DWT +AVS
Sbjct: 1   MEEVSSEMEVEVQNRQLSDSS-PAQNVKKFGLKNSIQTNFGSDYVFQIVPKIDWTAIAVS 60

Query: 417 LSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSI--PHVLHSCSSDGTIRSWDVRNF 476
           LS+N VKLYSPVTGQYYGEC+GH  T+NQI+F+  S   PHVLHSCSSDGTIRSWD R+F
Sbjct: 61  LSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSF 120

Query: 477 QQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQV 536
           QQVS I  G  QEIFSF+YGG++ NLLA GCK Q+L WDWRN KQVACLE+SH++DVTQV
Sbjct: 121 QQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQV 180

Query: 537 HFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCL 596
           HF+P    KL SASVDGL+C+F+T GDI+DD+H++SVINVGTS+GKIGF G+ Y+KLWCL
Sbjct: 181 HFVPNKPNKLLSASVDGLICLFNTEGDINDDDHLESVINVGTSIGKIGFLGDGYKKLWCL 240

Query: 597 THIETLSLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDG 656
           THIETLS+W+W DG  E ++  AR LAS+SW    VDY VDCH    G+ LWV+GGT  G
Sbjct: 241 THIETLSIWNWEDGSCEVNLEKARELASDSWTQDNVDYFVDCHCPG-GEDLWVIGGTCAG 300

Query: 657 TVGYFPVDHHKGKNAIESPDVVLEGGHIGI 685
           TVGYFPV ++K   +I + + +L GGHI +
Sbjct: 301 TVGYFPV-NYKQPGSIGTAEAILGGGHIDV 327

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 394.4 bits (1012), Expect = 2.6e-108
Identity = 193/330 (58.48%), Postives = 231/330 (70.00%), Query Frame = 0


Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60
           MAES+FS +P+D++ NIFFKL+D+P  WARLACV T+FSS +RN+C K +C  AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLEREL 120
           DL+                DS   PPGGWASL KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDEKYLELSSTHDSKHESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSES 180
           GPD+      +T D     E  +  +        S   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNLDPKPTTTDLALNDEEVSKPV-------GSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVLDPQIGGTKVEKGVFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQF 240
             + D +    ++E        +    KRRKICRS+GSHLASG WNLSREQGNKLL S+F
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKID-LKCAFCSCN 300
           RGDCLYIC+WPGC+H+EEKRNYMLFRG FK+FK S VWRTI DGNR+K   LKCAFC C+
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSGFCLRRVFGYHDDGEPVVRAYVC 314
           ETWDLHS FCLRRVFG+HDDGEPVVRAYVC
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYVC 320

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot
Match: Q54QU5 (WD repeat-containing protein 89 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr89 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.7e-33
Identity = 88/268 (32.84%), Postives = 138/268 (51.49%), Query Frame = 0


Query: 395 NFGDDYVFHIAPNGDWTQMAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIP 454
           + GDD  + +  +     +A + S+ ++K+Y            GH   IN+  F   +  
Sbjct: 22  SIGDDTCYVLDLSVTPNLLAAAGSNYLIKIYDRSNNTILNVLSGHKDAINETKFIENT-- 81

Query: 455 HVLHSCSSDGTIRSWDVRNFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDW 514
           + L SCSSD T++ WD +  Q   +I+     EIFS    G   ++LA G  S ++ ++ 
Sbjct: 82  NTLLSCSSDKTVKIWDTKTGQCSQTIN--QQGEIFSIDLNG---DILAMGVGSMVVLYNL 141

Query: 515 RNRKQVACLEDSHVEDVTQVHFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINV 574
             +K +   + SH EDVT+V F P  + KL S SVDGL+C++D     DDD+ +  VIN 
Sbjct: 142 STKKMIRKFDCSHTEDVTRVRFHPIDKNKLVSCSVDGLICMYDLE-QADDDDAIVHVINA 201

Query: 575 GTSVGKIGFFGENYRKLWCLTHIETLSLWDWTDGRNEADI-TDARTLASNSWAMGRVDYL 634
             S+G IGFFG  Y+ L+ L+H E L+ WD T G        D R+  S+ +    ++Y 
Sbjct: 202 EDSIGNIGFFGSAYQYLYTLSHTERLATWDLTTGLKIKHYGADLRSTLSDRYKF-EINYF 261

Query: 635 VDCHYSSEGDRLWVLGGTNDGTVGYFPV 662
           + C Y +  ++L + GG  +GT   F V
Sbjct: 262 ISCIYDNASNQLILFGGDFNGTGHVFLV 280

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot
Match: Q9D0R9 (WD repeat-containing protein 89 OS=Mus musculus OX=10090 GN=Wdr89 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 7.3e-26
Identity = 79/263 (30.04%), Postives = 131/263 (49.81%), Query Frame = 0


Query: 413 MAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVR 472
           +AV  S+  +++Y   T     E  G  G ++ +SFA  +    ++S S+DGT++ WD R
Sbjct: 43  VAVLCSNGSIRIYDKETLHLLREFGGSPGLLSGVSFA--NSCDSVYSASTDGTVKCWDAR 102

Query: 473 NFQQ--VSSISAGPSQEIFSFAYGGSSMNLLAAGCK-----SQILFWDWR-------NRK 532
              +  V      PS    SF       +++ AG +     + ++FWD R        R 
Sbjct: 103 GASEKPVQLFKGYPSCSFISFDVNCKD-HVICAGAEKVDEDALLVFWDARFTSQDLSTRD 162

Query: 533 QVACLEDSHVEDVTQVHFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSV 592
            +    ++H +D+TQV F P +   + S S DGLV +FD + D ++D  + +  N  +SV
Sbjct: 163 PLGAYSETHSDDITQVRFHPSNPNLVVSGSTDGLVNVFDLSADKEEDA-LVATCNSVSSV 222

Query: 593 GKIGFFGENYRKLWCLTHIETLSLWDWTDGRNEADIT-----DARTLASNSWAMGRVDYL 652
             IG+ G++Y++++C+TH E    WD      +  IT     D R +       G +DYL
Sbjct: 223 SCIGWCGKDYKQIYCMTHDEGFCWWDLNHLDTDEPITCLNIQDVREITDVK--DGHLDYL 282

Query: 653 VDCHYSSEGDRLWVLGGTNDGTV 657
           +   Y  + DRL+V+GGTN G +
Sbjct: 283 IGGLYHEKMDRLFVIGGTNTGKI 299

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot
Match: Q5FVP5 (WD repeat-containing protein 89 OS=Rattus norvegicus OX=10116 GN=Wdr89 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-24
Identity = 79/262 (30.15%), Postives = 130/262 (49.62%), Query Frame = 0


Query: 413 MAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVR 472
           +AV  S+  +++Y   T     E  G  G +N + FA  S  +V +S S+DGT++ WD R
Sbjct: 43  VAVLCSNGSIRIYDKETLNLLREFSGSPGLLNGVRFA-NSCDNV-YSASTDGTVKCWDAR 102

Query: 473 -NFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCK-----SQILFWDWR-------NRKQ 532
              ++ + +  G    IF         +++ AG +     + ++FWD R        R  
Sbjct: 103 LASEKPAQLFKGYPSNIFISFDVNCKDHIICAGAEKVEDDALLVFWDARFTSQDLSTRDP 162

Query: 533 VACLEDSHVEDVTQVHFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVG 592
           +    ++H +D+TQV F P +   + S S DGLV +FD + D ++D  + +  N  +SV 
Sbjct: 163 LGAYSETHSDDITQVRFHPSNPNMVVSGSTDGLVNVFDLSVDNEEDA-LVATCNSVSSVS 222

Query: 593 KIGFFGENYRKLWCLTHIETLSLWDWTDGRNEADIT-----DARTLASNSWAMGRVDYLV 652
            IG+ G +Y++++C+TH E    WD      +  IT     D R +       G +DYL+
Sbjct: 223 CIGWCGRDYKQIYCMTHDEGFCWWDLNHLDTDEPITCLNIQDVRDVTDVK--EGHLDYLI 282

Query: 653 DCHYSSEGDRLWVLGGTNDGTV 657
              Y    DRL+V+GGTN G +
Sbjct: 283 GGLYHENMDRLFVIGGTNLGKI 299

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL
Match: A0A6J1GAT4 (WD repeat-containing protein 89 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452333 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 4.7e-193
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 480
           VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 120

Query: 481 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 540
           SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH
Sbjct: 121 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 180

Query: 541 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 600
           QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL
Sbjct: 181 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 240

Query: 601 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 660
           SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP
Sbjct: 241 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 300

Query: 661 VDHHKGKNAIESPDVVLEGGHIGI 685
           VDHHKGKNAIESPDVVLEGGHIGI
Sbjct: 301 VDHHKGKNAIESPDVVLEGGHIGI 324

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL
Match: A0A6J1KH06 (WD repeat-containing protein 89 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493136 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 3.5e-188
Identity = 317/325 (97.54%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWT MAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTSMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPS-IPHVLHSCSSDGTIRSWDVRNFQQVSS 480
           VVKLYSPVTGQYYGECRGHIGTINQISF++PS  PHVLHSCSSDGTIRSWDVRNFQQVSS
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFSMPSTTPHVLHSCSSDGTIRSWDVRNFQQVSS 120

Query: 481 ISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG 540
           ISAGPSQEIFSFAYGGSS+NLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG
Sbjct: 121 ISAGPSQEIFSFAYGGSSVNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG 180

Query: 541 HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET 600
           HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET
Sbjct: 181 HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET 240

Query: 601 LSLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYF 660
           LSLWDWTDGRNEADIT+ARTLASNSWAMG VDYLVDCHYSSEGDRLWVLGGTNDGTVGYF
Sbjct: 241 LSLWDWTDGRNEADITNARTLASNSWAMGHVDYLVDCHYSSEGDRLWVLGGTNDGTVGYF 300

Query: 661 PVDHHKGKNAIESPDVVLEGGHIGI 685
           PVDHHKGKNAIESPDVVLEGGHIGI
Sbjct: 301 PVDHHKGKNAIESPDVVLEGGHIGI 325

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL
Match: A0A6J1GA36 (phytochrome A-associated F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111452334 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 2.9e-187
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60
           MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA
Sbjct: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60

Query: 61  DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK 120
           DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK
Sbjct: 61  DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK 120

Query: 121 HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180
           HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG
Sbjct: 121 HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180

Query: 181 VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI 240
           VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI
Sbjct: 181 VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI 240

Query: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY 300
           EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY
Sbjct: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY 300

Query: 301 HDDGEPVVRAYVC 314
           HDDGEPVVRAYVC
Sbjct: 301 HDDGEPVVRAYVC 313

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL
Match: A0A6J1KCS4 (phytochrome A-associated F-box protein-like OS=Cucurbita maxima OX=3661 GN=LOC111493138 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 1.2e-180
Identity = 304/313 (97.12%), Postives = 307/313 (98.08%), Query Frame = 0


Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60
           MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPS+VA
Sbjct: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60

Query: 61  DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK 120
           DLVVGDSVPPGGWASLLKLA+CCPGLHHSGVLLENSDFGLERELGPDEKYL LSSTHDSK
Sbjct: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120

Query: 121 HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180
           HESESSTAQIEVNSDL  SASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG
Sbjct: 121 HESESSTAQIEVNSDL--SASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180

Query: 181 VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI 240
           VFVSDGEFCASKRRKI RSMGSHLASGVWNL+REQG KLLRSQFRGDCLYICDWPGCVHI
Sbjct: 181 VFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCVHI 240

Query: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY 300
           EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRR FGY
Sbjct: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGFGY 300

Query: 301 HDDGEPVVRAYVC 314
           HDDGEPVVRAYVC
Sbjct: 301 HDDGEPVVRAYVC 311

[Close]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL
Match: A0A6J1CNT7 (WD repeat-containing protein 89 homolog OS=Momordica charantia OX=3673 GN=LOC111013315 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 5.5e-178
Identity = 295/324 (91.05%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           ME+IDMDVEE  NAD+S +SSSFKRFGLKN+IQTNFGDDYVFHIAP+ DWT MAVSLSSN
Sbjct: 1   MEAIDMDVEEHANADTSTNSSSFKRFGLKNSIQTNFGDDYVFHIAPSEDWTSMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 480
           VVKLYSPVTGQYYGECRGH GTINQISF+VPS PHVLHSCSSDGTIRSWDVR   ++SSI
Sbjct: 61  VVKLYSPVTGQYYGECRGHSGTINQISFSVPSTPHVLHSCSSDGTIRSWDVRALNEISSI 120

Query: 481 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 540
           SAGPSQEIFSFAYGGSS NLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH
Sbjct: 121 SAGPSQEIFSFAYGGSSTNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 180

Query: 541 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 600
           Q KLASASVDGLVCIFDTNGDIDDD+HMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL
Sbjct: 181 QGKLASASVDGLVCIFDTNGDIDDDDHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 240

Query: 601 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 660
           SLWDW+DGRNEADITDARTLASNSW M  VDYLVDCHYS+EGDRLWVLGGTNDGTVGYFP
Sbjct: 241 SLWDWSDGRNEADITDARTLASNSWKMDHVDYLVDCHYSNEGDRLWVLGGTNDGTVGYFP 300

Query: 661 VDHHKGKNAIESPDVVLEGGHIGI 685
           VDHHKGKNAIESP+VVLEGGH+G+
Sbjct: 301 VDHHKGKNAIESPNVVLEGGHVGV 324

[Close]

BLAST of CmoCh01G003290.1 vs. NCBI nr
Match: XP_022948760.1 (WD repeat-containing protein 89 homolog [Cucurbita moschata])

HSP 1 Score: 684.5 bits (1765), Expect = 9.7e-193
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 480
           VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 120

Query: 481 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 540
           SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH
Sbjct: 121 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 180

Query: 541 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 600
           QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL
Sbjct: 181 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 240

Query: 601 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 660
           SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP
Sbjct: 241 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 300

Query: 661 VDHHKGKNAIESPDVVLEGGHIGI 685
           VDHHKGKNAIESPDVVLEGGHIGI
Sbjct: 301 VDHHKGKNAIESPDVVLEGGHIGI 324

[Close]

BLAST of CmoCh01G003290.1 vs. NCBI nr
Match: KAG6606965.1 (WD repeat-containing protein GTS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036668.1 WD repeat-containing protein 89-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 676.8 bits (1745), Expect = 2.0e-190
Identity = 320/324 (98.77%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 480
           VVKLYSPVTGQYYGECRGHIGTINQISFAVPS PHVLHSCSSDGTIRSWDVRNFQQVSSI
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFAVPSTPHVLHSCSSDGTIRSWDVRNFQQVSSI 120

Query: 481 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 540
           SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH
Sbjct: 121 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 180

Query: 541 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 600
           QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGE YRKLWCLTHIETL
Sbjct: 181 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGEKYRKLWCLTHIETL 240

Query: 601 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 660
           SLWDWTDGRNEADITDARTLASNSW MG VDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP
Sbjct: 241 SLWDWTDGRNEADITDARTLASNSWTMGHVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 300

Query: 661 VDHHKGKNAIESPDVVLEGGHIGI 685
           VDHHKGKNAIESPDVVLEGGHIGI
Sbjct: 301 VDHHKGKNAIESPDVVLEGGHIGI 324

[Close]

BLAST of CmoCh01G003290.1 vs. NCBI nr
Match: XP_023522094.1 (WD repeat-containing protein 89 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 674.9 bits (1740), Expect = 7.7e-190
Identity = 319/324 (98.46%), Postives = 319/324 (98.46%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWT MAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTSMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVRNFQQVSSI 480
           VVKLYSPVTGQYYGECRGHIGTINQISFAVPS PHVLHSCSSDGTIRSWDVRNFQQVSSI
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFAVPSTPHVLHSCSSDGTIRSWDVRNFQQVSSI 120

Query: 481 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 540
           SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH
Sbjct: 121 SAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPGH 180

Query: 541 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 600
           QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL
Sbjct: 181 QAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIETL 240

Query: 601 SLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 660
           SLWDWTDGRNEADITDARTLASNSW MG VDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP
Sbjct: 241 SLWDWTDGRNEADITDARTLASNSWTMGHVDYLVDCHYSSEGDRLWVLGGTNDGTVGYFP 300

Query: 661 VDHHKGKNAIESPDVVLEGGHIGI 685
           VDHHKGK AIESPDVVLEGGHIGI
Sbjct: 301 VDHHKGKTAIESPDVVLEGGHIGI 324

[Close]

BLAST of CmoCh01G003290.1 vs. NCBI nr
Match: XP_022998528.1 (WD repeat-containing protein 89 homolog [Cucurbita maxima])

HSP 1 Score: 668.3 bits (1723), Expect = 7.2e-188
Identity = 317/325 (97.54%), Postives = 321/325 (98.77%), Query Frame = 0


Query: 361 MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVSLSSN 420
           MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWT MAVSLSSN
Sbjct: 1   MESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTSMAVSLSSN 60

Query: 421 VVKLYSPVTGQYYGECRGHIGTINQISFAVPS-IPHVLHSCSSDGTIRSWDVRNFQQVSS 480
           VVKLYSPVTGQYYGECRGHIGTINQISF++PS  PHVLHSCSSDGTIRSWDVRNFQQVSS
Sbjct: 61  VVKLYSPVTGQYYGECRGHIGTINQISFSMPSTTPHVLHSCSSDGTIRSWDVRNFQQVSS 120

Query: 481 ISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG 540
           ISAGPSQEIFSFAYGGSS+NLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG
Sbjct: 121 ISAGPSQEIFSFAYGGSSVNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQVHFIPG 180

Query: 541 HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET 600
           HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET
Sbjct: 181 HQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCLTHIET 240

Query: 601 LSLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDGTVGYF 660
           LSLWDWTDGRNEADIT+ARTLASNSWAMG VDYLVDCHYSSEGDRLWVLGGTNDGTVGYF
Sbjct: 241 LSLWDWTDGRNEADITNARTLASNSWAMGHVDYLVDCHYSSEGDRLWVLGGTNDGTVGYF 300

Query: 661 PVDHHKGKNAIESPDVVLEGGHIGI 685
           PVDHHKGKNAIESPDVVLEGGHIGI
Sbjct: 301 PVDHHKGKNAIESPDVVLEGGHIGI 325

[Close]

BLAST of CmoCh01G003290.1 vs. NCBI nr
Match: XP_022948761.1 (phytochrome A-associated F-box protein [Cucurbita moschata])

HSP 1 Score: 665.2 bits (1715), Expect = 6.1e-187
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60
           MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA
Sbjct: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60

Query: 61  DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK 120
           DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK
Sbjct: 61  DLVVGDSVPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLERELGPDEKYLELSSTHDSK 120

Query: 121 HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180
           HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG
Sbjct: 121 HESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKG 180

Query: 181 VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI 240
           VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI
Sbjct: 181 VFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQFRGDCLYICDWPGCVHI 240

Query: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY 300
           EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY
Sbjct: 241 EEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRVFGY 300

Query: 301 HDDGEPVVRAYVC 314
           HDDGEPVVRAYVC
Sbjct: 301 HDDGEPVVRAYVC 313

[Close]

BLAST of CmoCh01G003290.1 vs. TAIR 10
Match: AT2G47790.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-124
Identity = 205/330 (62.12%), Postives = 258/330 (78.18%), Query Frame = 0


Query: 357 LKKIMESIDMDVEEPVNADSSVDSSSFKRFGLKNAIQTNFGDDYVFHIAPNGDWTQMAVS 416
           ++++   ++++V+    +DSS  + + K+FGLKN+IQTNFG DYVF I P  DWT +AVS
Sbjct: 1   MEEVSSEMEVEVQNRQLSDSS-PAQNVKKFGLKNSIQTNFGSDYVFQIVPKIDWTAIAVS 60

Query: 417 LSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSI--PHVLHSCSSDGTIRSWDVRNF 476
           LS+N VKLYSPVTGQYYGEC+GH  T+NQI+F+  S   PHVLHSCSSDGTIRSWD R+F
Sbjct: 61  LSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSF 120

Query: 477 QQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRKQVACLEDSHVEDVTQV 536
           QQVS I  G  QEIFSF+YGG++ NLLA GCK Q+L WDWRN KQVACLE+SH++DVTQV
Sbjct: 121 QQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQV 180

Query: 537 HFIPGHQAKLASASVDGLVCIFDTNGDIDDDEHMDSVINVGTSVGKIGFFGENYRKLWCL 596
           HF+P    KL SASVDGL+C+F+T GDI+DD+H++SVINVGTS+GKIGF G+ Y+KLWCL
Sbjct: 181 HFVPNKPNKLLSASVDGLICLFNTEGDINDDDHLESVINVGTSIGKIGFLGDGYKKLWCL 240

Query: 597 THIETLSLWDWTDGRNEADITDARTLASNSWAMGRVDYLVDCHYSSEGDRLWVLGGTNDG 656
           THIETLS+W+W DG  E ++  AR LAS+SW    VDY VDCH    G+ LWV+GGT  G
Sbjct: 241 THIETLSIWNWEDGSCEVNLEKARELASDSWTQDNVDYFVDCHCPG-GEDLWVIGGTCAG 300

Query: 657 TVGYFPVDHHKGKNAIESPDVVLEGGHIGI 685
           TVGYFPV ++K   +I + + +L GGHI +
Sbjct: 301 TVGYFPV-NYKQPGSIGTAEAILGGGHIDV 327

[Close]

BLAST of CmoCh01G003290.1 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 394.4 bits (1012), Expect = 1.9e-109
Identity = 193/330 (58.48%), Postives = 231/330 (70.00%), Query Frame = 0


Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSLVA 60
           MAES+FS +P+D++ NIFFKL+D+P  WARLACV T+FSS +RN+C K +C  AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPPGGWASLLKLAVCCPGLHHSGVLLENSDFGLEREL 120
           DL+                DS   PPGGWASL KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDEKYLELSSTHDSKHESESSTAQIEVNSDLSASASASDCAWSLYDDLYLDTVYNDSES 180
           GPD+      +T D     E  +  +        S   +   WSLYDDLY DT+      
Sbjct: 121 GPDQNLDPKPTTTDLALNDEEVSKPV-------GSGLETTSFWSLYDDLYTDTIPAPPPE 180

Query: 181 PDVLDPQIGGTKVEKGVFVSDGEFCASKRRKICRSMGSHLASGVWNLSREQGNKLLRSQF 240
             + D +    ++E        +    KRRKICRS+GSHLASG WNLSREQGNKLL S+F
Sbjct: 181 DSIDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRF 240

Query: 241 RGDCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKID-LKCAFCSCN 300
           RGDCLYIC+WPGC+H+EEKRNYMLFRG FK+FK S VWRTI DGNR+K   LKCAFC C+
Sbjct: 241 RGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCD 300

Query: 301 ETWDLHSGFCLRRVFGYHDDGEPVVRAYVC 314
           ETWDLHS FCLRRVFG+HDDGEPVVRAYVC
Sbjct: 301 ETWDLHSSFCLRRVFGFHDDGEPVVRAYVC 320

[Close]

BLAST of CmoCh01G003290.1 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 55.1 bits (131), Expect = 2.7e-07
Identity = 28/110 (25.45%), Postives = 59/110 (53.64%), Query Frame = 0


Query: 403 HIAPNGDWTQMAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSS 462
           + +P+G W  +A +     V+L++ +TGQ+    RGH+G + Q+S++  S   +L S S 
Sbjct: 367 YFSPDGKW--IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADS--RLLLSGSK 426

Query: 463 DGTIRSWDVRNFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFW 513
           D T++ W++R  +++     G + E+F+  +      +++ G    +  W
Sbjct: 427 DSTLKIWEIRT-KKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471

[Close]

BLAST of CmoCh01G003290.1 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 53.5 bits (127), Expect = 7.8e-07
Identity = 46/200 (23.00%), Postives = 85/200 (42.50%), Query Frame = 0


Query: 413 MAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVR 472
           +A     N VK+++ ++G  +     H   +  + F   +  H L S S DGT+R+WD +
Sbjct: 404 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN--HSLLSASLDGTVRAWDFK 463

Query: 473 NFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRK-QVACLEDSHVEDV 532
            ++   + +  P+   F       S +++ AG       + W  +  Q+  +   H   V
Sbjct: 464 RYKNYKTYTT-PTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPV 523

Query: 533 TQVHFIPGHQAKLASASVDGLVCIFD---TNGDIDDDEHMDSVINVGTSVGKIGFFGENY 592
             + F P  Q  LAS+S D  V ++D   + G ++   H   V+ V         F  + 
Sbjct: 524 HGLMFSPLTQL-LASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVA--------FRPDG 583

Query: 593 RKLWCLTHIETLSLWDWTDG 609
           ++L   T    ++ WD  +G
Sbjct: 584 KQLASSTLDGQINFWDTIEG 591

[Close]

BLAST of CmoCh01G003290.1 vs. TAIR 10
Match: AT1G15440.2 (periodic tryptophan protein 2 )

HSP 1 Score: 53.5 bits (127), Expect = 7.8e-07
Identity = 46/200 (23.00%), Postives = 85/200 (42.50%), Query Frame = 0


Query: 413 MAVSLSSNVVKLYSPVTGQYYGECRGHIGTINQISFAVPSIPHVLHSCSSDGTIRSWDVR 472
           +A     N VK+++ ++G  +     H   +  + F   +  H L S S DGT+R+WD +
Sbjct: 364 LATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN--HSLLSASLDGTVRAWDFK 423

Query: 473 NFQQVSSISAGPSQEIFSFAYGGSSMNLLAAGCKSQILFWDWRNRK-QVACLEDSHVEDV 532
            ++   + +  P+   F       S +++ AG       + W  +  Q+  +   H   V
Sbjct: 424 RYKNYKTYTT-PTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPV 483

Query: 533 TQVHFIPGHQAKLASASVDGLVCIFD---TNGDIDDDEHMDSVINVGTSVGKIGFFGENY 592
             + F P  Q  LAS+S D  V ++D   + G ++   H   V+ V         F  + 
Sbjct: 484 HGLMFSPLTQL-LASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVA--------FRPDG 543

Query: 593 RKLWCLTHIETLSLWDWTDG 609
           ++L   T    ++ WD  +G
Sbjct: 544 KQLASSTLDGQINFWDTIEG 551

The following BLAST results are available for this feature:

BLAST of CmoCh01G003290.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944S2	3.8e-123	62.12	WD repeat-containing protein GTS1 OS=Arabidopsis thaliana OX=3702 GN=GTS1 PE=2 S...	[more]
Q8LEA8	2.6e-108	58.48	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q54QU5	4.7e-33	32.84	WD repeat-containing protein 89 homolog OS=Dictyostelium discoideum OX=44689 GN=...	[more]
Q9D0R9	7.3e-26	30.04	WD repeat-containing protein 89 OS=Mus musculus OX=10090 GN=Wdr89 PE=2 SV=1	[more]
Q5FVP5	1.1e-24	30.15	WD repeat-containing protein 89 OS=Rattus norvegicus OX=10116 GN=Wdr89 PE=2 SV=1	[more]

BLAST of CmoCh01G003290.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAT4	4.7e-193	100.00	WD repeat-containing protein 89 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KH06	3.5e-188	97.54	WD repeat-containing protein 89 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1GA36	2.9e-187	100.00	phytochrome A-associated F-box protein OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KCS4	1.2e-180	97.12	phytochrome A-associated F-box protein-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CNT7	5.5e-178	91.05	WD repeat-containing protein 89 homolog OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmoCh01G003290.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948760.1	9.7e-193	100.00	WD repeat-containing protein 89 homolog [Cucurbita moschata]	[more]
KAG6606965.1	2.0e-190	98.77	WD repeat-containing protein GTS1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023522094.1	7.7e-190	98.46	WD repeat-containing protein 89 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022998528.1	7.2e-188	97.54	WD repeat-containing protein 89 homolog [Cucurbita maxima]	[more]
XP_022948761.1	6.1e-187	100.00	phytochrome A-associated F-box protein [Cucurbita moschata]	[more]

BLAST of CmoCh01G003290.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47790.1	2.7e-124	62.12	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02440.1	1.9e-109	58.48	F-box family protein	[more]
AT5G52820.1	2.7e-07	25.45	WD-40 repeat family protein / notchless protein, putative	[more]
AT1G15440.1	7.8e-07	23.00	periodic tryptophan protein 2	[more]
AT1G15440.2	7.8e-07	23.00	periodic tryptophan protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 429..470 e-value: 0.019 score: 24.1 coord: 473..513 e-value: 3.8 score: 13.4 coord: 388..426 e-value: 440.0 score: 0.3 coord: 516..557 e-value: 0.0012 score: 28.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 436..479 score: 9.840087
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 5..46 e-value: 4.9E-4 score: 19.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 385..674 e-value: 7.4E-26 score: 92.8
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 3..313
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 3..313
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 398..663
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..59

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G003290	CmoCh01G003290	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G003290.1:exon:1693	CmoCh01G003290.1:exon:1693	exon
CmoCh01G003290.1:exon:1694	CmoCh01G003290.1:exon:1694	exon
CmoCh01G003290.1:exon:1695	CmoCh01G003290.1:exon:1695	exon
CmoCh01G003290.1:exon:1696	CmoCh01G003290.1:exon:1696	exon
CmoCh01G003290.1:exon:1697	CmoCh01G003290.1:exon:1697	exon
CmoCh01G003290.1:exon:1698	CmoCh01G003290.1:exon:1698	exon
CmoCh01G003290.1:exon:1699	CmoCh01G003290.1:exon:1699	exon
CmoCh01G003290.1:exon:1700	CmoCh01G003290.1:exon:1700	exon
CmoCh01G003290.1:exon:1701	CmoCh01G003290.1:exon:1701	exon
CmoCh01G003290.1:exon:1702	CmoCh01G003290.1:exon:1702	exon
CmoCh01G003290.1:exon:1703	CmoCh01G003290.1:exon:1703	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_2	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_3	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_4	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_5	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_6	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_7	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_8	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_9	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_10	CDS
CmoCh01G003290.1:cds	CmoCh01G003290.1:cds_11	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G003290.1	CmoCh01G003290.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0010099	regulation of photomorphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding