Cmc03g0062771 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTTTCCAACACGGTGTCAATCTATAATTTATAATGGATGAACATAAGTTTTGCATCTCTTATAATTGCGTTCATAACATCCCAACGTTAGTTGCTACTAATGTTGGAGTTTTTAATTAATGACACGAAGAGGATACCGCATATCCTGCATGACACTAGCCATAGGATCAGACAGTTAGCCTATTTTCGCATGATTCATGCCTCAAACCTTGTGTGTCAGCAAAGTACGAGAATGGATCGAAGATGTTTCGCCATTCTATGCCACCTATTGAGGACCATTACTGAACTAACGTAGACAGAAGTTGTCAATGTTGAAGAGATGGTCGCAATGTTCCTCCACATACTCGCGCACGATGTGAAAAACTGTGTCATTCACCAAGAGTTCATACGATCGGGTGAGACAATTTCCCATTATTTCAACATGGTGTTACTGGCAGTAATTCGACTGTATGACGAGCTCTTGAAAAAACTACAACTAGTGCCGAATGGTTGCACATATCAACTATGTACTTCCAACCATCCGATGTAAGACCTTGTCATTAATCATTAGTTATGCGTTGCAGAATTTCCTTGGTGCATTAGATGGGATGTATATCAAAGTCGACATTCCAACAAGTGAGCAGGCTAAGTATAGAACACACAAGGGAGAGGTGGCCACAAATGTCCTTGGTGTGTGTGACATGAAAGGAGATTTCATTTATGTACTTGTCGGTTGGGAAAGATCAATTGCGAACTCATGCATCCTTCGAGATACCATTTCAAGGCTTAATGGCCTGAAAGTGCCCAAGGATAACTACCTATGGCACTGTATGTAGAAATACAATTTATCAATTAACAGCTGCGACATTTTAATCGCTCAATGTGATCACAAGAGATGTCCACGGGGCGGCATAAGGCCGGGGATGCCACTCCCTGTCCCCGTCCCTACCTCCTATTCCATTCCCCATCCCCATCAATTTCCACGTGGGGAACGGGGCGGGGATTCTCCATGGGGATTCCACGGGGATTGGGTTCCT TTCTTTTCCAACACGGTGTCAATCTATAATTTATAATGGATGAACATAAGTTTTGCATCTCTTATAATTGCGTTCATAACATCCCAACGTTAGTTGCTACTAATGTTGGAGTTTTTAATTAATGACACGAAGAGGATACCGCATATCCTGCATGACACTAGCCATAGGATCAGACAGTTAGCCTATTTTCGCATGATTCATGCCTCAAACCTTGTGTGTCAGCAAAGTACGAGAATGGATCGAAGATGTTTCGCCATTCTATGCCACCTATTGAGGACCATTACTGAACTAACGTAGACAGAAGTTGTCAATGTTGAAGAGATGGTCGCAATGTTCCTCCACATACTCGCGCACGATGTGAAAAACTGTGTCATTCACCAAGAGTTCATACGATCGGAATTTCCTTGGTGCATTAGATGGGATGTATATCAAAGTCGACATTCCAACAAGTGAGCAGGCTAAGTATAGAACACACAAGGGAGAGGTGGCCACAAATGTCCTTGGTGTGTGTGACATGAAAGGAGATTTCATTTATGTACTTGTCGGTTGGGAAAGATCAATTGCGAACTCATGCATCCTTCGAGATACCATTTCAAGGCTTAATGGCCTGAAAGTGCCCAAGGATAACTACCTATGGCACTGTATGTAGAAATACAATTTATCAATTAACAGCTGCGACATTTTAATCGCTCAATGTGATCACAAGAGATGTCCACGGGGCGGCATAAGGCCGGGGATGCCACTCCCTGTCCCCGTCCCTACCTCCTATTCCATTCCCCATCCCCATCAATTTCCACGTGGGGAACGGGGCGGGGATTCTCCATGGGGATTCCACGGGGATTGGGTTCCT ATGTATATCAAAGTCGACATTCCAACAAGTGAGCAGGCTAAGTATAGAACACACAAGGGAGAGGTGGCCACAAATGTCCTTGGTGTGTGTGACATGAAAGGAGATTTCATTTATGTACTTGTCGGTTGGGAAAGATCAATTGCGAACTCATGCATCCTTCGAGATACCATTTCAAGGCTTAATGGCCTGAAAGTGCCCAAGGATAACTACCTATGGCACTGTATGTAG MYIKVDIPTSEQAKYRTHKGEVATNVLGVCDMKGDFIYVLVGWERSIANSCILRDTISRLNGLKVPKDNYLWHCM Homology
BLAST of Cmc03g0062771 vs. NCBI nr
Match: KAA0064261.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK18630.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22 Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Cmc03g0062771 vs. NCBI nr
Match: KAA0025494.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22 Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Cmc03g0062771 vs. NCBI nr
Match: KAA0055437.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK08919.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 5.6e-22 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Cmc03g0062771 vs. NCBI nr
Match: TYK19875.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21 Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Cmc03g0062771 vs. NCBI nr
Match: TYK02751.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Cmc03g0062771 vs. ExPASy TrEMBL
Match: A0A5D3D546 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001680 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 9.3e-23 Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Cmc03g0062771 vs. ExPASy TrEMBL
Match: A0A5A7SIN0 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G001010 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 9.3e-23 Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Cmc03g0062771 vs. ExPASy TrEMBL
Match: A0A5A7ULI4 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00070 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 0
BLAST of Cmc03g0062771 vs. ExPASy TrEMBL
Match: A0A5D3BSN2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00050 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 50/69 (72.46%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of Cmc03g0062771 vs. ExPASy TrEMBL
Match: A0A5D3D8F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00900 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21 Identity = 51/73 (69.86%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Cmc03g0062771 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.1e-07 Identity = 22/64 (34.38%), Postives = 39/64 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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