Cmc07g0193821 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193821
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	CMiso1.1chr07: 15926366 .. 15928842 (+)
RNA-Seq Expression	Cmc07g0193821
Synteny	Cmc07g0193821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGAATTTGAAATATGGGCCAAATTTCATTTGGACTTTAAAAAAGAGGCCATCCGGATAAATTACCTTGCTACTACCTCTGTGGTGGTTTGTTGAAACCTATTGATGTATTTTGAATAGAAATATATCGAGATTGTGGAGATTTGAGGAACAGCTCTGTCAAACTCCAACACAGGAAAGGCAAAGCACGGCTGCAAAACCACACCTATCGACACAGTTATTCCAACTAGAGCCTGGTTGTTGCCTACGCATTTCTTCTCATTAACTTGCTTCTTCAGATTGATGAATGAATGGACCATCGCAGGCTCTGTCCAAATCAAAGCCATTAATCGCCAATGTCTATCGCTACGACTCACTGCTCCGCCACTATGCCGCCACTCGCTCTCTCAACAAAACCAAAATTCTCCATGCCCACACAATCACTTCTGGGATTCTGCACTCTCCCAACTTCATCCATCTTCCATCACACCTCGCTGTCTCCTATGCGTTTTGTGGGTGCGTCCCACTTGCACGCAAGCTGTTCGATGATTTGTCTGACCCTAGTTTGTTTTTATGGAACGCCATAATTAAAATGTATGTGGACAAGGGCTTTCATTTTGATGCACTTAGGGTGTTCGATTCAATGATTTGTTCGGGGAAGTGCTGGCCGGATAAGTATACATTCCCTTTGGTTATCAAATCTTGTAGTGTTATGTCAATGCTTAATGTTGGAGTTTTGATTCATGGACGAGCTCTAGTATCTGGGTTTTCTTCAAACATGTTTGTGCAAAATTCCTTGCTAGCAATGTACATGAACTGCGGGAAAATGGAGCTAGCGAGACAGGTTTTCGATGTAATGCTGGACCGGAGTGTGGTTTCATGGAACACGATGATCAGTGGGTGGTTTCAGAATGGGCGGCCAGAGGAAGCTCTGGCGGTTTTTAACCGCATGATGGATGCAAGAGTTGAACCTGACTCTGCCACGATTGTGTCTGTATTGCCATCATGTGGTTACTTGAAGGAGTTGGAATTGGGAATTAAGGTTCATAAACTAGTGCAAAAAAACCATTTACAAGAGAAGATTGAAGTAAGGAATGCACTTGTGGATATGTATTCGAGATGTGGTGGTATGGGTGAGGCATCACTAGTTTTCGCGGAGACAAATGAGAAGGATGTTATTACTTGGACTTCGATGATTAATGGCTATATCATGAATGGAAATGCCAAGAGTGCTTTGGCTCTTTGCCCGGCAATGCAGCTCGATGGAGTAGTGCCAAACGTAGTGACTTTAGCTTCTCTTCTCTCTGCCTGCGCAAGCTTGTGTTGTTTGAAGCAAGGGAAGAGCTTACATGCTTGGGTACTCAGGAAAAAACTTGACTCTGATGTACTCGTGGTTACTGCTTTGATAGACATGTATGCAAAATGTAATGCTGTGAGCTATAGTTTTCAAGTGTTTGCGAAGACATCAAAGAAGAGAACTGTCCCTTGGAATGCACTTCTCTCGGGGCTCATTCATAATGAACTTCCAAGAGAAGCAGTGGGACTCTTTAAAAGTATGCTCATTGAAGAAGTAGAAGCAAACCATGCTACTTTCAGTAGTGTCATCCCAGCTTATGCCATTCTAGCAGATTTGAAGCAAGTGATGAATTTACATTCCTACTTGGTGAGATCTGGCTTTATTTCAAAAATTGCTGTTATCACTGGTTTGATAAATATGTACTCAAAATGTGGAAGTTTAGACTATGCCCATAAGATTTTCGATGAAATTCCAAACAAAGAGAAGGACATTATTGTGTGGAGTGTTTTGATAGCTGGCTATGGAATGCATGGACATGGTGAGACTGCTGTTTTGCTTTTCAACCAGATGGTTCGTTCCGGGATGAAACCGAATGAGATAACTTTCACTTCTGTTTTACATGCTTGCAGCCATAGAGGATTGGTAGATGATGGTTTGGCATTGTTCAAGTATATGATCGAAAACCATCCGTCGAGTCCACGCCCCAATCACTACACCTGTATTGTTGATCTTCTTGGTCGTGCTGGTCGATTGGATGAAGCATATGATTTGATCAAGTCAACGCCATTCCAGCAGAACCATTCTATTTGGGGGGCTCTGCTTGGTGCGTGCTCGATACACCAGAATGTCGAACTTGGAGAGGTAGCAGCAGAGCAACTTTTCGAGCTTGAGCCTGAAAATACGGGAAACTATATATTACTTGCAAATATTTATGCTGCGATTGGAAGATGGAAAGATGCAGAGAATGTGAGGCATATAATGAGTAAAATAGGCCTAAGAAAGATGCCTGCACAAAGTTCAGTTGGTGCAGCTGTGTAGTAAAATTTAGATTTTTAATACATCTATATATATTTAAATCTTCTTGATAAAACTATTAAAATTTGTATGTTTTATTTCTCCGGCAGCGGGCGCTCAAAGAGCGAAAATTTTGAAATGTTTTATGAAAGTTAATTGGTAAATTTTGTTTTTGGTCTTGTGTTTT

mRNA sequence

TTAGAATTTGAAATATGGGCCAAATTTCATTTGGACTTTAAAAAAGAGGCCATCCGGATAAATTACCTTGCTACTACCTCTGTGGTGGTTTGTTGAAACCTATTGATGTATTTTGAATAGAAATATATCGAGATTGTGGAGATTTGAGGAACAGCTCTGTCAAACTCCAACACAGGAAAGGCAAAGCACGGCTGCAAAACCACACCTATCGACACAGTTATTCCAACTAGAGCCTGGTTGTTGCCTACGCATTTCTTCTCATTAACTTGCTTCTTCAGATTGATGAATGAATGGACCATCGCAGGCTCTGTCCAAATCAAAGCCATTAATCGCCAATGTCTATCGCTACGACTCACTGCTCCGCCACTATGCCGCCACTCGCTCTCTCAACAAAACCAAAATTCTCCATGCCCACACAATCACTTCTGGGATTCTGCACTCTCCCAACTTCATCCATCTTCCATCACACCTCGCTGTCTCCTATGCGTTTTGTGGGTGCGTCCCACTTGCACGCAAGCTGTTCGATGATTTGTCTGACCCTAGTTTGTTTTTATGGAACGCCATAATTAAAATGTATGTGGACAAGGGCTTTCATTTTGATGCACTTAGGGTGTTCGATTCAATGATTTGTTCGGGGAAGTGCTGGCCGGATAAGTATACATTCCCTTTGGTTATCAAATCTTGTAGTGTTATGTCAATGCTTAATGTTGGAGTTTTGATTCATGGACGAGCTCTAGTATCTGGGTTTTCTTCAAACATGTTTGTGCAAAATTCCTTGCTAGCAATGTACATGAACTGCGGGAAAATGGAGCTAGCGAGACAGGTTTTCGATGTAATGCTGGACCGGAGTGTGGTTTCATGGAACACGATGATCAGTGGGTGGTTTCAGAATGGGCGGCCAGAGGAAGCTCTGGCGGTTTTTAACCGCATGATGGATGCAAGAGTTGAACCTGACTCTGCCACGATTGTGTCTGTATTGCCATCATGTGGTTACTTGAAGGAGTTGGAATTGGGAATTAAGGTTCATAAACTAGTGCAAAAAAACCATTTACAAGAGAAGATTGAAGTAAGGAATGCACTTGTGGATATGTATTCGAGATGTGGTGGTATGGGTGAGGCATCACTAGTTTTCGCGGAGACAAATGAGAAGGATGTTATTACTTGGACTTCGATGATTAATGGCTATATCATGAATGGAAATGCCAAGAGTGCTTTGGCTCTTTGCCCGGCAATGCAGCTCGATGGAGTAGTGCCAAACGTAGTGACTTTAGCTTCTCTTCTCTCTGCCTGCGCAAGCTTGTGTTGTTTGAAGCAAGGGAAGAGCTTACATGCTTGGGTACTCAGGAAAAAACTTGACTCTGATGTACTCGTGGTTACTGCTTTGATAGACATGTATGCAAAATGTAATGCTGTGAGCTATAGTTTTCAAGTGTTTGCGAAGACATCAAAGAAGAGAACTGTCCCTTGGAATGCACTTCTCTCGGGGCTCATTCATAATGAACTTCCAAGAGAAGCAGTGGGACTCTTTAAAAGTATGCTCATTGAAGAAGTAGAAGCAAACCATGCTACTTTCAGTAGTGTCATCCCAGCTTATGCCATTCTAGCAGATTTGAAGCAAGTGATGAATTTACATTCCTACTTGGTGAGATCTGGCTTTATTTCAAAAATTGCTGTTATCACTGGTTTGATAAATATGTACTCAAAATGTGGAAGTTTAGACTATGCCCATAAGATTTTCGATGAAATTCCAAACAAAGAGAAGGACATTATTGTGTGGAGTGTTTTGATAGCTGGCTATGGAATGCATGGACATGGTGAGACTGCTGTTTTGCTTTTCAACCAGATGGTTCGTTCCGGGATGAAACCGAATGAGATAACTTTCACTTCTGTTTTACATGCTTGCAGCCATAGAGGATTGGTAGATGATGGTTTGGCATTGTTCAAGTATATGATCGAAAACCATCCGTCGAGTCCACGCCCCAATCACTACACCTGTATTGTTGATCTTCTTGGTCGTGCTGGTCGATTGGATGAAGCATATGATTTGATCAAGTCAACGCCATTCCAGCAGAACCATTCTATTTGGGGGGCTCTGCTTGGTGCGTGCTCGATACACCAGAATGTCGAACTTGGAGAGGTAGCAGCAGAGCAACTTTTCGAGCTTGAGCCTGAAAATACGGGAAACTATATATTACTTGCAAATATTTATGCTGCGATTGGAAGATGGAAAGATGCAGAGAATGTGAGGCATATAATGAGTAAAATAGGCCTAAGAAAGATGCCTGCACAAAGTTCAGTTGGTGCAGCTGTGTAGTAAAATTTAGATTTTTAATACATCTATATATATTTAAATCTTCTTGATAAAACTATTAAAATTTGTATGTTTTATTTCTCCGGCAGCGGGCGCTCAAAGAGCGAAAATTTTGAAATGTTTTATGAAAGTTAATTGGTAAATTTTGTTTTTGGTCTTGTGTTTT

Coding sequence (CDS)

ATGAATGGACCATCGCAGGCTCTGTCCAAATCAAAGCCATTAATCGCCAATGTCTATCGCTACGACTCACTGCTCCGCCACTATGCCGCCACTCGCTCTCTCAACAAAACCAAAATTCTCCATGCCCACACAATCACTTCTGGGATTCTGCACTCTCCCAACTTCATCCATCTTCCATCACACCTCGCTGTCTCCTATGCGTTTTGTGGGTGCGTCCCACTTGCACGCAAGCTGTTCGATGATTTGTCTGACCCTAGTTTGTTTTTATGGAACGCCATAATTAAAATGTATGTGGACAAGGGCTTTCATTTTGATGCACTTAGGGTGTTCGATTCAATGATTTGTTCGGGGAAGTGCTGGCCGGATAAGTATACATTCCCTTTGGTTATCAAATCTTGTAGTGTTATGTCAATGCTTAATGTTGGAGTTTTGATTCATGGACGAGCTCTAGTATCTGGGTTTTCTTCAAACATGTTTGTGCAAAATTCCTTGCTAGCAATGTACATGAACTGCGGGAAAATGGAGCTAGCGAGACAGGTTTTCGATGTAATGCTGGACCGGAGTGTGGTTTCATGGAACACGATGATCAGTGGGTGGTTTCAGAATGGGCGGCCAGAGGAAGCTCTGGCGGTTTTTAACCGCATGATGGATGCAAGAGTTGAACCTGACTCTGCCACGATTGTGTCTGTATTGCCATCATGTGGTTACTTGAAGGAGTTGGAATTGGGAATTAAGGTTCATAAACTAGTGCAAAAAAACCATTTACAAGAGAAGATTGAAGTAAGGAATGCACTTGTGGATATGTATTCGAGATGTGGTGGTATGGGTGAGGCATCACTAGTTTTCGCGGAGACAAATGAGAAGGATGTTATTACTTGGACTTCGATGATTAATGGCTATATCATGAATGGAAATGCCAAGAGTGCTTTGGCTCTTTGCCCGGCAATGCAGCTCGATGGAGTAGTGCCAAACGTAGTGACTTTAGCTTCTCTTCTCTCTGCCTGCGCAAGCTTGTGTTGTTTGAAGCAAGGGAAGAGCTTACATGCTTGGGTACTCAGGAAAAAACTTGACTCTGATGTACTCGTGGTTACTGCTTTGATAGACATGTATGCAAAATGTAATGCTGTGAGCTATAGTTTTCAAGTGTTTGCGAAGACATCAAAGAAGAGAACTGTCCCTTGGAATGCACTTCTCTCGGGGCTCATTCATAATGAACTTCCAAGAGAAGCAGTGGGACTCTTTAAAAGTATGCTCATTGAAGAAGTAGAAGCAAACCATGCTACTTTCAGTAGTGTCATCCCAGCTTATGCCATTCTAGCAGATTTGAAGCAAGTGATGAATTTACATTCCTACTTGGTGAGATCTGGCTTTATTTCAAAAATTGCTGTTATCACTGGTTTGATAAATATGTACTCAAAATGTGGAAGTTTAGACTATGCCCATAAGATTTTCGATGAAATTCCAAACAAAGAGAAGGACATTATTGTGTGGAGTGTTTTGATAGCTGGCTATGGAATGCATGGACATGGTGAGACTGCTGTTTTGCTTTTCAACCAGATGGTTCGTTCCGGGATGAAACCGAATGAGATAACTTTCACTTCTGTTTTACATGCTTGCAGCCATAGAGGATTGGTAGATGATGGTTTGGCATTGTTCAAGTATATGATCGAAAACCATCCGTCGAGTCCACGCCCCAATCACTACACCTGTATTGTTGATCTTCTTGGTCGTGCTGGTCGATTGGATGAAGCATATGATTTGATCAAGTCAACGCCATTCCAGCAGAACCATTCTATTTGGGGGGCTCTGCTTGGTGCGTGCTCGATACACCAGAATGTCGAACTTGGAGAGGTAGCAGCAGAGCAACTTTTCGAGCTTGAGCCTGAAAATACGGGAAACTATATATTACTTGCAAATATTTATGCTGCGATTGGAAGATGGAAAGATGCAGAGAATGTGAGGCATATAATGAGTAAAATAGGCCTAAGAAAGATGCCTGCACAAAGTTCAGTTGGTGCAGCTGTGTAG

Protein sequence

MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIEEVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACSHRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWGALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIGLRKMPAQSSVGAAV

Homology

[Close]

BLAST of Cmc07g0193821 vs. NCBI nr
Match: XP_008460253.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Cucumis melo] >KAA0066496.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK06145.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1361.3 bits (3522), Expect = 0.0e+00
Identity = 675/675 (100.00%), Postives = 675/675 (100.00%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS
Sbjct: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW
Sbjct: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV
Sbjct: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL
Sbjct: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY
Sbjct: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV
Sbjct: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA
Sbjct: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI
Sbjct: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRKMPAQSSVGAAV
Sbjct: 661 GLRKMPAQSSVGAAV 675

[Close]

BLAST of Cmc07g0193821 vs. NCBI nr
Match: XP_011653372.1 (pentatricopeptide repeat-containing protein At5g39350 [Cucumis sativus] >KGN53685.1 hypothetical protein Csa_014594 [Cucumis sativus])

HSP 1 Score: 1290.0 bits (3337), Expect = 0.0e+00
Identity = 639/675 (94.67%), Postives = 654/675 (96.89%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MN PSQALSKSK LIANV+R DSLL HYAATRSLNKTKILH HTITSG+LHSPNFIHLPS
Sbjct: 1   MNKPSQALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW
Sbjct: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+ LARQV
Sbjct: 121 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           F+VML RSVVSWNTMISGWFQNGRPEEALAVFN MMDARVEPDSATIVS LPSCG+LKEL
Sbjct: 181 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGM EASLVFAET EKDVITWTSMINGY
Sbjct: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           IMNGNAKSALALCPAMQLDGVVPN VTLASLLSACASLCCLKQGKSLHAWV+RKKLDSDV
Sbjct: 301 IMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTS KRTVPWNALLSGLIHNEL REAVGLFKSMLIE
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIE 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+SVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLI+MYSKCGSLDYA
Sbjct: 421 EVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV SGM+PNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGL LFKYMIEN+PSSP PNHYTC+VDLLGRAGRLDEAYDLIKS PFQQNHSIW
Sbjct: 541 HRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGAC IHQNVELGEVAAE+LFELEPE+TGNYILLANIYAA+GRWKDAENVRHIMSKI
Sbjct: 601 GALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRK PAQSSVG AV
Sbjct: 661 GLRKTPAQSSVGVAV 675

[Close]

BLAST of Cmc07g0193821 vs. NCBI nr
Match: XP_038905919.1 (pentatricopeptide repeat-containing protein At5g39350 [Benincasa hispida])

HSP 1 Score: 1245.3 bits (3221), Expect = 0.0e+00
Identity = 616/675 (91.26%), Postives = 644/675 (95.41%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQALSKSK LIA V+R+DSLLRHYA TRSLNKTKILHAHTITSGILHSPNFIHL S
Sbjct: 1   MNGPSQALSKSKSLIAIVHRFDSLLRHYAVTRSLNKTKILHAHTITSGILHSPNFIHLLS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           +LAVSYAFCGCVPLARKLFDDLSDPSLFL NAIIKMYVDKG HFDAL VF SMICSGKCW
Sbjct: 61  NLAVSYAFCGCVPLARKLFDDLSDPSLFLRNAIIKMYVDKGLHFDALIVFHSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CS MSML VGVLI GRALVSGFSSNMFVQNSLLAMYMNCGKMELAR+V
Sbjct: 121 PDKYTFPLVIKACSEMSMLKVGVLIQGRALVSGFSSNMFVQNSLLAMYMNCGKMELARRV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVM +RSVVSWNTMISGWFQNGRPEEAL VFNRM+DARVEPDSAT+VSVLPSCGYLK+L
Sbjct: 181 FDVMPERSVVSWNTMISGWFQNGRPEEALVVFNRMVDARVEPDSATMVSVLPSCGYLKDL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELG KVHKLV+KNHLQEKIEVRNALVDMYSRCG M EAS VFAETNEKDVITWTSMINGY
Sbjct: 241 ELGSKVHKLVEKNHLQEKIEVRNALVDMYSRCGCMDEASQVFAETNEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           I+NGNA+SALALCPAMQLDGVVPN VTLASLLSAC+SLCCLKQGKSLHAWV+RKKLDSDV
Sbjct: 301 IINGNARSALALCPAMQLDGVVPNSVTLASLLSACSSLCCLKQGKSLHAWVMRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHN   REAVGLFK+ML+E
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNGRAREAVGLFKTMLME 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEAN ATF+SVIPAYAILADLKQV+NLHSYLVRSGFIS+I VITGLI++YSKCGSLDYA
Sbjct: 421 EVEANQATFNSVIPAYAILADLKQVLNLHSYLVRSGFISRIEVITGLIDIYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNK+KDIIVWSV+IAGYGMHGHGETAV LFNQMV+SG+KPNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKDKDIIVWSVVIAGYGMHGHGETAVSLFNQMVQSGVKPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPSSPRPNHYTC+VDLLGRAGRLDEAYDLIKS PFQ NHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQHNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGE AAE+LFELEPENTGNYILLANIYA +GRWKDAE VRH MSKI
Sbjct: 601 GALLGACSIHQNVELGEAAAERLFELEPENTGNYILLANIYATVGRWKDAEKVRHTMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRKMPAQSSVG AV
Sbjct: 661 GLRKMPAQSSVGVAV 675

[Close]

BLAST of Cmc07g0193821 vs. NCBI nr
Match: KAG6581699.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 587/672 (87.35%), Postives = 629/672 (93.60%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQAL  SKPLIA ++R +SLLR YAA RSL+KTKILHAH ITSGILHS NFI L S
Sbjct: 1   MNGPSQALFNSKPLIAILHRCESLLRRYAAARSLSKTKILHAHAITSGILHSSNFIDLRS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
            LAVSYAFCG VPLARKLFD+LSD SLFLWNAIIKMYVD+G HFDALR+F SMI SGKCW
Sbjct: 61  KLAVSYAFCGYVPLARKLFDELSDRSLFLWNAIIKMYVDRGLHFDALRMFYSMINSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CS MSML+VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+E+AR V
Sbjct: 121 PDKYTFPLVIKACSEMSMLDVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKLEIARWV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVM +RSVVSWNTMISGWFQNG+PEEAL VFNRMMDARVEPDSAT+VSVLP+CGYLKEL
Sbjct: 181 FDVMPERSVVSWNTMISGWFQNGQPEEALVVFNRMMDARVEPDSATMVSVLPTCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELG KVHKLV+ NHL E+IEVRNAL+DMYSRCG M EASLVF+ET E+DVITWTSMINGY
Sbjct: 241 ELGRKVHKLVENNHLHERIEVRNALIDMYSRCGCMDEASLVFSETKERDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           I+NGN KSALALCPAMQLDGV PN VTLASLLSACASLCCLKQGKSLHAWV+R+KLDSDV
Sbjct: 301 IINGNPKSALALCPAMQLDGVAPNAVTLASLLSACASLCCLKQGKSLHAWVMRQKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHN L REAV LFK+ML+E
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNGLAREAVELFKTMLME 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+S+IPAYAILADLKQVMNLHSYLVRSGFIS+IAV+TGLI++YSKCG LDYA
Sbjct: 421 EVEANHATFNSLIPAYAILADLKQVMNLHSYLVRSGFISRIAVVTGLIDIYSKCGCLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFD+I N++KDIIVWSV+IAGYGMHGHGE AV LFNQMV+SG+ PNEITFTSVLHACS
Sbjct: 481 HKIFDDIRNEDKDIIVWSVVIAGYGMHGHGEIAVSLFNQMVQSGVSPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPS PRPNHYTCIVDLLGRAGRLDEAYD+IKS PF+ NHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSRPRPNHYTCIVDLLGRAGRLDEAYDIIKSMPFKHNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGEVAAE+LFELE ENTGNYILLANIYAA+GRWKDAE VRH+MS I
Sbjct: 601 GALLGACSIHQNVELGEVAAERLFELESENTGNYILLANIYAAVGRWKDAEKVRHMMSNI 660

Query: 661 GLRKMPAQSSVG 673
           GLRKMPAQSSVG
Sbjct: 661 GLRKMPAQSSVG 672

[Close]

BLAST of Cmc07g0193821 vs. NCBI nr
Match: XP_022956303.1 (pentatricopeptide repeat-containing protein At5g39350 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1190.3 bits (3078), Expect = 0.0e+00
Identity = 586/672 (87.20%), Postives = 629/672 (93.60%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQAL  SKPLIA ++R +SLLR YAA RSL+KTKILHAH ITSGILHS NFI L S
Sbjct: 1   MNGPSQALFNSKPLIAILHRCESLLRRYAAARSLSKTKILHAHAITSGILHSSNFIDLRS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
            LAVSYAFCG VPLARKLFD+LSD SLFLWNAIIKMYVD+G HFDALR+F SMI SGKCW
Sbjct: 61  KLAVSYAFCGYVPLARKLFDELSDRSLFLWNAIIKMYVDRGLHFDALRMFYSMINSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CS MSML+VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+ELAR V
Sbjct: 121 PDKYTFPLVIKACSEMSMLDVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKLELARWV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVM +RSVVSWNTMISGWFQNG+PEEAL VFNRMMDARVEPDSAT+VSVLP+CGYLKEL
Sbjct: 181 FDVMPERSVVSWNTMISGWFQNGQPEEALVVFNRMMDARVEPDSATMVSVLPTCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELG KVHKLV+ NHL E+IEVRNAL+DMYSRCG M EASLVF+ET E+DVITWTSMINGY
Sbjct: 241 ELGRKVHKLVENNHLHERIEVRNALIDMYSRCGCMDEASLVFSETKERDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           I+NGN KSALALCPAMQLDGV PN VTLASLLSACASLCCLKQGKSLHAWV+R+KLDSDV
Sbjct: 301 IINGNPKSALALCPAMQLDGVAPNAVTLASLLSACASLCCLKQGKSLHAWVMRQKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHN L REAV LFK+ML+E
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNGLAREAVELFKTMLME 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+S+IPAYAILADLKQVMNLHSYLVRSGFIS+IAV+TGLI++YSKCG LDYA
Sbjct: 421 EVEANHATFNSLIPAYAILADLKQVMNLHSYLVRSGFISRIAVVTGLIDIYSKCGCLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFD+I N++KDIIVWSV+IAGYGMHGHGE AV LFNQMV+SG+ PNEITFTSVLHACS
Sbjct: 481 HKIFDDIRNEDKDIIVWSVVIAGYGMHGHGEIAVSLFNQMVQSGVSPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPS PRPNHYTCIVDLLGRAGRLDEAYD+IKS PF+ NHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSRPRPNHYTCIVDLLGRAGRLDEAYDIIKSMPFKHNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQN+ELGEVAAE+LF+LE ENTGNYILLANIYAA+GRWKDAE VRH+MS I
Sbjct: 601 GALLGACSIHQNIELGEVAAERLFDLESENTGNYILLANIYAAVGRWKDAEKVRHMMSNI 660

Query: 661 GLRKMPAQSSVG 673
           GLRKMPAQSSVG
Sbjct: 661 GLRKMPAQSSVG 672

[Close]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot
Match: Q9FLZ9 (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 4.3e-217
Identity = 360/670 (53.73%), Postives = 495/670 (73.88%), Query Frame = 0


Query: 5   SQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAV 64
           S+ L ++   +++V +Y SLL H+AAT+S++KTK LH H IT G +      H+ S L+V
Sbjct: 2   SEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG----HILSTLSV 61

Query: 65  SYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSG-KCWPDK 124
           +YA CG +  ARKLF+++   SL  +N +I+MYV +G + DA+ VF  M+  G KC PD 
Sbjct: 62  TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 121

Query: 125 YTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDV 184
           YT+P V K+   +  + +G+++HGR L S F  + +VQN+LLAMYMN GK+E+AR VFDV
Sbjct: 122 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 181

Query: 185 MLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKELELG 244
           M +R V+SWNTMISG+++NG   +AL +F+ M++  V+ D ATIVS+LP CG+LK+LE+G
Sbjct: 182 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 241

Query: 245 IKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMN 304
             VHKLV++  L +KIEV+NALV+MY +CG M EA  VF     +DVITWT MINGY  +
Sbjct: 242 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 301

Query: 305 GNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVV 364
           G+ ++AL LC  MQ +GV PN VT+ASL+S C     +  GK LH W +R+++ SD+++ 
Sbjct: 302 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 361

Query: 365 TALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIEEVE 424
           T+LI MYAKC  V   F+VF+  SK  T PW+A+++G + NEL  +A+GLFK M  E+VE
Sbjct: 362 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 421

Query: 425 ANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKI 484
            N AT +S++PAYA LADL+Q MN+H YL ++GF+S +   TGL+++YSKCG+L+ AHKI
Sbjct: 422 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 481

Query: 485 FDEI--PNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACSH 544
           F+ I   +K KD+++W  LI+GYGMHG G  A+ +F +MVRSG+ PNEITFTS L+ACSH
Sbjct: 482 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 541

Query: 545 RGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWG 604
            GLV++GL LF++M+E++ +  R NHYTCIVDLLGRAGRLDEAY+LI + PF+   ++WG
Sbjct: 542 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 601

Query: 605 ALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIG 664
           ALL AC  H+NV+LGE+AA +LFELEPENTGNY+LLANIYAA+GRWKD E VR +M  +G
Sbjct: 602 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVG 661

Query: 665 LRKMPAQSSV 672
           LRK P  S++
Sbjct: 662 LRKKPGHSTI 667

[Close]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 8.1e-131
Identity = 252/648 (38.89%), Postives = 382/648 (58.95%), Query Frame = 0


Query: 23  SLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 82
           S+L+  A ++SL   K +      +G +   N   L S L++ Y  CG +  A ++FD++
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSN---LGSKLSLMYTNCGDLKEASRVFDEV 158

Query: 83  SDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCSVMSMLNVG 142
                  WN ++      G    ++ +F  M+ SG    D YTF  V KS S +  ++ G
Sbjct: 159 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGG 218

Query: 143 VLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWNTMISGWFQN 202
             +HG  L SGF     V NSL+A Y+   +++ AR+VFD M +R V+SWN++I+G+  N
Sbjct: 219 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 278

Query: 203 GRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQKNHLQEKIEVR 262
           G  E+ L+VF +M+ + +E D ATIVSV   C   + + LG  VH +  K     +    
Sbjct: 279 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 338

Query: 263 NALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVV 322
           N L+DMYS+CG +  A  VF E +++ V+++TSMI GY   G A  A+ L   M+ +G+ 
Sbjct: 339 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 398

Query: 323 PNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVVTALIDMYAKCNAVSYSFQV 382
           P+V T+ ++L+ CA    L +GK +H W+    L  D+ V  AL+DMYAKC ++  +  V
Sbjct: 399 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 458

Query: 383 FAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIEE-VEANHATFSSVIPAYAILAD 442
           F++   K  + WN ++ G   N    EA+ LF  +L E+    +  T + V+PA A L+ 
Sbjct: 459 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 518

Query: 443 LKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLI 502
             +   +H Y++R+G+ S   V   L++MY+KCG+L  AH +FD+I +  KD++ W+V+I
Sbjct: 519 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMI 578

Query: 503 AGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACSHRGLVDDGLALFKYMIENHPS 562
           AGYGMHG G+ A+ LFNQM ++G++ +EI+F S+L+ACSH GLVD+G   F  M      
Sbjct: 579 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 638

Query: 563 SPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWGALLGACSIHQNVELGEVAAE 622
            P   HY CIVD+L R G L +AY  I++ P   + +IWGALL  C IH +V+L E  AE
Sbjct: 639 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 698

Query: 623 QLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIGLRKMPAQS 670
           ++FELEPENTG Y+L+ANIYA   +W+  + +R  + + GLRK P  S
Sbjct: 699 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740

[Close]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.9e-119
Identity = 253/690 (36.67%), Postives = 375/690 (54.35%), Query Frame = 0


Query: 32  RSLNKTKILHAHTITSGILHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL--SDPSLFL 91
           +++++ K++H   ++ GIL     ++L SHL  +Y   GC+  A  L      SD  ++ 
Sbjct: 39  KTISQVKLIHQKLLSFGIL----TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 98

Query: 92  WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCSVMSMLNVGVLIHGRA 151
           WN++I+ Y D G     L +F  ++ S    PD YTFP V K+C  +S +  G   H  +
Sbjct: 99  WNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 158

Query: 152 LVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWNTMISGWFQNGRPEEAL 211
           LV+GF SN+FV N+L+AMY  C  +  AR+VFD M    VVSWN++I  + + G+P+ AL
Sbjct: 159 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 218

Query: 212 AVFNRMM-DARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDM 271
            +F+RM  +    PD+ T+V+VLP C  L    LG ++H     + + + + V N LVDM
Sbjct: 219 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 278

Query: 272 YSRCGGMGEASLVFAETNEKDVITWTSM-------------------------------- 331
           Y++CG M EA+ VF+  + KDV++W +M                                
Sbjct: 279 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 338

Query: 332 ---INGYIMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLR 391
              I+GY   G    AL +C  M   G+ PN VTL S+LS CAS+  L  GK +H + ++
Sbjct: 339 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 398

Query: 392 KKLD-------SDVLVVTALIDMYAKCNAVSYSFQVFAKTSKKR--TVPWNALLSGLIHN 451
             +D        + +V+  LIDMYAKC  V  +  +F   S K    V W  ++ G   +
Sbjct: 399 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 458

Query: 452 ELPREAVGLFKSMLIEEVEA--NHATFSSVIPAYAILADLKQVMNLHSYLVRSGFIS-KI 511
               +A+ L   M  E+ +   N  T S  + A A LA L+    +H+Y +R+   +  +
Sbjct: 459 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 518

Query: 512 AVITGLINMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV 571
            V   LI+MY+KCGS+  A  +FD +  K +  + W+ L+ GYGMHG+GE A+ +F++M 
Sbjct: 519 FVSNCLIDMYAKCGSISDARLVFDNMMAKNE--VTWTSLMTGYGMHGYGEEALGIFDEMR 578

Query: 572 RSGMKPNEITFTSVLHACSHRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRL 631
           R G K + +T   VL+ACSH G++D G+  F  M      SP P HY C+VDLLGRAGRL
Sbjct: 579 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 638

Query: 632 DEAYDLIKSTPFQQNHSIWGALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIY 672
           + A  LI+  P +    +W A L  C IH  VELGE AAE++ EL   + G+Y LL+N+Y
Sbjct: 639 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 698

[Close]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot
Match: Q9SS97 (Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E87 PE=3 SV=2)

HSP 1 Score: 423.7 bits (1088), Expect = 3.9e-117
Identity = 225/601 (37.44%), Postives = 355/601 (59.07%), Query Frame = 0


Query: 75  ARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCS 134
           AR++F +++  SL+ WN ++K    +    + L  F  M    +  PD +T P+ +K+C 
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACG 72

Query: 135 VMSMLNVGVLIHGRALVS-GFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWN 194
            +  +N G +IHG         S+++V +SL+ MY+ CG+M  A ++FD +    +V+W+
Sbjct: 73  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 132

Query: 195 TMISGWFQNGRPEEALAVFNRM-MDARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQK 254
           +M+SG+ +NG P +A+  F RM M + V PD  T+++++ +C  L    LG  VH  V +
Sbjct: 133 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 192

Query: 255 NHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMNGNAKSALAL 314
                 + + N+L++ Y++     EA  +F    EKDVI+W+++I  Y+ NG A  AL +
Sbjct: 193 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 252

Query: 315 CPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVVTALIDMYAK 374
              M  DG  PNV T+  +L ACA+   L+QG+  H   +RK L+++V V TAL+DMY K
Sbjct: 253 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 312

Query: 375 CNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE-EVEANHATFSS 434
           C +   ++ VF++  +K  V W AL+SG   N +   ++  F  ML+E     +      
Sbjct: 313 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 372

Query: 435 VIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKIFDEIPNKE 494
           V+ + + L  L+Q    HSY+++ GF S   +   L+ +YS+CGSL  A K+F+ I    
Sbjct: 373 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI--AL 432

Query: 495 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSG-MKPNEITFTSVLHACSHRGLVDDGLA 554
           KD +VW+ LI GYG+HG G  A+  FN MV+S  +KPNE+TF S+L ACSH GL+ +GL 
Sbjct: 433 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 492

Query: 555 LFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWGALLGACSIH 614
           +FK M+ ++  +P   HY  +VDLLGR G LD A ++ K  PF     I G LLGAC IH
Sbjct: 493 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 552

Query: 615 QNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIGLRKMPAQSS 672
           QN E+ E  A++LFELE  + G Y+L++N+Y   G W++ E +R+ + + G++K  A+S 
Sbjct: 553 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 610

[Close]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 5.1e-117
Identity = 242/671 (36.07%), Postives = 369/671 (54.99%), Query Frame = 0


Query: 8   LSKSKPLIANVYRYDS--LLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAVS 67
           LS+   + ANVY + +  LL   ++ + L +   L    +    L+  +F    + L   
Sbjct: 25  LSERNYIPANVYEHPAALLLERCSSLKELRQILPL----VFKNGLYQEHFFQ--TKLVSL 84

Query: 68  YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMY-----VDKGFHFDALRVFDSMICSGKCW 127
           +   G V  A ++F+ +      L++ ++K +     +DK   F     +D +       
Sbjct: 85  FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV------E 144

Query: 128 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 187
           P  Y F  ++K C   + L VG  IHG  + SGFS ++F    L  MY  C ++  AR+V
Sbjct: 145 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 204

Query: 188 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 247
           FD M +R +VSWNT+++G+ QNG    AL +   M +  ++P   TIVSVLP+   L+ +
Sbjct: 205 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 264

Query: 248 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 307
            +G ++H    ++     + +  ALVDMY++CG +  A  +F    E++V++W SMI+ Y
Sbjct: 265 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 324

Query: 308 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 367
           + N N K A+ +   M  +GV P  V++   L ACA L  L++G+ +H   +   LD +V
Sbjct: 325 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 384

Query: 368 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 427
            VV +LI MY KC  V  +  +F K   +  V WNA++ G   N  P +A+  F  M   
Sbjct: 385 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 444

Query: 428 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 487
            V+ +  T+ SVI A A L+       +H  ++RS     + V T L++MY+KCG++  A
Sbjct: 445 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 504

Query: 488 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 547
             IFD +   E+ +  W+ +I GYG HG G+ A+ LF +M +  +KPN +TF SV+ ACS
Sbjct: 505 RLIFDMM--SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 564

Query: 548 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 607
           H GLV+ GL  F  M EN+      +HY  +VDLLGRAGRL+EA+D I   P +   +++
Sbjct: 565 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 624

Query: 608 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 667
           GA+LGAC IH+NV   E AAE+LFEL P++ G ++LLANIY A   W+    VR  M + 
Sbjct: 625 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 681

Query: 668 GLRKMPAQSSV 672
           GLRK P  S V
Sbjct: 685 GLRKTPGCSMV 681

[Close]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL
Match: A0A5A7VJI1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00480 PE=4 SV=1)

HSP 1 Score: 1361.3 bits (3522), Expect = 0.0e+00
Identity = 675/675 (100.00%), Postives = 675/675 (100.00%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS
Sbjct: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW
Sbjct: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV
Sbjct: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL
Sbjct: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY
Sbjct: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV
Sbjct: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA
Sbjct: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI
Sbjct: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRKMPAQSSVGAAV
Sbjct: 661 GLRKMPAQSSVGAAV 675

[Close]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL
Match: A0A1S3CC33 (pentatricopeptide repeat-containing protein At5g39350 OS=Cucumis melo OX=3656 GN=LOC103499128 PE=4 SV=1)

HSP 1 Score: 1361.3 bits (3522), Expect = 0.0e+00
Identity = 675/675 (100.00%), Postives = 675/675 (100.00%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS
Sbjct: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW
Sbjct: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV
Sbjct: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL
Sbjct: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY
Sbjct: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV
Sbjct: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA
Sbjct: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI
Sbjct: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRKMPAQSSVGAAV
Sbjct: 661 GLRKMPAQSSVGAAV 675

[Close]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL
Match: A0A0A0KVP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G102340 PE=4 SV=1)

HSP 1 Score: 1290.0 bits (3337), Expect = 0.0e+00
Identity = 639/675 (94.67%), Postives = 654/675 (96.89%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MN PSQALSKSK LIANV+R DSLL HYAATRSLNKTKILH HTITSG+LHSPNFIHLPS
Sbjct: 1   MNKPSQALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
           HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW
Sbjct: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+ LARQV
Sbjct: 121 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           F+VML RSVVSWNTMISGWFQNGRPEEALAVFN MMDARVEPDSATIVS LPSCG+LKEL
Sbjct: 181 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGM EASLVFAET EKDVITWTSMINGY
Sbjct: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           IMNGNAKSALALCPAMQLDGVVPN VTLASLLSACASLCCLKQGKSLHAWV+RKKLDSDV
Sbjct: 301 IMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTS KRTVPWNALLSGLIHNEL REAVGLFKSMLIE
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIE 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+SVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLI+MYSKCGSLDYA
Sbjct: 421 EVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV SGM+PNEITFTSVLHACS
Sbjct: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGL LFKYMIEN+PSSP PNHYTC+VDLLGRAGRLDEAYDLIKS PFQQNHSIW
Sbjct: 541 HRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGAC IHQNVELGEVAAE+LFELEPE+TGNYILLANIYAA+GRWKDAENVRHIMSKI
Sbjct: 601 GALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKI 660

Query: 661 GLRKMPAQSSVGAAV 676
           GLRK PAQSSVG AV
Sbjct: 661 GLRKTPAQSSVGVAV 675

[Close]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL
Match: A0A6J1GWF0 (pentatricopeptide repeat-containing protein At5g39350 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458039 PE=4 SV=1)

HSP 1 Score: 1190.3 bits (3078), Expect = 0.0e+00
Identity = 586/672 (87.20%), Postives = 629/672 (93.60%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQAL  SKPLIA ++R +SLLR YAA RSL+KTKILHAH ITSGILHS NFI L S
Sbjct: 1   MNGPSQALFNSKPLIAILHRCESLLRRYAAARSLSKTKILHAHAITSGILHSSNFIDLRS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
            LAVSYAFCG VPLARKLFD+LSD SLFLWNAIIKMYVD+G HFDALR+F SMI SGKCW
Sbjct: 61  KLAVSYAFCGYVPLARKLFDELSDRSLFLWNAIIKMYVDRGLHFDALRMFYSMINSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CS MSML+VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+ELAR V
Sbjct: 121 PDKYTFPLVIKACSEMSMLDVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKLELARWV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVM +RSVVSWNTMISGWFQNG+PEEAL VFNRMMDARVEPDSAT+VSVLP+CGYLKEL
Sbjct: 181 FDVMPERSVVSWNTMISGWFQNGQPEEALVVFNRMMDARVEPDSATMVSVLPTCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELG KVHKLV+ NHL E+IEVRNAL+DMYSRCG M EASLVF+ET E+DVITWTSMINGY
Sbjct: 241 ELGRKVHKLVENNHLHERIEVRNALIDMYSRCGCMDEASLVFSETKERDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           I+NGN KSALALCPAMQLDGV PN VTLASLLSACASLCCLKQGKSLHAWV+R+KLDSDV
Sbjct: 301 IINGNPKSALALCPAMQLDGVAPNAVTLASLLSACASLCCLKQGKSLHAWVMRQKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHN L REAV LFK+ML+E
Sbjct: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNGLAREAVELFKTMLME 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+S+IPAYAILADLKQVMNLHSYLVRSGFIS+IAV+TGLI++YSKCG LDYA
Sbjct: 421 EVEANHATFNSLIPAYAILADLKQVMNLHSYLVRSGFISRIAVVTGLIDIYSKCGCLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFD+I N++KDIIVWSV+IAGYGMHGHGE AV LFNQMV+SG+ PNEITFTSVLHACS
Sbjct: 481 HKIFDDIRNEDKDIIVWSVVIAGYGMHGHGEIAVSLFNQMVQSGVSPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPS PRPNHYTCIVDLLGRAGRLDEAYD+IKS PF+ NHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSRPRPNHYTCIVDLLGRAGRLDEAYDIIKSMPFKHNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQN+ELGEVAAE+LF+LE ENTGNYILLANIYAA+GRWKDAE VRH+MS I
Sbjct: 601 GALLGACSIHQNIELGEVAAERLFDLESENTGNYILLANIYAAVGRWKDAEKVRHMMSNI 660

Query: 661 GLRKMPAQSSVG 673
           GLRKMPAQSSVG
Sbjct: 661 GLRKMPAQSSVG 672

[Close]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL
Match: A0A6J1IZL3 (pentatricopeptide repeat-containing protein At5g39350 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479890 PE=4 SV=1)

HSP 1 Score: 1188.7 bits (3074), Expect = 0.0e+00
Identity = 587/672 (87.35%), Postives = 628/672 (93.45%), Query Frame = 0


Query: 1   MNGPSQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPS 60
           MNGPSQAL  SKPLIA V+R +SLLR YAA RSL+KTKILHAH ITSGILHS NFI L S
Sbjct: 1   MNGPSQALFNSKPLIAIVHRCESLLRRYAAARSLSKTKILHAHAITSGILHSSNFIDLQS 60

Query: 61  HLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCW 120
            LAVSYAFCG VPLARKLFD+LSD SLFLWNAIIKMYVD+G HFDALR+F SMI SGKCW
Sbjct: 61  KLAVSYAFCGYVPLARKLFDELSDRSLFLWNAIIKMYVDRGLHFDALRMFYSMINSGKCW 120

Query: 121 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 180
           PDKYTFPLVIK+CS MSML+VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK+ELAR V
Sbjct: 121 PDKYTFPLVIKACSEMSMLDVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKLELARWV 180

Query: 181 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 240
           FDVM +RSVVSWNTMISGWFQNG+PEEAL VFNRMM ARVEPDSAT+VSVLP+CGYLKEL
Sbjct: 181 FDVMPERSVVSWNTMISGWFQNGQPEEALVVFNRMMYARVEPDSATMVSVLPTCGYLKEL 240

Query: 241 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 300
           ELG KVHKLV+ NHL E+IEVRNAL+DMYSRCG M EASLVF+ET E+DVITWTSMINGY
Sbjct: 241 ELGRKVHKLVENNHLHERIEVRNALIDMYSRCGCMDEASLVFSETKERDVITWTSMINGY 300

Query: 301 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 360
           I+NGN KSALALCPAMQLDGV PN VTLASLLSACASLCCLKQGKSLHAWV+R+KLDSDV
Sbjct: 301 IINGNPKSALALCPAMQLDGVAPNAVTLASLLSACASLCCLKQGKSLHAWVMRQKLDSDV 360

Query: 361 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 420
           LVVTALIDMYAKCNA+SYSFQVFAKTSKKRTVPWNALLSGLIHN L REAV LFK+ML+E
Sbjct: 361 LVVTALIDMYAKCNAMSYSFQVFAKTSKKRTVPWNALLSGLIHNGLAREAVELFKTMLME 420

Query: 421 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 480
           EVEANHATF+S+IPAYAILADLKQVMNLHSYLVRSGFIS+IAV+TGLI++YSKCG LDYA
Sbjct: 421 EVEANHATFNSLIPAYAILADLKQVMNLHSYLVRSGFISRIAVVTGLIDIYSKCGCLDYA 480

Query: 481 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 540
           HKIFD+I N++KDIIVWSV+IAGYGMHGHGE AV LFNQMV+SG+ PNEITFTSVLHACS
Sbjct: 481 HKIFDDIRNEDKDIIVWSVVIAGYGMHGHGEIAVSLFNQMVQSGVSPNEITFTSVLHACS 540

Query: 541 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 600
           HRGLVDDGLALFKYMIENHPS PRPNHYTCIVDLLGRAGRLDEAYD+IKS PF+ NHSIW
Sbjct: 541 HRGLVDDGLALFKYMIENHPSRPRPNHYTCIVDLLGRAGRLDEAYDIIKSMPFKHNHSIW 600

Query: 601 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 660
           GALLGACSIHQNVELGEVAAE+LFELE ENTGNYILLANIYAA+GRWKDAE VRH+MS I
Sbjct: 601 GALLGACSIHQNVELGEVAAERLFELESENTGNYILLANIYAAVGRWKDAEKVRHMMSNI 660

Query: 661 GLRKMPAQSSVG 673
           GLRKMPAQSSVG
Sbjct: 661 GLRKMPAQSSVG 672

[Close]

BLAST of Cmc07g0193821 vs. TAIR 10
Match: AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 755.7 bits (1950), Expect = 3.1e-218
Identity = 360/670 (53.73%), Postives = 495/670 (73.88%), Query Frame = 0


Query: 5   SQALSKSKPLIANVYRYDSLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAV 64
           S+ L ++   +++V +Y SLL H+AAT+S++KTK LH H IT G +      H+ S L+V
Sbjct: 2   SEVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG----HILSTLSV 61

Query: 65  SYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSG-KCWPDK 124
           +YA CG +  ARKLF+++   SL  +N +I+MYV +G + DA+ VF  M+  G KC PD 
Sbjct: 62  TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 121

Query: 125 YTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDV 184
           YT+P V K+   +  + +G+++HGR L S F  + +VQN+LLAMYMN GK+E+AR VFDV
Sbjct: 122 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 181

Query: 185 MLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKELELG 244
           M +R V+SWNTMISG+++NG   +AL +F+ M++  V+ D ATIVS+LP CG+LK+LE+G
Sbjct: 182 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 241

Query: 245 IKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMN 304
             VHKLV++  L +KIEV+NALV+MY +CG M EA  VF     +DVITWT MINGY  +
Sbjct: 242 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 301

Query: 305 GNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVV 364
           G+ ++AL LC  MQ +GV PN VT+ASL+S C     +  GK LH W +R+++ SD+++ 
Sbjct: 302 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 361

Query: 365 TALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIEEVE 424
           T+LI MYAKC  V   F+VF+  SK  T PW+A+++G + NEL  +A+GLFK M  E+VE
Sbjct: 362 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 421

Query: 425 ANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKI 484
            N AT +S++PAYA LADL+Q MN+H YL ++GF+S +   TGL+++YSKCG+L+ AHKI
Sbjct: 422 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 481

Query: 485 FDEI--PNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACSH 544
           F+ I   +K KD+++W  LI+GYGMHG G  A+ +F +MVRSG+ PNEITFTS L+ACSH
Sbjct: 482 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 541

Query: 545 RGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWG 604
            GLV++GL LF++M+E++ +  R NHYTCIVDLLGRAGRLDEAY+LI + PF+   ++WG
Sbjct: 542 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 601

Query: 605 ALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIG 664
           ALL AC  H+NV+LGE+AA +LFELEPENTGNY+LLANIYAA+GRWKD E VR +M  +G
Sbjct: 602 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVG 661

Query: 665 LRKMPAQSSV 672
           LRK P  S++
Sbjct: 662 LRKKPGHSTI 667

[Close]

BLAST of Cmc07g0193821 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 469.2 bits (1206), Expect = 5.7e-132
Identity = 252/648 (38.89%), Postives = 382/648 (58.95%), Query Frame = 0


Query: 23  SLLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL 82
           S+L+  A ++SL   K +      +G +   N   L S L++ Y  CG +  A ++FD++
Sbjct: 99  SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSN---LGSKLSLMYTNCGDLKEASRVFDEV 158

Query: 83  SDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCSVMSMLNVG 142
                  WN ++      G    ++ +F  M+ SG    D YTF  V KS S +  ++ G
Sbjct: 159 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLRSVHGG 218

Query: 143 VLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWNTMISGWFQN 202
             +HG  L SGF     V NSL+A Y+   +++ AR+VFD M +R V+SWN++I+G+  N
Sbjct: 219 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 278

Query: 203 GRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQKNHLQEKIEVR 262
           G  E+ L+VF +M+ + +E D ATIVSV   C   + + LG  VH +  K     +    
Sbjct: 279 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 338

Query: 263 NALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVV 322
           N L+DMYS+CG +  A  VF E +++ V+++TSMI GY   G A  A+ L   M+ +G+ 
Sbjct: 339 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 398

Query: 323 PNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVVTALIDMYAKCNAVSYSFQV 382
           P+V T+ ++L+ CA    L +GK +H W+    L  D+ V  AL+DMYAKC ++  +  V
Sbjct: 399 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 458

Query: 383 FAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIEE-VEANHATFSSVIPAYAILAD 442
           F++   K  + WN ++ G   N    EA+ LF  +L E+    +  T + V+PA A L+ 
Sbjct: 459 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 518

Query: 443 LKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLI 502
             +   +H Y++R+G+ S   V   L++MY+KCG+L  AH +FD+I +  KD++ W+V+I
Sbjct: 519 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMI 578

Query: 503 AGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACSHRGLVDDGLALFKYMIENHPS 562
           AGYGMHG G+ A+ LFNQM ++G++ +EI+F S+L+ACSH GLVD+G   F  M      
Sbjct: 579 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 638

Query: 563 SPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWGALLGACSIHQNVELGEVAAE 622
            P   HY CIVD+L R G L +AY  I++ P   + +IWGALL  C IH +V+L E  AE
Sbjct: 639 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 698

Query: 623 QLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIGLRKMPAQS 670
           ++FELEPENTG Y+L+ANIYA   +W+  + +R  + + GLRK P  S
Sbjct: 699 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740

[Close]

BLAST of Cmc07g0193821 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 431.4 bits (1108), Expect = 1.3e-120
Identity = 253/690 (36.67%), Postives = 375/690 (54.35%), Query Frame = 0


Query: 32  RSLNKTKILHAHTITSGILHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDL--SDPSLFL 91
           +++++ K++H   ++ GIL     ++L SHL  +Y   GC+  A  L      SD  ++ 
Sbjct: 39  KTISQVKLIHQKLLSFGIL----TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYH 98

Query: 92  WNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCSVMSMLNVGVLIHGRA 151
           WN++I+ Y D G     L +F  ++ S    PD YTFP V K+C  +S +  G   H  +
Sbjct: 99  WNSLIRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 158

Query: 152 LVSGFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWNTMISGWFQNGRPEEAL 211
           LV+GF SN+FV N+L+AMY  C  +  AR+VFD M    VVSWN++I  + + G+P+ AL
Sbjct: 159 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 218

Query: 212 AVFNRMM-DARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDM 271
            +F+RM  +    PD+ T+V+VLP C  L    LG ++H     + + + + V N LVDM
Sbjct: 219 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 278

Query: 272 YSRCGGMGEASLVFAETNEKDVITWTSM-------------------------------- 331
           Y++CG M EA+ VF+  + KDV++W +M                                
Sbjct: 279 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 338

Query: 332 ---INGYIMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLR 391
              I+GY   G    AL +C  M   G+ PN VTL S+LS CAS+  L  GK +H + ++
Sbjct: 339 SAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK 398

Query: 392 KKLD-------SDVLVVTALIDMYAKCNAVSYSFQVFAKTSKKR--TVPWNALLSGLIHN 451
             +D        + +V+  LIDMYAKC  V  +  +F   S K    V W  ++ G   +
Sbjct: 399 YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 458

Query: 452 ELPREAVGLFKSMLIEEVEA--NHATFSSVIPAYAILADLKQVMNLHSYLVRSGFIS-KI 511
               +A+ L   M  E+ +   N  T S  + A A LA L+    +H+Y +R+   +  +
Sbjct: 459 GDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL 518

Query: 512 AVITGLINMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV 571
            V   LI+MY+KCGS+  A  +FD +  K +  + W+ L+ GYGMHG+GE A+ +F++M 
Sbjct: 519 FVSNCLIDMYAKCGSISDARLVFDNMMAKNE--VTWTSLMTGYGMHGYGEEALGIFDEMR 578

Query: 572 RSGMKPNEITFTSVLHACSHRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRL 631
           R G K + +T   VL+ACSH G++D G+  F  M      SP P HY C+VDLLGRAGRL
Sbjct: 579 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 638

Query: 632 DEAYDLIKSTPFQQNHSIWGALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIY 672
           + A  LI+  P +    +W A L  C IH  VELGE AAE++ EL   + G+Y LL+N+Y
Sbjct: 639 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 698

[Close]

BLAST of Cmc07g0193821 vs. TAIR 10
Match: AT3G01580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 2.8e-118
Identity = 225/601 (37.44%), Postives = 355/601 (59.07%), Query Frame = 0


Query: 75  ARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKSCS 134
           AR++F +++  SL+ WN ++K    +    + L  F  M    +  PD +T P+ +K+C 
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACG 72

Query: 135 VMSMLNVGVLIHGRALVS-GFSSNMFVQNSLLAMYMNCGKMELARQVFDVMLDRSVVSWN 194
            +  +N G +IHG         S+++V +SL+ MY+ CG+M  A ++FD +    +V+W+
Sbjct: 73  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 132

Query: 195 TMISGWFQNGRPEEALAVFNRM-MDARVEPDSATIVSVLPSCGYLKELELGIKVHKLVQK 254
           +M+SG+ +NG P +A+  F RM M + V PD  T+++++ +C  L    LG  VH  V +
Sbjct: 133 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 192

Query: 255 NHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGYIMNGNAKSALAL 314
                 + + N+L++ Y++     EA  +F    EKDVI+W+++I  Y+ NG A  AL +
Sbjct: 193 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 252

Query: 315 CPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDVLVVTALIDMYAK 374
              M  DG  PNV T+  +L ACA+   L+QG+  H   +RK L+++V V TAL+DMY K
Sbjct: 253 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 312

Query: 375 CNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE-EVEANHATFSS 434
           C +   ++ VF++  +K  V W AL+SG   N +   ++  F  ML+E     +      
Sbjct: 313 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 372

Query: 435 VIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYAHKIFDEIPNKE 494
           V+ + + L  L+Q    HSY+++ GF S   +   L+ +YS+CGSL  A K+F+ I    
Sbjct: 373 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI--AL 432

Query: 495 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSG-MKPNEITFTSVLHACSHRGLVDDGLA 554
           KD +VW+ LI GYG+HG G  A+  FN MV+S  +KPNE+TF S+L ACSH GL+ +GL 
Sbjct: 433 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 492

Query: 555 LFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIWGALLGACSIH 614
           +FK M+ ++  +P   HY  +VDLLGR G LD A ++ K  PF     I G LLGAC IH
Sbjct: 493 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 552

Query: 615 QNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKIGLRKMPAQSS 672
           QN E+ E  A++LFELE  + G Y+L++N+Y   G W++ E +R+ + + G++K  A+S 
Sbjct: 553 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 610

[Close]

BLAST of Cmc07g0193821 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 423.3 bits (1087), Expect = 3.6e-118
Identity = 242/671 (36.07%), Postives = 369/671 (54.99%), Query Frame = 0


Query: 8   LSKSKPLIANVYRYDS--LLRHYAATRSLNKTKILHAHTITSGILHSPNFIHLPSHLAVS 67
           LS+   + ANVY + +  LL   ++ + L +   L    +    L+  +F    + L   
Sbjct: 25  LSERNYIPANVYEHPAALLLERCSSLKELRQILPL----VFKNGLYQEHFFQ--TKLVSL 84

Query: 68  YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMY-----VDKGFHFDALRVFDSMICSGKCW 127
           +   G V  A ++F+ +      L++ ++K +     +DK   F     +D +       
Sbjct: 85  FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV------E 144

Query: 128 PDKYTFPLVIKSCSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKMELARQV 187
           P  Y F  ++K C   + L VG  IHG  + SGFS ++F    L  MY  C ++  AR+V
Sbjct: 145 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 204

Query: 188 FDVMLDRSVVSWNTMISGWFQNGRPEEALAVFNRMMDARVEPDSATIVSVLPSCGYLKEL 247
           FD M +R +VSWNT+++G+ QNG    AL +   M +  ++P   TIVSVLP+   L+ +
Sbjct: 205 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 264

Query: 248 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMGEASLVFAETNEKDVITWTSMINGY 307
            +G ++H    ++     + +  ALVDMY++CG +  A  +F    E++V++W SMI+ Y
Sbjct: 265 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 324

Query: 308 IMNGNAKSALALCPAMQLDGVVPNVVTLASLLSACASLCCLKQGKSLHAWVLRKKLDSDV 367
           + N N K A+ +   M  +GV P  V++   L ACA L  L++G+ +H   +   LD +V
Sbjct: 325 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 384

Query: 368 LVVTALIDMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELPREAVGLFKSMLIE 427
            VV +LI MY KC  V  +  +F K   +  V WNA++ G   N  P +A+  F  M   
Sbjct: 385 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 444

Query: 428 EVEANHATFSSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLINMYSKCGSLDYA 487
            V+ +  T+ SVI A A L+       +H  ++RS     + V T L++MY+KCG++  A
Sbjct: 445 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 504

Query: 488 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVRSGMKPNEITFTSVLHACS 547
             IFD +   E+ +  W+ +I GYG HG G+ A+ LF +M +  +KPN +TF SV+ ACS
Sbjct: 505 RLIFDMM--SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 564

Query: 548 HRGLVDDGLALFKYMIENHPSSPRPNHYTCIVDLLGRAGRLDEAYDLIKSTPFQQNHSIW 607
           H GLV+ GL  F  M EN+      +HY  +VDLLGRAGRL+EA+D I   P +   +++
Sbjct: 565 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 624

Query: 608 GALLGACSIHQNVELGEVAAEQLFELEPENTGNYILLANIYAAIGRWKDAENVRHIMSKI 667
           GA+LGAC IH+NV   E AAE+LFEL P++ G ++LLANIY A   W+    VR  M + 
Sbjct: 625 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 681

Query: 668 GLRKMPAQSSV 672
           GLRK P  S V
Sbjct: 685 GLRKTPGCSMV 681

The following BLAST results are available for this feature:

BLAST of Cmc07g0193821 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460253.1	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Cucumis melo] ...	[more]
XP_011653372.1	0.0e+00	94.67	pentatricopeptide repeat-containing protein At5g39350 [Cucumis sativus] >KGN5368...	[more]
XP_038905919.1	0.0e+00	91.26	pentatricopeptide repeat-containing protein At5g39350 [Benincasa hispida]	[more]
KAG6581699.1	0.0e+00	87.35	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022956303.1	0.0e+00	87.20	pentatricopeptide repeat-containing protein At5g39350 isoform X1 [Cucurbita mosc...	[more]

BLAST of Cmc07g0193821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLZ9	4.3e-217	53.73	Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX...	[more]
Q9SN39	8.1e-131	38.89	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LFL5	1.9e-119	36.67	Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX...	[more]
Q9SS97	3.9e-117	37.44	Putative pentatricopeptide repeat-containing protein At3g01580 OS=Arabidopsis th...	[more]
Q3E6Q1	5.1e-117	36.07	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]

BLAST of Cmc07g0193821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VJI1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CC33	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g39350 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KVP5	0.0e+00	94.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G102340 PE=4 SV=1	[more]
A0A6J1GWF0	0.0e+00	87.20	pentatricopeptide repeat-containing protein At5g39350 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1IZL3	0.0e+00	87.35	pentatricopeptide repeat-containing protein At5g39350 isoform X1 OS=Cucurbita ma...	[more]

BLAST of Cmc07g0193821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39350.1	3.1e-218	53.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	5.7e-132	38.89	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G16860.1	1.3e-120	36.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G01580.1	2.8e-118	37.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	3.6e-118	36.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 530..558 e-value: 3.5E-4 score: 18.6 coord: 89..118 e-value: 6.4E-4 score: 17.7 coord: 190..224 e-value: 1.9E-10 score: 38.2 coord: 496..529 e-value: 4.3E-7 score: 27.7 coord: 291..325 e-value: 3.4E-4 score: 18.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 568..589 e-value: 0.11 score: 12.8 coord: 89..117 e-value: 8.8E-4 score: 19.4 coord: 466..488 e-value: 0.057 score: 13.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 288..336 e-value: 1.4E-8 score: 34.7 coord: 391..436 e-value: 1.8E-7 score: 31.2 coord: 492..540 e-value: 8.8E-12 score: 45.0 coord: 188..232 e-value: 2.0E-11 score: 43.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 289..323 score: 10.39137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 188..222 score: 12.83574
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 528..562 score: 9.251395
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 493..527 score: 11.345003
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 468..669 e-value: 2.1E-35 score: 124.6 coord: 234..339 e-value: 4.8E-19 score: 70.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 340..457 e-value: 3.4E-16 score: 61.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 144..233 e-value: 2.0E-22 score: 81.4 coord: 6..143 e-value: 3.6E-11 score: 44.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 543..651
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 142..669 coord: 22..138
None	No IPR available	PANTHER	PTHR47926:SF187	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 142..669
None	No IPR available	PANTHER	PTHR47926:SF187	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 22..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193821.1	Cmc07g0193821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding