MELO3C004688.1 (mRNA) Melon (DHL92) v4

Overview


Name	MELO3C004688.1
Type	mRNA
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Germin-like protein
Location	chr12: 12195912 .. 12196544 (-)
Sequence length	633
RNA-Seq Expression	MELO3C004688.1
Synteny	MELO3C004688.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCCTCTCTACAAAACCAGCCACATTTTTCTTCTTCTTCTTCTTCATTCTAAGCATCTTCTCCTTTGCCAAATCCGGCGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGGGGCCATCATCAACAGCACTTTCTTCACCTTTACAGGCCTTCGCTCAGCTTTCACCGATTTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCAACGAGTTCCCAGCGCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCACACTCACCCTCGCTCTGCTGAGCTCCTCCTTGTCGTCAGTGGCAGCCTCCAGGTTGGCTTCGTCGATACCAGCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGATTGGTCCATTTCCAGTTCAATGCTGACCCTCAAAACTCTGCCACGGCCATCGCCACCTTTGCCAGTGCTAACGCTGGCACTGTGTCGTTGCCGTCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAAACTGATGTGGCTATTATTCAAAGTATAAAGACTGGCCTTACACCACCAAAGAGTTAG

mRNA sequence

ATGGCTTTCCTCTCTACAAAACCAGCCACATTTTTCTTCTTCTTCTTCTTCATTCTAAGCATCTTCTCCTTTGCCAAATCCGGCGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGGGGCCATCATCAACAGCACTTTCTTCACCTTTACAGGCCTTCGCTCAGCTTTCACCGATTTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCAACGAGTTCCCAGCGCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCACACTCACCCTCGCTCTGCTGAGCTCCTCCTTGTCGTCAGTGGCAGCCTCCAGGTTGGCTTCGTCGATACCAGCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGATTGGTCCATTTCCAGTTCAATGCTGACCCTCAAAACTCTGCCACGGCCATCGCCACCTTTGCCAGTGCTAACGCTGGCACTGTGTCGTTGCCGTCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAAACTGATGTGGCTATTATTCAAAGTATAAAGACTGGCCTTACACCACCAAAGAGTTAG

Coding sequence (CDS)

ATGGCTTTCCTCTCTACAAAACCAGCCACATTTTTCTTCTTCTTCTTCTTCATTCTAAGCATCTTCTCCTTTGCCAAATCCGGCGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGGGGCCATCATCAACAGCACTTTCTTCACCTTTACAGGCCTTCGCTCAGCTTTCACCGATTTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCAACGAGTTCCCAGCGCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCACACTCACCCTCGCTCTGCTGAGCTCCTCCTTGTCGTCAGTGGCAGCCTCCAGGTTGGCTTCGTCGATACCAGCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGATTGGTCCATTTCCAGTTCAATGCTGACCCTCAAAACTCTGCCACGGCCATCGCCACCTTTGCCAGTGCTAACGCTGGCACTGTGTCGTTGCCGTCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAAACTGATGTGGCTATTATTCAAAGTATAAAGACTGGCCTTACACCACCAAAGAGTTAG

Protein sequence

MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAFKTDVAIIQSIKTGLTPPKS

Homology

[Close]

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot
Match: Q652P9 (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-49
Identity = 108/192 (56.25%), Postives = 133/192 (69.27%), Query Frame = 0


Query: 27  SGDPDPVVDYLTSPLGA---IINSTFFTFTGLRSAFT---DFP---PNFKPTKATFNEFP 86
           +GDPD + DY+  P G+    I   FFTFTG R+  +     P    NF  TKAT  EFP
Sbjct: 23  AGDPDILTDYVI-PAGSNAENITGDFFTFTGFRNPLSMNMSMPMPNANFTVTKATMAEFP 82

Query: 87  ALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDL 146
           AL  QSVS A+L YP  ++NPPHTHPRSAELLL+V G+L VGFVDT+N+ + Q L  GD+
Sbjct: 83  ALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTTNKLYTQDLAAGDM 142

Query: 147 FLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAFKTDVAI 206
           F+FPKG+VHFQFN+  Q  A A++ F SA AG VS+P TVF + I D VLA++FKTDV  
Sbjct: 143 FVFPKGMVHFQFNSGNQ-PAMALSAFGSAAAGLVSVPVTVFGTNIDDAVLAKSFKTDVPT 202

Query: 207 IQSIKTGLTPPK 210
           IQ +K GLTPPK
Sbjct: 203 IQKLKAGLTPPK 212

[Close]

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot
Match: Q652Q0 (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-46
Identity = 104/209 (49.76%), Postives = 136/209 (65.07%), Query Frame = 0


Query: 10  TFFFFFFFILSIF----SFAKSGDPDPVVDYLTSPLGAIINST--FFTFTGLRSAFTDF- 69
           +++     +L+++    +   +GDPD + DY+    G  +N T  FFTFTG R  F    
Sbjct: 4   SYYSLLLLLLAVWAPALTLVMAGDPDILTDYVIPANGNPMNITGDFFTFTGFRKVFNTSS 63

Query: 70  ---PPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVG 129
              P +F  TKAT  EFPAL  QSVS A L +P  ++NPPHTHPRSAELLLVV G+L VG
Sbjct: 64  APEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVG 123

Query: 130 FVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFT 189
           F+DT+N+ + Q L  GD+F+FPKG+VHFQFN+  Q  A A++ F SA  G V +P TVF 
Sbjct: 124 FIDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQ-PAMALSAFGSAAPGVVPVPVTVFG 183

Query: 190 SGISDEVLAEAFKTDVAIIQSIKTGLTPP 209
           +GI D VLA++FKTDV  I  +K  LTPP
Sbjct: 184 TGIDDAVLAKSFKTDVPTILKLKANLTPP 211

[Close]

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot
Match: Q652Q1 (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-39
Identity = 90/197 (45.69%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 18  ILSIFSFAKSGDPDPVVDYL----TSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATF 77
           +L++   A + DPD + D++    T P G  I+  FFT+  L +  +  P     TKAT 
Sbjct: 16  LLAVILSAGAADPDILTDFVVPSDTDPSG--IDGAFFTYKNLVTGNSGDPAKLTVTKATH 75

Query: 78  NEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQ--FFNQT 137
            EFPALL QSVS A L + AG++NPPH HPR++ELL+VV G L VG VD +     + QT
Sbjct: 76  AEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQT 135

Query: 138 LQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAF 197
           LQ GD+F+FPKG+VHFQFN      A A + F SA  GT+SLP+ +F SGI D +L ++ 
Sbjct: 136 LQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGSGIDDTILDKSM 195

Query: 198 KTDVAIIQSIKTGLTPP 209
            TD A +  +K    PP
Sbjct: 196 HTDQATVDQLKQDQAPP 210

[Close]

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot
Match: Q7F731 (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=GER4 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 72/199 (36.18%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 18  ILSIFSFAKSGDPDPVVDYLTS-----------PLGAIINSTFFTFTGLRS-AFTDFPPN 77
           +L++ + + +GDPD + D   +           P  A + +  F F GL++   T+ P  
Sbjct: 15  VLALAAPSLAGDPDMLQDVCVADLASPVKLNGFPCKANVTADDFFFAGLKNPGNTNNPAG 74

Query: 78  FKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSN 137
              T A    FP + +  VSMA + Y  G  NPPHTHPR+ E++ V+ G L+VGF+ T+N
Sbjct: 75  SNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTAN 134

Query: 138 QFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSG--IS 197
           + F +T+  G++F+FP+GLVHFQ N      A  IA F S   GT ++ +T+F +   + 
Sbjct: 135 KLFTKTVTAGEVFVFPRGLVHFQQNRG-HGPAAVIAAFNSQLQGTQAIAATLFAAAPPVP 194

Query: 198 DEVLAEAFKTDVAIIQSIK 203
            +VLA+AF+ DV  + +IK
Sbjct: 195 SDVLAKAFRVDVPQVDAIK 212

[Close]

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.4e-25
Identity = 75/215 (34.88%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 12  FFFFFFILSIFSFAKSGDPDPVVD--------------YLTSPLGAIINSTFFTFTGL-R 71
           F FFF +LS+     + DPD + D              +   P   I  S FF F G+ +
Sbjct: 6   FGFFFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFF-FAGIGK 65

Query: 72  SAFTDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSL 131
            A  +       T A   +   L +  VS+A + Y  G +NPPHTHPR+ E++ V+ G L
Sbjct: 66  PAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGEL 125

Query: 132 QVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPST 191
            VGF+ T+N+ F +T++ G++F+FP+GL+H+Q N D    A+ I+ F S   GT S+ +T
Sbjct: 126 DVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAAT 185

Query: 192 VFTS--GISDEVLAEAFKTDVAIIQSIKTGLTPPK 210
           +FT+   I D VL   F+     I+ IK+   P K
Sbjct: 186 LFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219

[Close]

BLAST of MELO3C004688.1 vs. NCBI nr
Match: XP_008463986.1 (PREDICTED: germin-like protein 9-3 [Cucumis melo] >KAA0035508.1 germin-like protein 9-3 [Cucumis melo var. makuwa] >TYK31021.1 germin-like protein 9-3 [Cucumis melo var. makuwa])

HSP 1 Score: 407.9 bits (1047), Expect = 5.2e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60
           MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT
Sbjct: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60

Query: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120
           DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF
Sbjct: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120

Query: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180
           VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS
Sbjct: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180

Query: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 211
           GISDEVLAEAFKTDVAIIQSIKTGLTPPKS
Sbjct: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 210

[Close]

BLAST of MELO3C004688.1 vs. NCBI nr
Match: XP_031736138.1 (putative germin-like protein 9-2 [Cucumis sativus])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 192/212 (90.57%), Postives = 199/212 (93.87%), Query Frame = 0


Query: 1   MAFLSTKPAT-FFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAF 60
           MAFLSTK  T FFFFFFFILSIFS AKS DPDPVVDYLTSPL AIIN TFFTFTGLRSAF
Sbjct: 1   MAFLSTKSTTFFFFFFFFILSIFSMAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAF 60

Query: 61  TDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVG 120
           TDFP NFKPTKATF+EFPALLSQSVSMAILQYPAGSINPPH+HPRSAELLLVVSGSLQVG
Sbjct: 61  TDFPSNFKPTKATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVG 120

Query: 121 FVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLP-STVF 180
           FVDT+NQFFNQTLQVGDLFLFPKGLVHFQ N DP+NSATAIATFASAN GTV+LP STVF
Sbjct: 121 FVDTANQFFNQTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSSTVF 180

Query: 181 TSGISDEVLAEAFKTDVAIIQSIKTGLTPPKS 211
           TSGISDEVLAEAFKTDVA+IQSI+ GLTPPKS
Sbjct: 181 TSGISDEVLAEAFKTDVAVIQSIRAGLTPPKS 212

[Close]

BLAST of MELO3C004688.1 vs. NCBI nr
Match: XP_038893494.1 (putative germin-like protein 9-2 [Benincasa hispida])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 181/210 (86.19%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60
           MAF STK  T   FFFFIL+IFS AKS DPDP+VD+ +SPLGAIIN + FTFTGLRSAFT
Sbjct: 1   MAFPSTKSTT--LFFFFILTIFSIAKSSDPDPIVDFFSSPLGAIINGSSFTFTGLRSAFT 60

Query: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120
           DFPPNFKPTKATF+EFPALL QSVSMAILQYPAG+INPPHTHPRSAELLLVVSGSLQVGF
Sbjct: 61  DFPPNFKPTKATFSEFPALLGQSVSMAILQYPAGTINPPHTHPRSAELLLVVSGSLQVGF 120

Query: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180
           +DT+NQFFNQTLQVGDLF+FPKGLVHFQFNADP NSATAIA FASAN GTVSLP TVFTS
Sbjct: 121 IDTTNQFFNQTLQVGDLFVFPKGLVHFQFNADPGNSATAIAAFASANPGTVSLPPTVFTS 180

Query: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 211
           GISDEVLAEAFKTDVA+I+SIK GLTPPKS
Sbjct: 181 GISDEVLAEAFKTDVAVIRSIKVGLTPPKS 208

[Close]

BLAST of MELO3C004688.1 vs. NCBI nr
Match: XP_004139583.2 (putative germin-like protein 9-2 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 7.4e-88
Identity = 170/186 (91.40%), Postives = 177/186 (95.16%), Query Frame = 0


Query: 26  KSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATFNEFPALLSQSVS 85
           KS DPDPVVDYLTSPL AIIN TFFTFTGLRSAFTDFP NFKPTKATF+EFPALLSQSVS
Sbjct: 29  KSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSVS 88

Query: 86  MAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGLV 145
           MAILQYPAGSINPPH+HPRSAELLLVVSGSLQVGFVDT+NQFFNQTLQVGDLFLFPKGLV
Sbjct: 89  MAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLV 148

Query: 146 HFQFNADPQNSATAIATFASANAGTVSLP-STVFTSGISDEVLAEAFKTDVAIIQSIKTG 205
           HFQ N DP+NSATAIATFASAN GTV+LP STVFTSGISDEVLAEAFKTDVA+IQSI+ G
Sbjct: 149 HFQLNVDPRNSATAIATFASANPGTVALPSSTVFTSGISDEVLAEAFKTDVAVIQSIRAG 208

Query: 206 LTPPKS 211
           LTPPKS
Sbjct: 209 LTPPKS 214

[Close]

BLAST of MELO3C004688.1 vs. NCBI nr
Match: KAE8652810.1 (hypothetical protein Csa_022893 [Cucumis sativus] >KAE8652849.1 hypothetical protein Csa_022727 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 1.1e-86
Identity = 168/183 (91.80%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 29  DPDPVVDYLTSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATFNEFPALLSQSVSMAI 88
           DPDPVVDYLTSPL AIIN TFFTFTGLRSAFTDFP NFKPTKATF+EFPALLSQSVSMAI
Sbjct: 4   DPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSVSMAI 63

Query: 89  LQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQ 148
           LQYPAGSINPPH+HPRSAELLLVVSGSLQVGFVDT+NQFFNQTLQVGDLFLFPKGLVHFQ
Sbjct: 64  LQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLVHFQ 123

Query: 149 FNADPQNSATAIATFASANAGTVSLP-STVFTSGISDEVLAEAFKTDVAIIQSIKTGLTP 208
            N DP+NSATAIATFASAN GTV+LP STVFTSGISDEVLAEAFKTDVA+IQSI+ GLTP
Sbjct: 124 LNVDPRNSATAIATFASANPGTVALPSSTVFTSGISDEVLAEAFKTDVAVIQSIRAGLTP 183

Query: 209 PKS 211
           PKS
Sbjct: 184 PKS 186

[Close]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL
Match: A0A5A7SY36 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002710 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60
           MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT
Sbjct: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60

Query: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120
           DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF
Sbjct: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120

Query: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180
           VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS
Sbjct: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180

Query: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 211
           GISDEVLAEAFKTDVAIIQSIKTGLTPPKS
Sbjct: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 210

[Close]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL
Match: A0A1S3CKF8 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103501975 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60
           MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT
Sbjct: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60

Query: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120
           DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF
Sbjct: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120

Query: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180
           VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS
Sbjct: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180

Query: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 211
           GISDEVLAEAFKTDVAIIQSIKTGLTPPKS
Sbjct: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 210

[Close]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL
Match: A0A0A0LSQ3 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G166250 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.0e-90
Identity = 171/186 (91.94%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 25  AKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATFNEFPALLSQSV 84
           AKS DPDPVVDYLTSPL AIIN TFFTFTGLRSAFTDFP NFKPTKATF+EFPALLSQSV
Sbjct: 2   AKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSV 61

Query: 85  SMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGL 144
           SMAILQYPAGSINPPH+HPRSAELLLVVSGSLQVGFVDT+NQFFNQTLQVGDLFLFPKGL
Sbjct: 62  SMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGL 121

Query: 145 VHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAFKTDVAIIQSIKTG 204
           VHFQ N DP+NSATAIATFASAN GTV+LPSTVFTSGISDEVLAEAFKTDVA+IQSI+ G
Sbjct: 122 VHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAG 181

Query: 205 LTPPKS 211
           LTPPKS
Sbjct: 182 LTPPKS 187

[Close]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL
Match: A0A6J1CLL1 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111012724 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.5e-67
Identity = 136/206 (66.02%), Postives = 168/206 (81.55%), Query Frame = 0


Query: 9   ATFFFFFFFIL-----SIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT-DF 68
           A+ +F FF ++     S ++ A +GD D +VD++  PL    N +FFTFTGLR A   +F
Sbjct: 4   ASSYFLFFVVVAMILSSCWNMADAGDADLIVDFI-GPLDGGANGSFFTFTGLRFAVAGEF 63

Query: 69  PPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVD 128
           PPNFKPTKATF EFPALL QSVS+ +LQ+PAG++NPPHTHPRSAELL ++SG+LQVGFVD
Sbjct: 64  PPNFKPTKATFLEFPALLGQSVSLTVLQFPAGAVNPPHTHPRSAELLFLLSGTLQVGFVD 123

Query: 129 TSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGI 188
           T+N+ FNQTLQVGD FLFPKGL+HFQFN+DP NSATAIA F SANAGTVS+P +VF+SGI
Sbjct: 124 TTNKLFNQTLQVGDXFLFPKGLLHFQFNSDPLNSATAIAAFGSANAGTVSVPLSVFSSGI 183

Query: 189 SDEVLAEAFKTDVAIIQSIKTGLTPP 209
           SD+VLA+AF T VA+++ IK GLTPP
Sbjct: 184 SDDVLAKAFNTHVAVVRRIKHGLTPP 208

[Close]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL
Match: B9RPU7 (Germin-like protein OS=Ricinus communis OX=3988 GN=RCOM_1541080 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.6e-59
Identity = 116/185 (62.70%), Postives = 149/185 (80.54%), Query Frame = 0


Query: 27  SGDPDPVVDYL--TSPLGAIINSTFFTFTGLRS--AFTDFPPNFKPTKATFNEFPALLSQ 86
           + DPD + D++   +   A I+  FFTFTG+RS  A  D+PP+FK TKA+  EFPAL  Q
Sbjct: 20  ASDPDIITDFIIPANSTAAAIDGNFFTFTGMRSIVAGDDYPPSFKVTKASMAEFPALNGQ 79

Query: 87  SVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPK 146
           SVS+A+L++PAGS+NPPHTHPRSAELL VV+GSL+VGF+DT+N+ + QTLQ GD+F+FPK
Sbjct: 80  SVSLAVLEFPAGSVNPPHTHPRSAELLFVVAGSLEVGFIDTTNKLYTQTLQPGDIFVFPK 139

Query: 147 GLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAFKTDVAIIQSIK 206
           GLVHFQ N+DP+  A A++ F SANAGTVS+PSTVF +GI D+VLA+AFKTD+A IQ IK
Sbjct: 140 GLVHFQSNSDPKEPAAAVSAFGSANAGTVSVPSTVFATGIDDDVLAKAFKTDIATIQKIK 199

Query: 207 TGLTP 208
           +GL P
Sbjct: 200 SGLAP 204

[Close]

BLAST of MELO3C004688.1 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 75/215 (34.88%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 12  FFFFFFILSIFSFAKSGDPDPVVD--------------YLTSPLGAIINSTFFTFTGL-R 71
           F FFF +LS+     + DPD + D              +   P   I  S FF F G+ +
Sbjct: 6   FGFFFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFF-FAGIGK 65

Query: 72  SAFTDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSL 131
            A  +       T A   +   L +  VS+A + Y  G +NPPHTHPR+ E++ V+ G L
Sbjct: 66  PAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGEL 125

Query: 132 QVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPST 191
            VGF+ T+N+ F +T++ G++F+FP+GL+H+Q N D    A+ I+ F S   GT S+ +T
Sbjct: 126 DVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAAT 185

Query: 192 VFTS--GISDEVLAEAFKTDVAIIQSIKTGLTPPK 210
           +FT+   I D VL   F+     I+ IK+   P K
Sbjct: 186 LFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219

[Close]

BLAST of MELO3C004688.1 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 75/204 (36.76%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 22  FSFAKSGDPDPVVDYLTSPL-------------GAIINSTFFTFTGL-RSAFTDFPPNFK 81
           F  + S DPD + D   + L              A + S  F   GL +   T+      
Sbjct: 17  FFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGAL 76

Query: 82  PTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQF 141
            T A     P L +  VS++ + Y  G +NPPHTHPR+ E++ V+ G+L VGF+ T+N+ 
Sbjct: 77  VTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKL 136

Query: 142 FNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVF--TSGISDE 201
            +Q+L+ GD+F FPKGLVHFQ N +    A+ IA F S   GT SL +T+F  T  + D 
Sbjct: 137 ISQSLKKGDVFAFPKGLVHFQKN-NGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDN 196

Query: 202 VLAEAFKTDVAIIQSIKTGLTPPK 210
           +LA+AF+T    ++ IK+   P K
Sbjct: 197 ILAQAFQTSPGTVKHIKSKFQPKK 219

[Close]

BLAST of MELO3C004688.1 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25
Identity = 62/168 (36.90%), Postives = 97/168 (57.74%), Query Frame = 0


Query: 45  INSTFFTFTGL-RSAFTDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHP 104
           I ++ F F G+ + A  +       T A   +   L +  VS+A + Y  G +NPPHTHP
Sbjct: 23  ITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHP 82

Query: 105 RSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATF 164
           R+ E++ V+ G L VGF+ T+N+ F +T++ G++F+FP+GL+H+Q N D    A+ I+ F
Sbjct: 83  RATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAF 142

Query: 165 ASANAGTVSLPSTVFTS--GISDEVLAEAFKTDVAIIQSIKTGLTPPK 210
            S   GT S+ +T+FT+   I D VL   F+     I+ IK+   P K
Sbjct: 143 NSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 190

[Close]

BLAST of MELO3C004688.1 vs. TAIR 10
Match: AT5G39110.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-25
Identity = 68/203 (33.50%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 21  IFSFAKSGDPDPVVDYLTS----PLGAIINSTF-----------FTFTGLRSA-FTDFPP 80
           + SFA++ DP P+ D+  +      G  +N  F           F ++GL  A  T+   
Sbjct: 16  VISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKV 75

Query: 81  NFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDT- 140
               T    ++ P L +  +S+  + Y     NPPHTHPR+ E+L++V G+L VGFV + 
Sbjct: 76  KSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSN 135

Query: 141 --SNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVF--T 200
             +N+ F + L  GD+F+FP G++HFQ N   +  A A A  +S NAG +++  TVF  T
Sbjct: 136 QDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG-KTPAVAFAGLSSQNAGVITIADTVFGST 195

Query: 201 SGISDEVLAEAFKTDVAIIQSIK 203
             I+ ++LA+AF+ DV +++ ++
Sbjct: 196 PPINPDILAQAFQLDVNVVKDLE 217

[Close]

BLAST of MELO3C004688.1 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25
Identity = 60/168 (35.71%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 45  INSTFFTFTGL-RSAFTDFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHP 104
           I  + F F G+ + A  +       T A   + P L + SVS+A + Y  G +NPPHTHP
Sbjct: 53  ITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHP 112

Query: 105 RSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATF 164
           R+ E++ V+ G L+VGF+ T+N+ F +T+++G++F+FP+GLVHFQ N + ++ A+ ++ F
Sbjct: 113 RATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKN-NGKSPASVLSAF 172

Query: 165 ASANAGTVSLPSTVFTS--GISDEVLAEAFKTDVAIIQSIKTGLTPPK 210
            S   GT S+ +T+F +   + ++VL + F+    ++  IK  L   K
Sbjct: 173 NSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLATKK 219

The following BLAST results are available for this feature:

BLAST of MELO3C004688.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q652P9	2.4e-49	56.25	Germin-like protein 9-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568700...	[more]
Q652Q0	2.5e-46	49.76	Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q652Q1	1.7e-39	45.69	Germin-like protein 9-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0568500...	[more]
Q7F731	2.6e-27	36.18	Germin-like protein 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=GER4 PE=2 SV...	[more]
Q9M263	1.4e-25	34.88	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]

BLAST of MELO3C004688.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463986.1	5.2e-110	100.00	PREDICTED: germin-like protein 9-3 [Cucumis melo] >KAA0035508.1 germin-like prot...	[more]
XP_031736138.1	3.0e-97	90.57	putative germin-like protein 9-2 [Cucumis sativus]	[more]
XP_038893494.1	1.2e-93	86.19	putative germin-like protein 9-2 [Benincasa hispida]	[more]
XP_004139583.2	7.4e-88	91.40	putative germin-like protein 9-2 [Cucumis sativus]	[more]
KAE8652810.1	1.1e-86	91.80	hypothetical protein Csa_022893 [Cucumis sativus] >KAE8652849.1 hypothetical pro...	[more]

BLAST of MELO3C004688.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY36	2.5e-110	100.00	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G...	[more]
A0A1S3CKF8	2.5e-110	100.00	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103501975 PE=3 SV=1	[more]
A0A0A0LSQ3	5.0e-90	91.94	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G166250 PE=3 SV=1	[more]
A0A6J1CLL1	3.5e-67	66.02	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111012724 PE=3 SV=1	[more]
B9RPU7	1.6e-59	62.70	Germin-like protein OS=Ricinus communis OX=3988 GN=RCOM_1541080 PE=3 SV=1	[more]

BLAST of MELO3C004688.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	1.0e-26	34.88	germin-like protein 10	[more]
AT1G09560.1	1.3e-26	36.76	germin-like protein 5	[more]
AT3G62020.2	1.5e-25	36.90	germin-like protein 10	[more]
AT5G39110.1	1.9e-25	33.50	RmlC-like cupins superfamily protein	[more]
AT1G02335.1	4.2e-25	35.71	germin-like protein subfamily 2 member 2 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 164..179 score: 33.87 coord: 130..150 score: 54.6 coord: 100..120 score: 53.49
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 64..199 e-value: 3.4E-33 score: 126.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 69..195 e-value: 2.1E-29 score: 102.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 28..206 e-value: 3.9E-51 score: 175.3
None	No IPR available	PANTHER	PTHR31238:SF181	GERMIN-LIKE PROTEIN	coord: 18..203
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 18..203
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 29..205 e-value: 3.89487E-57 score: 177.017
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 61..204

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C004688	MELO3C004688	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004688.1:exon:352061	MELO3C004688.1:exon:352061	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C004688.1:cds	MELO3C004688.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C004688.1	MELO3C004688.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030145	manganese ion binding