Sgr028398.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr028398.1
Type	mRNA
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Unknown protein
Location	tig00153145: 1540585 .. 1541127 (-)
Sequence length	543
RNA-Seq Expression	Sgr028398.1
Synteny	Sgr028398.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCCGATTGAGAGCGATTATGCAGCAAAAAAATTCATCGCCGACAGAAACCCAGGAAAGGAAAAGAGAAATGGGAGTGGGTTAATGTTGCAAGGAGAAGGAGAAGGTGAGGATAAAAGCAAAGGGGAGAGGGAGAAAGAGGAAACGAGCAGAAATAAAACAAAGCAGAGGAAAGGAAAGCAAAGGAAAGAGGTTCGCACAGCAGCAGTGCTTTTGCTTTTGCAGTTTTGCTTTATGGGTTGGGATCTGATGAATCTGCGAGAAATATACAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGCTACGTTCGCTCCCTCGCTCGCTGTTGCAGTACAGTATTTAGTATGGAGGTGGGGGGGCCCAGAAGAAGCGTGTGAAGCACCACCATGGGAGCTCGCAGGTGCGATGGATTTCTGTCGTTTTGGGTTAATAATTAATATCGGGAATCAGGAACCCCTCCTTCCATGTTTCATCTCATCTTCTTCTCCTCCCACTTTTCATTTCTTTTCTTTCTATTCCTCTCTCTCTCTCTCCGTGTGA

mRNA sequence

ATGAGGCCGATTGAGAGCGATTATGCAGCAAAAAAATTCATCGCCGACAGAAACCCAGGAAAGGAAAAGAGAAATGGGAGTGGGTTAATGTTGCAAGGAGAAGGAGAAGGTGAGGATAAAAGCAAAGGGGAGAGGGAGAAAGAGGAAACGAGCAGAAATAAAACAAAGCAGAGGAAAGGAAAGCAAAGGAAAGAGGTTCGCACAGCAGCAGTGCTTTTGCTTTTGCAGTTTTGCTTTATGGGTTGGGATCTGATGAATCTGCGAGAAATATACAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGCTACGTTCGCTCCCTCGCTCGCTGTTGCAGTACAGTATTTAGTATGGAGGTGGGGGGGCCCAGAAGAAGCGTGTGAAGCACCACCATGGGAGCTCGCAGGTGCGATGGATTTCTGTCGTTTTGGGTTAATAATTAATATCGGGAATCAGGAACCCCTCCTTCCATGTTTCATCTCATCTTCTTCTCCTCCCACTTTTCATTTCTTTTCTTTCTATTCCTCTCTCTCTCTCTCCGTGTGA

Coding sequence (CDS)

ATGAGGCCGATTGAGAGCGATTATGCAGCAAAAAAATTCATCGCCGACAGAAACCCAGGAAAGGAAAAGAGAAATGGGAGTGGGTTAATGTTGCAAGGAGAAGGAGAAGGTGAGGATAAAAGCAAAGGGGAGAGGGAGAAAGAGGAAACGAGCAGAAATAAAACAAAGCAGAGGAAAGGAAAGCAAAGGAAAGAGGTTCGCACAGCAGCAGTGCTTTTGCTTTTGCAGTTTTGCTTTATGGGTTGGGATCTGATGAATCTGCGAGAAATATACAGAGAGAGAGAGAGAGAGAGAGAGAGGGGGGCTACGTTCGCTCCCTCGCTCGCTGTTGCAGTACAGTATTTAGTATGGAGGTGGGGGGGCCCAGAAGAAGCGTGTGAAGCACCACCATGGGAGCTCGCAGGTGCGATGGATTTCTGTCGTTTTGGGTTAATAATTAATATCGGGAATCAGGAACCCCTCCTTCCATGTTTCATCTCATCTTCTTCTCCTCCCACTTTTCATTTCTTTTCTTTCTATTCCTCTCTCTCTCTCTCCGTGTGA

Protein sequence

MRPIESDYAAKKFIADRNPGKEKRNGSGLMLQGEGEGEDKSKGEREKEETSRNKTKQRKGKQRKEVRTAAVLLLLQFCFMGWDLMNLREIYRERERERERGATFAPSLAVAVQYLVWRWGGPEEACEAPPWELAGAMDFCRFGLIINIGNQEPLLPCFISSSSPPTFHFFSFYSSLSLSV

Homology

The following BLAST results are available for this feature:

BLAST of Sgr028398.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028398.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028398.1 vs.


Match Name	E-value	Identity	Description

BLAST of Sgr028398.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..55

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sgr028398	Sgr028398	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sgr028398.1.exon1	Sgr028398.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Sgr028398.1	cds.Sgr028398.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sgr028398.1	Sgr028398.1-protein	polypeptide