MELO3C028990 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGATGTAGTAGGCTCTTATGCAGAAATGGAGAATGTTATTGACAGAACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGGATTTTTGATTGTTGTTTTCCTAGTGCTTCAAATTTTATCTTGGGTTTCCTCCCGTTACTCCTTCGATTAAACACAAGCTTATGTGTGGTAACATATGCTTGACAGAATTTTGCAAAGAGATTGCTTGATGTTGTGGATAACTTGGGAAGAGCTTCTTCTGTTGTTAAAGGTAGAAAGGATTCAAGTGGAGCCATACCTTTTCTAAAAACCCTTCCAGAAGTGGCCGGTATGACCGAGAAACAGCTTATGGAGGTAAAGCTTTCCATTTTGCATCGACGTTGTGTAATTGGCATGAGCTATTCAACCTTTCATGAAGAAAACCACAATTTTAGTTTGTTCTGATGCTTCAAACACTTTTTCAGGTATTTAAGTAAGTCCAGGGTCGAGAAATTTGAGCCTACCAAATGAACCATTTGATCCGCATAAGCATTATGCTGTATTTTAGACACTGGATGGTCTAAACCAGAAAGCACTGTGGCTAGTTTCCTCAAGGTATTAGTTCAATTTGTGATCCTATAAATACCTCTGGCATTTGTGTACTTCAAAAAATGGGTAGTTTGAAGATATTTAGTTCATAATCATATGCTAAGGAAAATTCATTGATCAAACTGGAAGGGGGAACTGTCTTTTTAGTCTATGTTTGCTTTCAGTAATGTGAAGTTTGGTCGTTAGTCCTCGGGGTTCATGCTTAGATGGAAATTCTTTGTTCTAATGGTGTCTTTGCTCTTCTTTGGAGGCTTTTATTCGAAAGAAACTCAGGATTTTTCATGTCGATAATCCAAGTAGGGATTTTTTCGGGATCTAGTTTTTCGTTTTGCTTCTACTTGGTCTTCCACCTCTAAATTCTTTTGTGTTTATAGCCTAACTTGTCTTTACACCAGTTTTACTTCCTTTCTGTAACTTGATGCGTTTGGATGTCTCATCTTCCCCACTTTTGTATTTCCTTTTGTAGATGAAAGTTAAGTTTCTAATAAAGAATCGGTTGATAGTAGGAGCAGTCATGTCAATATGTTATAACAGTTTTATTTGCTTCCAAATTTTTTAAGAACTCAAGACAGTTGCTGTTTAGTTCAGGAGCTTGGTTTGATAGACATTGCATTGATTTTCTCATGTTTTGTACAACAGTCTGGATATACGCTACATGATCAAGTTCTATGACCAGCCAAGGTTGGTATGACTCAAAATATGGAAGATATTTCAACCAATTAATGTCTAAAAAGATGGAGGCTGCTATGGAATAATCCCAAGAATATGGTTGTTGTGGCTGTCATTGGTCTGTTCAAGTTCTTCCAATTCAATCAGGTAGCATGAGGTGCTAAGCTAAGTAATGATTCTATCTTTCCTATTGAATTAGAACTTGCTTTCCTTTTGTATACCTAACCATTAAACAAAGCTTGATGGTTGGAAGGAAGATATTACCAGTTTCCATGAGGTTATGATGATTTGTTGCTTAAGCTGTTATCAATTTTTATACTTCAGGTTTTGGAGTTGGGGACGTCAAGAAAAGGATATTTGCCAAAGGTGTGAGGGTAGGGACTTCGCTAACTACATCCACAGGAATAAAATGGAAGTCCAAGACTACTGCACAAAAGTTCATTTTGATGTTATTTTGAGTTACAAATTAAGTTTATGAGAAAGTGATCATTTGCAGTTTTACTTTTTAAAAATTCAACATTTTCGATGGCAAATCTTCCTTCCACCTCTCGTAAATTCTTTGACTTTGAGTGGATAGGTAATAAGACACTAATTACCATTTCAAAAGCTATGATTTGCAATCCAATTCTCGTAAAAACAAAATCTAAAAAGAAAAAAAATAGAAAAAGGACATAGTCTGTCTTATTTTGTTTGTTTGCTAACATGAACTTGAGTAGGTTAAAATAAACGATATTATGTAATGAATGTTGTGATCTTAATTTTATATTAATGTTGATGAAAGCATCTGCAGAACGTTGACGTTGATAGATAA ATGCAAGATGTAGTAGGCTCTTATGCAGAAATGGAGAATAATTTTGCAAAGAGATTGCTTGATGTTGTGGATAACTTGGGAAGAGCTTCTTCTGTTGTTAAAGGTAGAAAGGATTCAAGTGGAGCCATACCTTTTCTAAAAACCCTTCCAGAAGTGGCCGGTATGACCGAGAAACAGCTTATGGAGACACTGGATGGTCTAAACCAGAAAGCACTGTGGCTAGTTTCCTCAAGTCTGGATATACGCTACATGATCAAGTTCTATGACCAGCCAAGATGGAGGCTGCTATGGAATAATCCCAAGAATATGGTTGTTGTGGCTGTCATTGGTCTGTTCAAGTTCTTCCAATTCAATCAGGTTTTGGAGTTGGGGACGTCAAGAAAAGGATATTTGCCAAAGCATCTGCAGAACGTTGACGTTGATAGATAA ATGCAAGATGTAGTAGGCTCTTATGCAGAAATGGAGAATAATTTTGCAAAGAGATTGCTTGATGTTGTGGATAACTTGGGAAGAGCTTCTTCTGTTGTTAAAGGTAGAAAGGATTCAAGTGGAGCCATACCTTTTCTAAAAACCCTTCCAGAAGTGGCCGGTATGACCGAGAAACAGCTTATGGAGACACTGGATGGTCTAAACCAGAAAGCACTGTGGCTAGTTTCCTCAAGTCTGGATATACGCTACATGATCAAGTTCTATGACCAGCCAAGATGGAGGCTGCTATGGAATAATCCCAAGAATATGGTTGTTGTGGCTGTCATTGGTCTGTTCAAGTTCTTCCAATTCAATCAGGTTTTGGAGTTGGGGACGTCAAGAAAAGGATATTTGCCAAAGCATCTGCAGAACGTTGACGTTGATAGATAA MQDVVGSYAEMENNFAKRLLDVVDNLGRASSVVKGRKDSSGAIPFLKTLPEVAGMTEKQLMETLDGLNQKALWLVSSSLDIRYMIKFYDQPRWRLLWNNPKNMVVVAVIGLFKFFQFNQVLELGTSRKGYLPKHLQNVDVDR Homology
BLAST of MELO3C028990 vs. NCBI nr
Match: KAA0049810.1 (protein GrpE-like [Cucumis melo var. makuwa] >TYK23054.1 protein GrpE-like [Cucumis melo var. makuwa]) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-22 Identity = 61/83 (73.49%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MELO3C028990 vs. NCBI nr
Match: KAF3783621.1 (grpE protein [Nymphaea thermarum]) HSP 1 Score: 72.4 bits (176), Expect = 3.5e-09 Identity = 48/102 (47.06%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of MELO3C028990 vs. NCBI nr
Match: XP_038903423.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09 Identity = 49/90 (54.44%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of MELO3C028990 vs. NCBI nr
Match: XP_004149344.1 (grpE protein homolog 2, mitochondrial [Cucumis sativus] >KGN56097.1 hypothetical protein Csa_010236 [Cucumis sativus]) HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09 Identity = 48/90 (53.33%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of MELO3C028990 vs. NCBI nr
Match: XP_031489398.1 (grpE protein homolog 2, mitochondrial-like isoform X2 [Nymphaea colorata]) HSP 1 Score: 71.6 bits (174), Expect = 6.0e-09 Identity = 48/102 (47.06%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09 Identity = 43/84 (51.19%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.0e-06 Identity = 33/56 (58.93%), Postives = 34/56 (60.71%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy TrEMBL
Match: A0A5D3DHG0 (Protein GrpE-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00200 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-22 Identity = 61/83 (73.49%), Postives = 65/83 (78.31%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy TrEMBL
Match: A0A0A0L683 (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G073880 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.9e-09 Identity = 48/90 (53.33%), Postives = 52/90 (57.78%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy TrEMBL
Match: A0A2P5AS62 (GrpE protein homolog OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305620 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.0e-09 Identity = 48/88 (54.55%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy TrEMBL
Match: A0A444DY44 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00033804 PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 5.0e-09 Identity = 55/140 (39.29%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of MELO3C028990 vs. ExPASy TrEMBL
Match: A0A6P3YV01 (grpE protein homolog 2, mitochondrial-like isoform X3 OS=Ziziphus jujuba OX=326968 GN=LOC107403622 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 6.5e-09 Identity = 48/88 (54.55%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of MELO3C028990 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein ) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10 Identity = 43/84 (51.19%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of MELO3C028990 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07 Identity = 33/56 (58.93%), Postives = 34/56 (60.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|