Cmc08g0223841 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGTTTAGTCTAGGCGTTTTTTTTAAGGCACTACCGCCGGTACCAGCCGCCTCCATTTCCATCACCTTCCCTCCATCTCTCTCATCTCGCATCTCCTCTTTCGGCTACTCTTCTTCCATCTATACGATCTCCGCCGCCACAACGGCCAATATCAATCGCCTCCTCTTCTTTTATCTCTCAAGACACTACCCAATATCAATCCTTCCCAACGTCAATCTAAAATCAAACTGGTACAAGGCATAAACTTGAAGAAATGAAAAATTGAAAGATCATAGAACTTCAATCTTACGAATTTGAAGAGGAGAGGGAAAAACTCCAGCAGGCGTACGAGAGCTGACTACGGAGGGCAGGCGGGAGGTTAGTACCGAAATTACTGAAATTTGAAAGATTTACTGAAATTAGGGTTGGGTCTAGTCTTATTAGAGAAATTATGATGAATCGGATTAGGTTGGGGGTTCATTTGTGCTATATGTAAATTCTGAATTTATTGTACAGAATGAATTTTCTTTTCTTAGGCTCAAACCATGAATTTTTGGCTTTGAGGAAAAAATGATATAATTTGATTTAAATATTGAAAGTTTTTAGAACTGGATTAAGCGTTTTTAGACCCAAGTTGTAATACCAAAATTCTTACATATTGGTCTGTTATAATTGCACTTTCTGAGGTTAATGTGAATGCTTTTCCCTCGTTTTTTGTATTAACTATTGGTCCGTTATAGTTTTCGAGAGTATATATCGATCTTTATATTATTCAATATATATGAATTTCATTGATGCTCTAAACTATCGTGTCCTTTGTGTGCTTCTGATCATGTCTTATTCTTTTTTTTGGAGAAACATAATTTAGCATATGTGCGTACCACATCTTATTGTTTTTAACTTTTAAGATGATTTCACTTTTTATGTGATCCTTGTGTTTCAGAAAATAGATGTTCAATGTTATTACTAGGCTATGTGATAGTTGTGATCAACTTATGGTTGATGGTTGTTTATTTATGCTAGATAACTTTTTCTCATTTAGCAGGTTAATTGGTGCAATGGGACGGAAGAAAACTGAAGAAGGTGGTGGAAACGCCAAAGCCAAGGCTGGTAAAGATGTTTCTGGGAAGAGAGAGAAGCTTCAGTGTCAGAAATGCTTGCCAGTATGGATCAGAAATCAGATAAACCGAGAAAAGGATCTTCATCGTTGGGTGGTGGTGCTAAACCTCAAGCAAAGGCTCCAAAAAAGGTTGCAGCTTACACTGATGGCATTGATCTCCCCCCCTCTGATGATGAGGAAGAAGAAATTGTGTCTGATGAGGAGCAACAGAGTACCAGTTCCCAGAAACGGCTACCGTGGCAGGACAGGGCTGAGTTGAAGCCTTTGGAGGTGGCTGTAAGTGATAAAGAGTTGAAGAAACGAGAGAGGAAAGATATGTTTGCTGCCCATGCTGCAGAACAGGCCAGACAAGAAGCTCTATAAGATGACCATGATGCTTTCACTGTTGTAATTGGCAGTCGAGCTTTGGTTCTTGATGGTAATGATGAAGCTGATGAAAATGTCAAAGACATTACAATTGATAATTTCTCTGTCT TAAGTTTAGTCTAGGCGTTTTTTTTAAGGCACTACCGCCGGTACCAGCCGCCTCCATTTCCATCACCTTCCCTCCATCTCTCTCATCTCGCATCTCCTCTTTCGGCTACTCTTCTTCCATCTATACGATCTCCGCCGCCACAACGGCCAATATCAATCGCCTCCTCTTCTTTTATCTCTCAAGACACTACCCAATATCAATCCTTCCCAACGTCAATCTAAAATCAAACTGGTACAAGGCATAAACTTGAAGAAATGAAAAATTGAAAGATCATAGAACTTCAATCTTACGAATTTGAAGAGGAGAGGGAAAAACTCCAGCAGGCGTACGAGAGCTGACTACGGAGGGCAGGCGGGAGGTTAATTGGTGCAATGGGACGGAAGAAAACTGAAGAAGGTGGTGGAAACGCCAAAGCCAAGGCTGGTAAAGATGTTTCTGGGAAGAGAGAGAAGCTTCAGTGTCAGAAATGCTTGCCAGTATGGATCAGAAATCAGATAAACCGAGAAAAGGATCTTCATCGTTGGGTGGTGGTGCTAAACCTCAAGCAAAGGCTCCAAAAAAGGTTGCAGCTTACACTGATGGCATTGATCTCCCCCCCTCTGATGATGAGGAAGAAGAAATTGTGTCTGATGAGGAGCAACAGAGTACCAGTTCCCAGAAACGGCTACCGTGGCAGGACAGGGCTGAGTTGAAGCCTTTGGAGGTGGCTGTAAGTGATAAAGAGTTGAAGAAACGAGAGAGGAAAGATATGTTTGCTGCCCATGCTGCAGAACAGGCCAGACAAGAAGCTCTATAAGATGACCATGATGCTTTCACTGTTGTAATTGGCAGTCGAGCTTTGGTTCTTGATGGTAATGATGAAGCTGATGAAAATGTCAAAGACATTACAATTGATAATTTCTCTGTCT ATGCTTGCCAGTATGGATCAGAAATCAGATAAACCGAGAAAAGGATCTTCATCGTTGGGTGGTGGTGCTAAACCTCAAGCAAAGGCTCCAAAAAAGGTTGCAGCTTACACTGATGGCATTGATCTCCCCCCCTCTGATGATGAGGAAGAAGAAATTGTGTCTGATGAGGAGCAACAGAGTACCAGTTCCCAGAAACGGCTACCGTGGCAGGACAGGGCTGAGTTGAAGCCTTTGGAGGTGGCTGTAAGTGATAAAGAGTTGAAGAAACGAGAGAGGAAAGATATGTTTGCTGCCCATGCTGCAGAACAGGCCAGACAAGAAGCTCTATAA MLASMDQKSDKPRKGSSSLGGGAKPQAKAPKKVAAYTDGIDLPPSDDEEEEIVSDEEQQSTSSQKRLPWQDRAELKPLEVAVSDKELKKRERKDMFAAHAAEQARQEAL Homology
BLAST of Cmc08g0223841 vs. NCBI nr
Match: XP_008462810.1 (PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >XP_008462811.1 PREDICTED: ABC transporter F family member 4-like [Cucumis melo] >KAA0066330.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa] >TYK00949.1 ABC transporter F family member 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 197.2 bits (500), Expect = 7.3e-47 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. NCBI nr
Match: XP_004151853.3 (ABC transporter F family member 4 [Cucumis sativus] >XP_011650048.2 ABC transporter F family member 4 [Cucumis sativus] >XP_031736813.1 ABC transporter F family member 4 [Cucumis sativus] >KAE8652333.1 hypothetical protein Csa_022120 [Cucumis sativus]) HSP 1 Score: 197.2 bits (500), Expect = 7.3e-47 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. NCBI nr
Match: XP_038881811.1 (ABC transporter F family member 4 [Benincasa hispida] >XP_038881812.1 ABC transporter F family member 4 [Benincasa hispida]) HSP 1 Score: 194.9 bits (494), Expect = 3.6e-46 Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. NCBI nr
Match: XP_011653838.2 (ABC transporter F family member 4 [Cucumis sativus] >XP_031740087.1 ABC transporter F family member 4 [Cucumis sativus] >XP_031740088.1 ABC transporter F family member 4 [Cucumis sativus] >XP_031740089.1 ABC transporter F family member 4 [Cucumis sativus] >KAE8649655.1 hypothetical protein Csa_012647 [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45 Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Cmc08g0223841 vs. NCBI nr
Match: XP_022950736.1 (ABC transporter F family member 4-like [Cucurbita moschata] >XP_022950737.1 ABC transporter F family member 4-like [Cucurbita moschata] >KAG7033624.1 ABC transporter F family member 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy Swiss-Prot
Match: Q9M1H3 (ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.9e-16 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy TrEMBL
Match: A0A1S3CJD6 (ABC transporter F family member 4-like OS=Cucumis melo OX=3656 GN=LOC103501091 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy TrEMBL
Match: A0A5A7VGP5 (ABC transporter F family member 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001250 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy TrEMBL
Match: A0A0A0LNE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G431120 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.5e-47 Identity = 108/109 (99.08%), Postives = 108/109 (99.08%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy TrEMBL
Match: A0A6J1GFN1 (ABC transporter F family member 4-like OS=Cucurbita moschata OX=3662 GN=LOC111453748 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.7e-46 Identity = 105/109 (96.33%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of Cmc08g0223841 vs. ExPASy TrEMBL
Match: A0A6J1HRM6 (ABC transporter F family member 4-like OS=Cucurbita maxima OX=3661 GN=LOC111467170 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44 Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of Cmc08g0223841 vs. TAIR 10
Match: AT3G54540.1 (general control non-repressible 4 ) HSP 1 Score: 84.7 bits (208), Expect = 4.9e-17 Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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