Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGGGCGAGGAAAGAACATCGTGGACACCTTACGGCGGAGGAGTTGGAGGAAAAGTTCGGAAGCCAACCTCAAGAAAGCCGCCGCCGACCCCTTACGCTCGGCCGGAGCAAAACCAATCGCAAAGGCGCTGGCTTTTGAAGCTCGTTGATCCAGCTTACCGGCTCATCACCGGTGGCGCCACACGACTGCTTCCCTATTTGTTCTCCAAATCACTGCCCTCCAATGCCCTTCCGTCTCCAGGAGACGAGGATCATGGTCGTTTGCGTTCTTCCCCAACCTTCTCTTGTTAAATTCTCTATCTAGTGCCACCTGCTTAGGCTTTCGGAAATCGCATTTTCTTGGTTGAAATCAATACCCTTTTCATACTCTCTATTTTAATTCTATGCATTCGAGGGAATTAATAGCTTTTTTTATGGTAGCGAGGTTTCTAAAATTTTCCCCTCAGTAGACATCTTATTGCATTTGCAACGTAACCCTTCTGATTTACACGAATGAAGTAAAAGATTGTAGCTATGTTTTGCAATGCTGCCAATCTAATGGACATTTTTCACATCAGACTACATAGAATGTTATTATTGGTTTTATTTGTACATGATTTAGTAAGACTTGTTGTTGATGATGAATTCTTTTTGAGCAGATAAAGTGGAGGCAGAGGTGGAGGATGACGTCTCTGGTGAAGATGAACTCCGCAATGTAAATGTAATTCTTTTTTGTTTTGTTGTTTCATTTACGCTGTTCCATGCCTTATGAGCACCTTCTTTTCGATGCCATCTTATGAATGAGTATCTGGGTATTGCTTTGGTTGTGCTTACTAGAATGCAATAGAAATAAAGTCATAGGAAAAGGGTTACCTACTCTTAATGGTCACTTTTAACGGGTGACCATTGTTTGATCGTGCACTAGTCTAGAAAATTATAATTGTTTTCACCTTATTAGGGGCAGACTCATGCTTGTTTGCTAGTTGAAGTTATTGATCTTACATTGAACTATGACATATTCGTTCCCATGTTGTTGACTGTGGATGATTGTTTTCTGAAAGAAAATCTGATTGTTTATTAGTTAAATTTTATTTACCTACTATAATTGTTTAATCTCTTGTTTCCCTTGCCTGTATAGCAATATTCTTATCCTGATCCTGATGGCTTGGAGTTACAAAATCACATTTGCTTATCCATTCTTTTCCCTTAACATCCATAGGAATGATTTCCTATGTCCCGTTTTTTGTTTTCATTCAGGTCAATTTTACTTTTCAGTTGATAAATTATTTGCATACAGTAATGTGATTCATTGACATGCATTTTGGTTCATTCTTGCAGCAAGGGGTATCTACCTTACCTGAATTACCTGGTCCTAGTGGTGAGGCAAATAAATCAGAGAACAATTCTGATTTTAATGGCAACCAAAAGGACAAAGAGAATGATGCATTAGCTTGGATTGGAAATTTTGATGTTGAAAATGTGATCCGAGGAAAAAAATTTTCGAGGTAAATTGTAGAAATTTGACTATTCAGTTTGTTCTATTGGATGAGAGTGATGTGTCATTTATTGAGTTTAAGAAGCATGGACTTGGGCACAGCCCAACATGATATGGATATGATGACTCATTTCTAGAAAATTTAGACATAGGCATGACAAGGACTTGTTTAGTAAAATATTTACTTTCCAAATATATTTGAACATTTTTACCCATTTCAATAATTTTCAGATTAAAAATTTATTGTAATTTATGATATTGATGTTTGGAAGTCGATTGGGAAGTGATGTAATATGCAACATTTAAAGAAGTTGAAGAAGCCAATTATGTGTATCTGCCGCTCTGCAATTTCTTATAGTATAGGATTTGTAGAAAATCCAAAACAAATGAACATTTTATAAGTGATTCCACATCTCATAAAAAGAAAATTAAGATCTATTATGTTCATACAATTATATGCTTAAATAACAGCTTTGAAACTTTTCTTTCTTAAAATTTATTTATTTTTCTCATCCCTTGTTTCTCATGTCCATTAATTTCTTTTTAAAGTTTTAAAAAGTGCCCAACCAATCTCAACACATGCTTGACTAATGTTGGAGTGTCCACAACCTGTAGGACACACAAACATGTTTCCCAAACTTAATCTTGCGTGCATCTTCATTTTTTTGCATCACAAACTTCAGTTGAAGTGTTCCCTTGTTGAAATGCAACGGGATGAAACATTGTTGTCAGGGAACTTATTTTGTCCATGACTCCATGATGGCAGTACTTTGCCCTGCTATGAATAAATAGGTTATTTGCTTCTGAGGTTGCATTCAAGAGGTAGTCAAATATTCATTTATAATGGTCTCGAGAATATTATGTCTAAGCATATTTATCATTATTAATTTTCTACCATAAACTGATAGTGCCTCTATATCTCTTTTGGTCCTCGTAAGTCGTATACATTTTCTACAGCGACATTGGCCAATTTGAGCACTGGATTTCTTTAAATTGGCTGATTTCCTATGCAGGGATGAAGTGAGTCGTTTATTAGAGATATTACAATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAAGAAATTTTCACCACGGAGCATTGAAAAACAAGCTGAGCAGCCATCTGCTGCAAATAGAGTTCTAAAAATGCCTCGCGAAGAAAAGCAGGAAGATTTGGAGAGAGCTATGTGGGGAAACTTAACTCCTCATCCACAGTCATCTGTGAGTACAGTAATCTTTGAGTAGTTCCTATAGAAAATAAGTAGATTAAATGTCACCTAGCCGCCATGAATTTGGAACTTCTTTTACATCTGGTGGTCTAATGTGTGTCAGATTTGCCAAATTGCTCAGTTGTTTCATGCATCAGTGCAGACTGTAGAATAATCTCTTCCATTTTCACGATATCTTATGTTTCTTTGATCGTTTTTATGAGTCAATGTTAGTATTTAGTAATTGTCTGCAATGCTGTTCGATAGATAGGTTTTTCATTCTAAGATGAACAAATCATTCTAGGTTACCTTTTTCCTGTATCCATTAATAGTATAATGTATACAACACCAAGGAGATTGGTTCAGTTTTCTATATGGACGAAAACCAGACCAAACCGACGAATGTGTTATCCATTATTATGTGATAACTAGGTTGTTCATATATACATACATATATATATATATTCTATATATATATATATATATATACGCTGAAGTAATTATTTTAGTACTGTTCTTATTACTTAATAATTGAATGGTGTAATACTATGAAAATCAAATTGTAAAACTAGTGCTGATCTGGCAGTCATTGGTCAAAATAATAAAATGAATCATCTCTCTGTTAGGAATATGATAAATTTAGTTAATGTCTGGAAAGTCAGTAGACAAATATAAGTTAAAGCTCTAGGATGGGGACTTGTACAAGAACAAGAACCGACAAATTATCTTTGACAAAGTTTTCAATATTTATTCGCTGTTAAGAGTGTGTTATGCAAATTTTTCTGCCTCTCTAATAATTCAATATTGGATGTATGCTAGCAGAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATCCGAAACAGGCTTGCTTTCTGACAACGTACCAGATGATGAAGGGGCTTTGCTTCATGGTGATCATCAAATGTCAATGCCCTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAGCGTGGTTATTTAACTCCGAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACCCCTTATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGGTTTGTAGACTTAGTCTTCACTTGCCTTTTATTTTGGTCGTGACATGGTGTATATATAGTAAACAGACTGCATATAATTAACCATTCCCAAGCACGTAAACAGCTAACCCAATTGCAAGGAGATGCTCAAAAGTTTGTGAATACATCATCACCTCTCTGGCAGCAGCCACGAACTCCAGCTTATGTTCAGGTAATTTCTTGTATTATTAAGCACTTGATGACTGAAAACCATTAGTACGACCCTAGGAATTCTGGTTGAAAAGTTATTTTTGTAGCATTTTACATTGACCAATATCGATTGGAGTATGACAAGCTTCAGTACTGAACTTTTTTTTTGTGTCCATAATGAGTAGGCATTTAAGGTTAGAATAAAAGCTGATTCTTTTACCAAGAAGAATAAAAGCTGAAATATGAATGATAAAGAACTGGAGTATACTTTTTATGCATGCATGCATGCATGCATATGTAGGCTTGTTTAGTGCCCGTATCGAGTATGTCATTTATGTGTTAGTGTTCACCCTTAAACCTTTTCTTCAGCCAAAATGTTCAATTATGCTCGATCTTTTGTTTCTTGCATGCTCTTGTTGGTAGGATGTATCTAGAGCTAGTGGTTTGGTTTTATCCATTACTTTGGTGCTGTTGTTGCTGCTGTGCTGCTTTATCCTGCCGAAGTTTATTTCTTTTTCTATGACTCTGATATAAACCAATTAGATGGTTAAAGTTTTTCATCCAGACGTACGCTTGAATTAAATGGATTAGCTGTAACGGTTTACTAATCTATGGTGCCTTTAGGTGGTTGTTTATTGTTTAATCATAGGACAATTCCTGTTTTCAGGATGAGCTTTAATTCTGGAGCATTGTTTTAGGGATTTTATATCAAATAGTACATTAATTCCGTATGCACTACATAGTTACTTCTTGAGCATCATCTGCTGTCAGTACATATTAGAATGGTTTACATTTGTAGTCTGCCAAGCTCAAGTTCCTGCAGGTTGTCTTTATTATTTATTTTTTCTCTATTTGTCTATATAGATGACATCAAGCAATGATCCATTGGAGGAGGCAACTGGTTCCATTGGACCAATTCGTAGGCTTCGGCAAAAGGCATTTGCAGTTACTAATTCCAGACGATCTGCTTATTTTTATCCTACCAGCCAACAAGAGACGAAGGTAGAGAATTCCAATATTACGAAAGACATTTTACCTGATATGAAGAAGAATCTGGAACTTGGAGGAGCAAGCACCATTCCTCTATCACATTCAGTGGGAAACAAGAGCTCTGCATCGAGTCTGCTGACCGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATACTAGAGCATATTAGTAGAAACCCACCCACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGCATGGAAGAAAACCCCATCTTCCGATGTACATACCGCCAAGCCAAATGAAACTAATAGTTTGGCCGCAGAGTTAGATTCTCGCCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATAAGGGAAAACCTGTGTCTACGGTTCTCCCAAAGGAGATTGTTGGCAGAGATTCTGATGCTGTAAACCAAAATTCTTCTGATCTGAAGTTTAGACTTAGCAATGCTGATTTGAAACACAAGGATGATGCAGGCTTAAAAATGAATAGCTCGTGGCCTAAGGTATCACTGCAACTTTTTCACAATCAGTTTTAATTCTGTGATGTGTTATTGACCAACTTACCGATGCTTTTTGGTTATTTATTTTGAAATTGTTAACATAAGCTTGAAGAGTTCTTAATTACTGTTGAATTCATGGGCAGGATGCTCCAAAGATTGTTCCAGCTCTTGGATCCGAAGGGGGGACTCAAATTAAGCCTTCCCCCTCTCTTGGAACTAAACCAGGTTTTCCATCCATTACCATCAACAAGCCTGAGTCAAAATGGGCATTTTCTTCCGACAGTAGTTCGGCGTTTACTTTCCCTGTTTCAGGAGCATCCTCGGGAATGCTCTCAGAACCACCAACACCATCCATCTTTCCATCAACCAGCCTTGGGGGCAGTCAGCAGCATCTATTGAAGCATGAGACTGCAGTTCCTTCATACAGTTTTGGCTCAAAGCAGTCCAGTCCTACCCTGGTTTTCTCATTCTCTTCAACAAATAGCGATACAATCCACACTGATGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATTATACGAGACTGTCCTTCGGTTCCGTCGGCAAAGATGCGGTTTGTTGCTAACCAATTAGACATGTCAAGTTTAGTTTTTGATCTTCTGGTTGTGGAAATGACTATAGGAATTGTCAAAAACGCGGAAAGAAATGTGTGTCAAATATCATATTTTTATAAACGAGTAGGAAATTGCAAATTCAATCAAAAAACGGAAAACAGCTTCTGTGCCAGTTGCTAGTTTTATGTATATTGCCGTTGATGATGATGATATGCTTTAATTTTCATGTATATTAGTTTGGATTTAATCAAAATGTCACATCGTTAAGTGAGAACAAGATTCCTCATTTTAAGTTTTATTTAGTTTAAAGTTCAGAACTAGGCCAAGTTTCACATGTGAAATGTTTGATGCAGATTCCCAAAGAATTCCAGGAAAATGTGGGAAAAGGGGATGGATACCTATATCCTAATTCCTATCCATGAAAGATAAGTAGATATTTGATTGGATGACAGGACAAGAACAAGTCCACGTGTCAGCGTTGGAATCACAGAATGGATGAACAAGTTGTGCCCTGAAAATGCAAAAGTTTAGAGATGCCAGCCGGAGAGAATCACATGTTGCTCTAATATTGCATGTAACGAGGGAGTCATTCCTTCCTCTCAGCTTAAGATCAGATCAGCTGACTGGTCCCTGTTTGAAGCATCATCAAAGTGGCTAGAGATACAAACACACCCCTTTCCAGGAAACACATCAGAAATTCCTAGAGAGAGAGAGAGGCCATCCAAAGTGGAAGGGTCCAAGAAGAAAGTGAGTGGGTGAGTGCGGAAGGAAGGGGGGGTGTGTTGGATTGTGGGGAAGAAAGTCAGAGATTGATATGACATTGAAGTGAATTGAATGCGCAGCAGACATGACTGTGACGTTTCAGATTCTAAATGTCAGAAGTTTTCTGAAGGATCAGCGGAACCGCCCAGCGCCAGCGCCAGCGCCAGCGCCAGCAGCCGTATTACTTCCACCCAACCCACCACCGCTACCTCCACTCTACCCTGTTTCTCCTGTCTTTTTCCAACTGAAGAAAATTTGTTCTACCATTTTCCTTTTCTTTCTTTTGCCAGCTTGTAA
mRNA sequence
ATGGAGAGGGGCGAGGAAAGAACATCGTGGACACCTTACGGCGGAGGAGTTGGAGGAAAAGTTCGGAAGCCAACCTCAAGAAAGCCGCCGCCGACCCCTTACGCTCGGCCGGAGCAAAACCAATCGCAAAGGCGCTGGCTTTTGAAGCTCGTTGATCCAGCTTACCGGCTCATCACCGGTGGCGCCACACGACTGCTTCCCTATTTGTTCTCCAAATCACTGCCCTCCAATGCCCTTCCGTCTCCAGGAGACGAGGATCATGATAAAGTGGAGGCAGAGGTGGAGGATGACGTCTCTGGTGAAGATGAACTCCGCAATGTAAATCAAGGGGTATCTACCTTACCTGAATTACCTGGTCCTAGTGGTGAGGCAAATAAATCAGAGAACAATTCTGATTTTAATGGCAACCAAAAGGACAAAGAGAATGATGCATTAGCTTGGATTGGAAATTTTGATGTTGAAAATGTGATCCGAGGAAAAAAATTTTCGAGGGATGAAGTGAGTCGTTTATTAGAGATATTACAATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAAGAAATTTTCACCACGGAGCATTGAAAAACAAGCTGAGCAGCCATCTGCTGCAAATAGAGTTCTAAAAATGCCTCGCGAAGAAAAGCAGGAAGATTTGGAGAGAGCTATGTGGGGAAACTTAACTCCTCATCCACAGTCATCTAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATCCGAAACAGGCTTGCTTTCTGACAACGTACCAGATGATGAAGGGGCTTTGCTTCATGGTGATCATCAAATGTCAATGCCCTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAGCGTGGTTATTTAACTCCGAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACCCCTTATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTAACCCAATTGCAAGGAGATGCTCAAAAGTTTGTGAATACATCATCACCTCTCTGGCAGCAGCCACGAACTCCAGCTTATGTTCAGATGACATCAAGCAATGATCCATTGGAGGAGGCAACTGGTTCCATTGGACCAATTCGTAGGCTTCGGCAAAAGGCATTTGCAGTTACTAATTCCAGACGATCTGCTTATTTTTATCCTACCAGCCAACAAGAGACGAAGGTAGAGAATTCCAATATTACGAAAGACATTTTACCTGATATGAAGAAGAATCTGGAACTTGGAGGAGCAAGCACCATTCCTCTATCACATTCAGTGGGAAACAAGAGCTCTGCATCGAGTCTGCTGACCGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATACTAGAGCATATTAGTAGAAACCCACCCACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGCATGGAAGAAAACCCCATCTTCCGATGTACATACCGCCAAGCCAAATGAAACTAATAGTTTGGCCGCAGAGTTAGATTCTCGCCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATAAGGGAAAACCTGTGTCTACGGTTCTCCCAAAGGAGATTGTTGGCAGAGATTCTGATGCTGTAAACCAAAATTCTTCTGATCTGAAGTTTAGACTTAGCAATGCTGATTTGAAACACAAGGATGATGCAGGCTTAAAAATGAATAGCTCGTGGCCTAAGGATGCTCCAAAGATTGTTCCAGCTCTTGGATCCGAAGGGGGGACTCAAATTAAGCCTTCCCCCTCTCTTGGAACTAAACCAGGTTTTCCATCCATTACCATCAACAAGCCTGAGTCAAAATGGGCATTTTCTTCCGACAGTAGTTCGGCGTTTACTTTCCCTGTTTCAGGAGCATCCTCGGGAATGCTCTCAGAACCACCAACACCATCCATCTTTCCATCAACCAGCCTTGGGGGCAGTCAGCAGCATCTATTGAAGCATGAGACTGCAGTTCCTTCATACAGTTTTGGCTCAAAGCAGTCCAGTCCTACCCTGGTTTTCTCATTCTCTTCAACAAATAGCGATACAATCCACACTGATGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATTATACGAGACTGTCCTTCGGTTCCGTCGGCAAAGATGCGGGAGTCATTCCTTCCTCTCAGCTTAAGATCAGATCAGCTGACTGGTCCCTGTTTGAAGCATCATCAAAGTGGCTAGAGATACAAACACACCCCTTTCCAGGAAACACATCAGAAATTCCTAGAGAGAGAGAGAGGCCATCCAAAGTGGAAGGGTCCAAGAAGAAAGTGAGTGGCAGACATGACTGTGACGTTTCAGATTCTAAATGTCAGAAGTTTTCTGAAGGATCAGCGGAACCGCCCAGCGCCAGCGCCAGCGCCAGCGCCAGCAGCCGTATTACTTCCACCCAACCCACCACCGCTACCTCCACTCTACCCTGTTTCTCCTGTCTTTTTCCAACTGAAGAAAATTTGTTCTACCATTTTCCTTTTCTTTCTTTTGCCAGCTTGTAA
Coding sequence (CDS)
ATGGAGAGGGGCGAGGAAAGAACATCGTGGACACCTTACGGCGGAGGAGTTGGAGGAAAAGTTCGGAAGCCAACCTCAAGAAAGCCGCCGCCGACCCCTTACGCTCGGCCGGAGCAAAACCAATCGCAAAGGCGCTGGCTTTTGAAGCTCGTTGATCCAGCTTACCGGCTCATCACCGGTGGCGCCACACGACTGCTTCCCTATTTGTTCTCCAAATCACTGCCCTCCAATGCCCTTCCGTCTCCAGGAGACGAGGATCATGATAAAGTGGAGGCAGAGGTGGAGGATGACGTCTCTGGTGAAGATGAACTCCGCAATGTAAATCAAGGGGTATCTACCTTACCTGAATTACCTGGTCCTAGTGGTGAGGCAAATAAATCAGAGAACAATTCTGATTTTAATGGCAACCAAAAGGACAAAGAGAATGATGCATTAGCTTGGATTGGAAATTTTGATGTTGAAAATGTGATCCGAGGAAAAAAATTTTCGAGGGATGAAGTGAGTCGTTTATTAGAGATATTACAATCAAGGGCTCTTGAACCTTCTAATAAAGTGGAAGACAAGAAATTTTCACCACGGAGCATTGAAAAACAAGCTGAGCAGCCATCTGCTGCAAATAGAGTTCTAAAAATGCCTCGCGAAGAAAAGCAGGAAGATTTGGAGAGAGCTATGTGGGGAAACTTAACTCCTCATCCACAGTCATCTAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATCCGAAACAGGCTTGCTTTCTGACAACGTACCAGATGATGAAGGGGCTTTGCTTCATGGTGATCATCAAATGTCAATGCCCTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAAGTCAGCGTGGTTATTTAACTCCGAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACCCCTTATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTAACCCAATTGCAAGGAGATGCTCAAAAGTTTGTGAATACATCATCACCTCTCTGGCAGCAGCCACGAACTCCAGCTTATGTTCAGATGACATCAAGCAATGATCCATTGGAGGAGGCAACTGGTTCCATTGGACCAATTCGTAGGCTTCGGCAAAAGGCATTTGCAGTTACTAATTCCAGACGATCTGCTTATTTTTATCCTACCAGCCAACAAGAGACGAAGGTAGAGAATTCCAATATTACGAAAGACATTTTACCTGATATGAAGAAGAATCTGGAACTTGGAGGAGCAAGCACCATTCCTCTATCACATTCAGTGGGAAACAAGAGCTCTGCATCGAGTCTGCTGACCGTCCGTCCACAGTCCAGTCAGGTTGCTAGGACAATACTAGAGCATATTAGTAGAAACCCACCCACTCCTAAAGAAAAGACTGAAGAGTTAAAGAGAGCAATTGCATGGAAGAAAACCCCATCTTCCGATGTACATACCGCCAAGCCAAATGAAACTAATAGTTTGGCCGCAGAGTTAGATTCTCGCCAAAAAGCAAACCAAGTAGATCAGAACTGTCACCCCCAATTGAGCGATAAGGGAAAACCTGTGTCTACGGTTCTCCCAAAGGAGATTGTTGGCAGAGATTCTGATGCTGTAAACCAAAATTCTTCTGATCTGAAGTTTAGACTTAGCAATGCTGATTTGAAACACAAGGATGATGCAGGCTTAAAAATGAATAGCTCGTGGCCTAAGGATGCTCCAAAGATTGTTCCAGCTCTTGGATCCGAAGGGGGGACTCAAATTAAGCCTTCCCCCTCTCTTGGAACTAAACCAGGTTTTCCATCCATTACCATCAACAAGCCTGAGTCAAAATGGGCATTTTCTTCCGACAGTAGTTCGGCGTTTACTTTCCCTGTTTCAGGAGCATCCTCGGGAATGCTCTCAGAACCACCAACACCATCCATCTTTCCATCAACCAGCCTTGGGGGCAGTCAGCAGCATCTATTGAAGCATGAGACTGCAGTTCCTTCATACAGTTTTGGCTCAAAGCAGTCCAGTCCTACCCTGGTTTTCTCATTCTCTTCAACAAATAGCGATACAATCCACACTGATGCCTCAAATATTAAGTTTAGCTTTGGATCCGATGATTATACGAGACTGTCCTTCGGTTCCGTCGGCAAAGATGCGGGAGTCATTCCTTCCTCTCAGCTTAAGATCAGATCAGCTGACTGGTCCCTGTTTGAAGCATCATCAAAGTGGCTAGAGATACAAACACACCCCTTTCCAGGAAACACATCAGAAATTCCTAGAGAGAGAGAGAGGCCATCCAAAGTGGAAGGGTCCAAGAAGAAAGTGAGTGGCAGACATGACTGTGACGTTTCAGATTCTAAATGTCAGAAGTTTTCTGAAGGATCAGCGGAACCGCCCAGCGCCAGCGCCAGCGCCAGCGCCAGCAGCCGTATTACTTCCACCCAACCCACCACCGCTACCTCCACTCTACCCTGTTTCTCCTGTCTTTTTCCAACTGAAGAAAATTTGTTCTACCATTTTCCTTTTCTTTCTTTTGCCAGCTTGTAA
Protein sequence
MERGEERTSWTPYGGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLITGGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPGPSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRALEPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNEVGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTPKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQLSDKGKPVSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALGSEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPSIFPSTSLGGSQQHLLKHETAVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGSDDYTRLSFGSVGKDAGVIPSSQLKIRSADWSLFEASSKWLEIQTHPFPGNTSEIPRERERPSKVEGSKKKVSGRHDCDVSDSKCQKFSEGSAEPPSASASASASSRITSTQPTTATSTLPCFSCLFPTEENLFYHFPFLSFASL
Homology
BLAST of Sgr027116.1 vs. NCBI nr
Match:
XP_022144995.1 (nuclear pore complex protein NUP1 isoform X2 [Momordica charantia])
HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 621/738 (84.15%), Postives = 660/738 (89.43%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELRNVN+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELRNVNKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSSKLNE
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSKLNE 240
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
V ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPGA
Sbjct: 241 VVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPGA 300
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQQ
Sbjct: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQQ 360
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
PRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN NI
Sbjct: 361 PRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCNI 420
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPTP
Sbjct: 421 LKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPTP 480
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGKP 540
KEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 KEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGKT 540
Query: 541 VSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALGS 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+GS
Sbjct: 541 VSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIGS 600
Query: 601 EGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPSI 660
E GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPSI
Sbjct: 601 EEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPSI 660
Query: 661 FPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
FPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFGS
Sbjct: 661 FPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFGS 720
Query: 721 DDYTRLSFGSVGKDAGVI 736
+D+TRLSFGSVGKDA +
Sbjct: 721 NDHTRLSFGSVGKDADAV 738
BLAST of Sgr027116.1 vs. NCBI nr
Match:
XP_022144994.1 (nuclear pore complex protein NUP1 isoform X1 [Momordica charantia])
HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 621/739 (84.03%), Postives = 660/739 (89.31%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELRNVN+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELRNVNKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSS-KLN 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSS KLN
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSQKLN 240
Query: 241 EVGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPG 300
EV ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPG
Sbjct: 241 EVVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPG 300
Query: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQ 360
AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQ
Sbjct: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQ 360
Query: 361 QPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSN 420
QPRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN N
Sbjct: 361 QPRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCN 420
Query: 421 ITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPT 480
I K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPT
Sbjct: 421 ILKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPT 480
Query: 481 PKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGK 540
PKEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 PKEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGK 540
Query: 541 PVSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALG 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+G
Sbjct: 541 TVSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPS
Sbjct: 601 SEEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFG 720
IFPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFG
Sbjct: 661 IFPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFG 720
Query: 721 SDDYTRLSFGSVGKDAGVI 736
S+D+TRLSFGSVGKDA +
Sbjct: 721 SNDHTRLSFGSVGKDADAV 739
BLAST of Sgr027116.1 vs. NCBI nr
Match:
XP_022144996.1 (nuclear pore complex protein NUP1 isoform X3 [Momordica charantia])
HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 619/739 (83.76%), Postives = 658/739 (89.04%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELR N+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELR--NKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSS-KLN 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSS KLN
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSQKLN 240
Query: 241 EVGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPG 300
EV ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPG
Sbjct: 241 EVVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPG 300
Query: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQ 360
AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQ
Sbjct: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQ 360
Query: 361 QPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSN 420
QPRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN N
Sbjct: 361 QPRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCN 420
Query: 421 ITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPT 480
I K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPT
Sbjct: 421 ILKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPT 480
Query: 481 PKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGK 540
PKEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 PKEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGK 540
Query: 541 PVSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALG 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+G
Sbjct: 541 TVSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPS
Sbjct: 601 SEEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFG 720
IFPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFG
Sbjct: 661 IFPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFG 720
Query: 721 SDDYTRLSFGSVGKDAGVI 736
S+D+TRLSFGSVGKDA +
Sbjct: 721 SNDHTRLSFGSVGKDADAV 737
BLAST of Sgr027116.1 vs. NCBI nr
Match:
XP_022971904.1 (nuclear pore complex protein NUP1-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 603/735 (82.04%), Postives = 634/735 (86.26%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER E R S TPY GGGVGGKVRKP SRKPPPTPYARPEQNQ QRRWL KLVDPAYRLIT
Sbjct: 1 MERAEVRASSTPYGGGGVGGKVRKPISRKPPPTPYARPEQNQPQRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALP PGDED D VEAE+ED+ GE ELR NQG STL LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPCPGDEDQDHVEAELEDNAPGE-ELR--NQGASTLDGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
PSGEA +S NNSD NG Q D+E DALA GNFD+E I+GK FSRDEVSRLLEI+QSRAL
Sbjct: 121 PSGEACRSNNNSDVNGRQNDRETDALAGNGNFDIEKWIQGKTFSRDEVSRLLEIIQSRAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
EPS KVED K SPRSIEKQ+EQP AANRV+KMP EEK+EDLERA WGNLTPHP SS LN
Sbjct: 181 EPSKKVEDNKISPRSIEKQSEQPPAANRVIKMPHEEKKEDLERATWGNLTPHPHSSTLNA 240
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
VGASPVDIARAYMSNRKSE GLLSD +PDDE LL+GDHQMS FIP MSPNPSTCWPGA
Sbjct: 241 VGASPVDIARAYMSNRKSEPGLLSDKIPDDERTLLNGDHQMSKSFIPFMSPNPSTCWPGA 300
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSKLTQLQGD QKFVNT SPLWQQ
Sbjct: 301 MSESQRSYLTPRSQRGRFGTHNFPRTPYSRSIFSKSKSKLTQLQGDTQKFVNTPSPLWQQ 360
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
TPAY QMTSSNDP +EATGSIGP RRL +KA AVTNSRRSAY YPT Q ETKVENSNI
Sbjct: 361 SLTPAYSQMTSSNDPFDEATGSIGPFRRLGRKASAVTNSRRSAYHYPTRQAETKVENSNI 420
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
++ ILPDMKKNLELGGASTIPLS SVGN SS SSLLTVRPQSSQVARTILEHISRNPPTP
Sbjct: 421 SEGILPDMKKNLELGGASTIPLSPSVGNNSSESSLLTVRPQSSQVARTILEHISRNPPTP 480
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQLSDKGKPV 540
KEK EELKRAI WK+TPSS V T KPNET SLA ELDSRQ NQVDQNCHP LS+KGK V
Sbjct: 481 KEKNEELKRAIEWKRTPSSSVQTIKPNETISLAVELDSRQNVNQVDQNCHPTLSNKGKTV 540
Query: 541 STVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAP--KIVPALG 600
ST+ + GR+SDAVNQNSSDL+FRLSNAD K+KDDAGLK+NSS PKD P KIVPALG
Sbjct: 541 STIHLESSAGRNSDAVNQNSSDLRFRLSNADSKYKDDAGLKINSSSPKDFPPKKIVPALG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GTQ+KP SLGTKPGFPSITI KPES W S DS SAFTFPVSGASSGM+SEPPTPS
Sbjct: 601 SEVGTQMKPFSSLGTKPGFPSITIKKPESGWTISPDSGSAFTFPVSGASSGMISEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHETAVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
IFPSTS+GGSQ LLK E AVPSYSFGSK+SSPTLVFSF STNS+TI +DASNIKFSFGS
Sbjct: 661 IFPSTSIGGSQPLLLKTENAVPSYSFGSKKSSPTLVFSFPSTNSNTISSDASNIKFSFGS 720
Query: 721 DDYTRLSFGSVGKDA 733
DD+TRLSF SVGKDA
Sbjct: 721 DDHTRLSFSSVGKDA 732
BLAST of Sgr027116.1 vs. NCBI nr
Match:
XP_022971896.1 (nuclear pore complex protein NUP1-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 603/735 (82.04%), Postives = 634/735 (86.26%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER E R S TPY GGGVGGKVRKP SRKPPPTPYARPEQNQ QRRWL KLVDPAYRLIT
Sbjct: 45 MERAEVRASSTPYGGGGVGGKVRKPISRKPPPTPYARPEQNQPQRRWLSKLVDPAYRLIT 104
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALP PGDED D VEAE+ED+ GE ELR NQG STL LPG
Sbjct: 105 GGATRLLPYLFSKSLPSNALPCPGDEDQDHVEAELEDNAPGE-ELR--NQGASTLDGLPG 164
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
PSGEA +S NNSD NG Q D+E DALA GNFD+E I+GK FSRDEVSRLLEI+QSRAL
Sbjct: 165 PSGEACRSNNNSDVNGRQNDRETDALAGNGNFDIEKWIQGKTFSRDEVSRLLEIIQSRAL 224
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
EPS KVED K SPRSIEKQ+EQP AANRV+KMP EEK+EDLERA WGNLTPHP SS LN
Sbjct: 225 EPSKKVEDNKISPRSIEKQSEQPPAANRVIKMPHEEKKEDLERATWGNLTPHPHSSTLNA 284
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
VGASPVDIARAYMSNRKSE GLLSD +PDDE LL+GDHQMS FIP MSPNPSTCWPGA
Sbjct: 285 VGASPVDIARAYMSNRKSEPGLLSDKIPDDERTLLNGDHQMSKSFIPFMSPNPSTCWPGA 344
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSKLTQLQGD QKFVNT SPLWQQ
Sbjct: 345 MSESQRSYLTPRSQRGRFGTHNFPRTPYSRSIFSKSKSKLTQLQGDTQKFVNTPSPLWQQ 404
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
TPAY QMTSSNDP +EATGSIGP RRL +KA AVTNSRRSAY YPT Q ETKVENSNI
Sbjct: 405 SLTPAYSQMTSSNDPFDEATGSIGPFRRLGRKASAVTNSRRSAYHYPTRQAETKVENSNI 464
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
++ ILPDMKKNLELGGASTIPLS SVGN SS SSLLTVRPQSSQVARTILEHISRNPPTP
Sbjct: 465 SEGILPDMKKNLELGGASTIPLSPSVGNNSSESSLLTVRPQSSQVARTILEHISRNPPTP 524
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQLSDKGKPV 540
KEK EELKRAI WK+TPSS V T KPNET SLA ELDSRQ NQVDQNCHP LS+KGK V
Sbjct: 525 KEKNEELKRAIEWKRTPSSSVQTIKPNETISLAVELDSRQNVNQVDQNCHPTLSNKGKTV 584
Query: 541 STVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAP--KIVPALG 600
ST+ + GR+SDAVNQNSSDL+FRLSNAD K+KDDAGLK+NSS PKD P KIVPALG
Sbjct: 585 STIHLESSAGRNSDAVNQNSSDLRFRLSNADSKYKDDAGLKINSSSPKDFPPKKIVPALG 644
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GTQ+KP SLGTKPGFPSITI KPES W S DS SAFTFPVSGASSGM+SEPPTPS
Sbjct: 645 SEVGTQMKPFSSLGTKPGFPSITIKKPESGWTISPDSGSAFTFPVSGASSGMISEPPTPS 704
Query: 661 IFPSTSLGGSQQHLLKHETAVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
IFPSTS+GGSQ LLK E AVPSYSFGSK+SSPTLVFSF STNS+TI +DASNIKFSFGS
Sbjct: 705 IFPSTSIGGSQPLLLKTENAVPSYSFGSKKSSPTLVFSFPSTNSNTISSDASNIKFSFGS 764
Query: 721 DDYTRLSFGSVGKDA 733
DD+TRLSF SVGKDA
Sbjct: 765 DDHTRLSFSSVGKDA 776
BLAST of Sgr027116.1 vs. ExPASy Swiss-Prot
Match:
Q9CAF4 (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 3.0e-21
Identity = 155/550 (28.18%), Postives = 220/550 (40.00%), Query Frame = 0
Query: 3 RGEERTSWTPYGGGV--GGKVRKPTSRKPPPTPYARPEQNQSQR----------RWLLKL 62
RGE S PYGGG+ GGK RKPT+R+ TPY RP + WL KL
Sbjct: 6 RGE---SSNPYGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKL 65
Query: 63 VDPAYRLITGGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQG 122
VDPA RLIT A RL L K L S P E ++ R VNQ
Sbjct: 66 VDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPE------------RGVNQE 125
Query: 123 VSTLPELPGPSGEANKSENNSDFNGNQKDKENDALA---WIGNFDVENVIRGKKFSRDEV 182
G N S NG + ++ +A G D+E +++GK F+R EV
Sbjct: 126 TKV--------GHKEDVSNLSMKNGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEV 185
Query: 183 SRLLEILQSRALEPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGN 242
RL +L+S+A + S E+++ + P + R P L
Sbjct: 186 DRLTTLLRSKAADSSTMNEEQR---NEVGMVVRHPPSHERDRTHPDNGSMNTLVS----- 245
Query: 243 LTPHPQSSKLNEVGASPVDIARAYMSNRKSET-----GLLSDNVPDDEGALLHGDHQMSM 302
TP L+E ASP +A+AYM +R SE GL +D L
Sbjct: 246 -TPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSMLGLRGQAGREDSVFL------NRT 305
Query: 303 PFIPSMSPNPS-TCWPGAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQ 362
PF P SP S P + G++TPRS RGR +++ RTPYSR +S K+
Sbjct: 306 PF-PQKSPTMSLVTKPSGQRPLENGFVTPRS-RGRSAVYSMARTPYSR---PQSSVKIGS 365
Query: 363 LQGDAQKFVNTSSPLWQQPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRS 422
L + S P + + ++ SS L+ GS+GP+RR+RQK +N
Sbjct: 366 LFQASPSKWEESLPSGSRQGFQSGLKRRSS--VLDNDIGSVGPVRRIRQK----SNLSSR 425
Query: 423 AYFYPTSQQETKVENSNITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQS 482
+ P S+ V + GG T S SS V +S
Sbjct: 426 SLALPVSESPLSVRAN----------------GGEKTTHTSKDSAEDIPGSSFNLVPTKS 485
Query: 483 SQVARTILEHISRNPPTPKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKA 532
S++A IL+ + + T ++ +L ++ S + P +L +KA
Sbjct: 486 SEMASKILQQLDKLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNL-----PEKKA 485
BLAST of Sgr027116.1 vs. ExPASy TrEMBL
Match:
A0A6J1CT79 (nuclear pore complex protein NUP1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014525 PE=4 SV=1)
HSP 1 Score: 1176.4 bits (3042), Expect = 0.0e+00
Identity = 621/738 (84.15%), Postives = 660/738 (89.43%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELRNVN+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELRNVNKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSSKLNE
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSKLNE 240
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
V ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPGA
Sbjct: 241 VVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPGA 300
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQQ
Sbjct: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQQ 360
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
PRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN NI
Sbjct: 361 PRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCNI 420
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPTP
Sbjct: 421 LKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPTP 480
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGKP 540
KEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 KEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGKT 540
Query: 541 VSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALGS 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+GS
Sbjct: 541 VSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIGS 600
Query: 601 EGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPSI 660
E GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPSI
Sbjct: 601 EEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPSI 660
Query: 661 FPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
FPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFGS
Sbjct: 661 FPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFGS 720
Query: 721 DDYTRLSFGSVGKDAGVI 736
+D+TRLSFGSVGKDA +
Sbjct: 721 NDHTRLSFGSVGKDADAV 738
BLAST of Sgr027116.1 vs. ExPASy TrEMBL
Match:
A0A6J1CTW8 (nuclear pore complex protein NUP1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014525 PE=4 SV=1)
HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 621/739 (84.03%), Postives = 660/739 (89.31%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELRNVN+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELRNVNKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSS-KLN 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSS KLN
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSQKLN 240
Query: 241 EVGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPG 300
EV ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPG
Sbjct: 241 EVVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPG 300
Query: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQ 360
AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQ
Sbjct: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQ 360
Query: 361 QPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSN 420
QPRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN N
Sbjct: 361 QPRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCN 420
Query: 421 ITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPT 480
I K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPT
Sbjct: 421 ILKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPT 480
Query: 481 PKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGK 540
PKEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 PKEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGK 540
Query: 541 PVSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALG 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+G
Sbjct: 541 TVSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPS
Sbjct: 601 SEEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFG 720
IFPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFG
Sbjct: 661 IFPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFG 720
Query: 721 SDDYTRLSFGSVGKDAGVI 736
S+D+TRLSFGSVGKDA +
Sbjct: 721 SNDHTRLSFGSVGKDADAV 739
BLAST of Sgr027116.1 vs. ExPASy TrEMBL
Match:
A0A6J1CV22 (nuclear pore complex protein NUP1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014525 PE=4 SV=1)
HSP 1 Score: 1162.9 bits (3007), Expect = 0.0e+00
Identity = 619/739 (83.76%), Postives = 658/739 (89.04%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER ++RTS TPY GGGVGGK+RKPTSRKPPPTPYARPEQNQS RRWL KLVDPAYRLIT
Sbjct: 1 MERADQRTSSTPYGGGGVGGKLRKPTSRKPPPTPYARPEQNQSHRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVE +VSGEDELR N+G S+LP LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEANVSGEDELR--NKGTSSLPGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
P G+ N+SEN SDFNG+QK++END LA NFDVE I+GK FSRDEVS LLEI+QS+AL
Sbjct: 121 PGGKVNRSENKSDFNGHQKERENDVLAGNINFDVEKWIQGKTFSRDEVSHLLEIIQSKAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSS-KLN 240
PSNKVEDKKFSP+SIEKQAEQPSAANRVLKMP +EKQEDLERAMWGNLTPHPQSS KLN
Sbjct: 181 APSNKVEDKKFSPQSIEKQAEQPSAANRVLKMPHQEKQEDLERAMWGNLTPHPQSSQKLN 240
Query: 241 EVGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPG 300
EV ASPVDIARAYMS RKS+T LL D P DE ALLH DHQMS P IPSMSPNPSTCWPG
Sbjct: 241 EVVASPVDIARAYMSGRKSQTSLLPDKTPGDERALLHSDHQMSKPLIPSMSPNPSTCWPG 300
Query: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQ 360
AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLT+LQGDAQKFVNT +PLWQ
Sbjct: 301 AMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTELQGDAQKFVNTPAPLWQ 360
Query: 361 QPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSN 420
QPRT AY QMTSSND L+EATGSIGPIRRLR KA A TNSRRSAYFY +SQ ETKVEN N
Sbjct: 361 QPRTTAYGQMTSSNDSLDEATGSIGPIRRLRHKASAATNSRRSAYFYASSQPETKVENCN 420
Query: 421 ITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPT 480
I K ILPD KKNLELGGAST+PLS+SVGN +S SSLL VRP SSQVARTILEHISRNPPT
Sbjct: 421 ILKGILPDSKKNLELGGASTVPLSYSVGNNNSESSLLIVRPPSSQVARTILEHISRNPPT 480
Query: 481 PKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQL-SDKGK 540
PKEKTEELKRAIAWKK+PS DVHT PN TNSLA ELDSRQKA Q DQNCHPQL SDKGK
Sbjct: 481 PKEKTEELKRAIAWKKSPSPDVHTITPNGTNSLAIELDSRQKAYQGDQNCHPQLMSDKGK 540
Query: 541 PVSTVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAPKIVPALG 600
VSTVLP+E VGRDSDAVNQ+SS+LKFRL +ADL HK DAGLK+NS+ PKD KIVPA+G
Sbjct: 541 TVSTVLPEESVGRDSDAVNQHSSNLKFRLGHADLTHKGDAGLKINSTSPKDVTKIVPAIG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GT+IKPSPSLG KPGFPSITINKPESKWAFSSDS S FTFPVSGASSG LSEPPTPS
Sbjct: 601 SEEGTKIKPSPSLGIKPGFPSITINKPESKWAFSSDSGSGFTFPVSGASSGTLSEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHET-AVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFG 720
IFPSTS+GGSQ LLK ET AV SYSFGSK+SSPTLVFSFSSTNSDTI+TDA NIKFSFG
Sbjct: 661 IFPSTSIGGSQPLLLKPETAAVSSYSFGSKKSSPTLVFSFSSTNSDTIYTDARNIKFSFG 720
Query: 721 SDDYTRLSFGSVGKDAGVI 736
S+D+TRLSFGSVGKDA +
Sbjct: 721 SNDHTRLSFGSVGKDADAV 737
BLAST of Sgr027116.1 vs. ExPASy TrEMBL
Match:
A0A6J1I9W7 (nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470577 PE=4 SV=1)
HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 603/735 (82.04%), Postives = 634/735 (86.26%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER E R S TPY GGGVGGKVRKP SRKPPPTPYARPEQNQ QRRWL KLVDPAYRLIT
Sbjct: 1 MERAEVRASSTPYGGGGVGGKVRKPISRKPPPTPYARPEQNQPQRRWLSKLVDPAYRLIT 60
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALP PGDED D VEAE+ED+ GE ELR NQG STL LPG
Sbjct: 61 GGATRLLPYLFSKSLPSNALPCPGDEDQDHVEAELEDNAPGE-ELR--NQGASTLDGLPG 120
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
PSGEA +S NNSD NG Q D+E DALA GNFD+E I+GK FSRDEVSRLLEI+QSRAL
Sbjct: 121 PSGEACRSNNNSDVNGRQNDRETDALAGNGNFDIEKWIQGKTFSRDEVSRLLEIIQSRAL 180
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
EPS KVED K SPRSIEKQ+EQP AANRV+KMP EEK+EDLERA WGNLTPHP SS LN
Sbjct: 181 EPSKKVEDNKISPRSIEKQSEQPPAANRVIKMPHEEKKEDLERATWGNLTPHPHSSTLNA 240
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
VGASPVDIARAYMSNRKSE GLLSD +PDDE LL+GDHQMS FIP MSPNPSTCWPGA
Sbjct: 241 VGASPVDIARAYMSNRKSEPGLLSDKIPDDERTLLNGDHQMSKSFIPFMSPNPSTCWPGA 300
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSKLTQLQGD QKFVNT SPLWQQ
Sbjct: 301 MSESQRSYLTPRSQRGRFGTHNFPRTPYSRSIFSKSKSKLTQLQGDTQKFVNTPSPLWQQ 360
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
TPAY QMTSSNDP +EATGSIGP RRL +KA AVTNSRRSAY YPT Q ETKVENSNI
Sbjct: 361 SLTPAYSQMTSSNDPFDEATGSIGPFRRLGRKASAVTNSRRSAYHYPTRQAETKVENSNI 420
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
++ ILPDMKKNLELGGASTIPLS SVGN SS SSLLTVRPQSSQVARTILEHISRNPPTP
Sbjct: 421 SEGILPDMKKNLELGGASTIPLSPSVGNNSSESSLLTVRPQSSQVARTILEHISRNPPTP 480
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQLSDKGKPV 540
KEK EELKRAI WK+TPSS V T KPNET SLA ELDSRQ NQVDQNCHP LS+KGK V
Sbjct: 481 KEKNEELKRAIEWKRTPSSSVQTIKPNETISLAVELDSRQNVNQVDQNCHPTLSNKGKTV 540
Query: 541 STVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAP--KIVPALG 600
ST+ + GR+SDAVNQNSSDL+FRLSNAD K+KDDAGLK+NSS PKD P KIVPALG
Sbjct: 541 STIHLESSAGRNSDAVNQNSSDLRFRLSNADSKYKDDAGLKINSSSPKDFPPKKIVPALG 600
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GTQ+KP SLGTKPGFPSITI KPES W S DS SAFTFPVSGASSGM+SEPPTPS
Sbjct: 601 SEVGTQMKPFSSLGTKPGFPSITIKKPESGWTISPDSGSAFTFPVSGASSGMISEPPTPS 660
Query: 661 IFPSTSLGGSQQHLLKHETAVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
IFPSTS+GGSQ LLK E AVPSYSFGSK+SSPTLVFSF STNS+TI +DASNIKFSFGS
Sbjct: 661 IFPSTSIGGSQPLLLKTENAVPSYSFGSKKSSPTLVFSFPSTNSNTISSDASNIKFSFGS 720
Query: 721 DDYTRLSFGSVGKDA 733
DD+TRLSF SVGKDA
Sbjct: 721 DDHTRLSFSSVGKDA 732
BLAST of Sgr027116.1 vs. ExPASy TrEMBL
Match:
A0A6J1I4G8 (nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470577 PE=4 SV=1)
HSP 1 Score: 1125.9 bits (2911), Expect = 0.0e+00
Identity = 603/735 (82.04%), Postives = 634/735 (86.26%), Query Frame = 0
Query: 1 MERGEERTSWTPY-GGGVGGKVRKPTSRKPPPTPYARPEQNQSQRRWLLKLVDPAYRLIT 60
MER E R S TPY GGGVGGKVRKP SRKPPPTPYARPEQNQ QRRWL KLVDPAYRLIT
Sbjct: 45 MERAEVRASSTPYGGGGVGGKVRKPISRKPPPTPYARPEQNQPQRRWLSKLVDPAYRLIT 104
Query: 61 GGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQGVSTLPELPG 120
GGATRLLPYLFSKSLPSNALP PGDED D VEAE+ED+ GE ELR NQG STL LPG
Sbjct: 105 GGATRLLPYLFSKSLPSNALPCPGDEDQDHVEAELEDNAPGE-ELR--NQGASTLDGLPG 164
Query: 121 PSGEANKSENNSDFNGNQKDKENDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRAL 180
PSGEA +S NNSD NG Q D+E DALA GNFD+E I+GK FSRDEVSRLLEI+QSRAL
Sbjct: 165 PSGEACRSNNNSDVNGRQNDRETDALAGNGNFDIEKWIQGKTFSRDEVSRLLEIIQSRAL 224
Query: 181 EPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGNLTPHPQSSKLNE 240
EPS KVED K SPRSIEKQ+EQP AANRV+KMP EEK+EDLERA WGNLTPHP SS LN
Sbjct: 225 EPSKKVEDNKISPRSIEKQSEQPPAANRVIKMPHEEKKEDLERATWGNLTPHPHSSTLNA 284
Query: 241 VGASPVDIARAYMSNRKSETGLLSDNVPDDEGALLHGDHQMSMPFIPSMSPNPSTCWPGA 300
VGASPVDIARAYMSNRKSE GLLSD +PDDE LL+GDHQMS FIP MSPNPSTCWPGA
Sbjct: 285 VGASPVDIARAYMSNRKSEPGLLSDKIPDDERTLLNGDHQMSKSFIPFMSPNPSTCWPGA 344
Query: 301 MSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFVNTSSPLWQQ 360
MSESQR YLTPRSQRGRFG HNFPRTPYSRSIFSKSKSKLTQLQGD QKFVNT SPLWQQ
Sbjct: 345 MSESQRSYLTPRSQRGRFGTHNFPRTPYSRSIFSKSKSKLTQLQGDTQKFVNTPSPLWQQ 404
Query: 361 PRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKVENSNI 420
TPAY QMTSSNDP +EATGSIGP RRL +KA AVTNSRRSAY YPT Q ETKVENSNI
Sbjct: 405 SLTPAYSQMTSSNDPFDEATGSIGPFRRLGRKASAVTNSRRSAYHYPTRQAETKVENSNI 464
Query: 421 TKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQSSQVARTILEHISRNPPTP 480
++ ILPDMKKNLELGGASTIPLS SVGN SS SSLLTVRPQSSQVARTILEHISRNPPTP
Sbjct: 465 SEGILPDMKKNLELGGASTIPLSPSVGNNSSESSLLTVRPQSSQVARTILEHISRNPPTP 524
Query: 481 KEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKANQVDQNCHPQLSDKGKPV 540
KEK EELKRAI WK+TPSS V T KPNET SLA ELDSRQ NQVDQNCHP LS+KGK V
Sbjct: 525 KEKNEELKRAIEWKRTPSSSVQTIKPNETISLAVELDSRQNVNQVDQNCHPTLSNKGKTV 584
Query: 541 STVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDAGLKMNSSWPKDAP--KIVPALG 600
ST+ + GR+SDAVNQNSSDL+FRLSNAD K+KDDAGLK+NSS PKD P KIVPALG
Sbjct: 585 STIHLESSAGRNSDAVNQNSSDLRFRLSNADSKYKDDAGLKINSSSPKDFPPKKIVPALG 644
Query: 601 SEGGTQIKPSPSLGTKPGFPSITINKPESKWAFSSDSSSAFTFPVSGASSGMLSEPPTPS 660
SE GTQ+KP SLGTKPGFPSITI KPES W S DS SAFTFPVSGASSGM+SEPPTPS
Sbjct: 645 SEVGTQMKPFSSLGTKPGFPSITIKKPESGWTISPDSGSAFTFPVSGASSGMISEPPTPS 704
Query: 661 IFPSTSLGGSQQHLLKHETAVPSYSFGSKQSSPTLVFSFSSTNSDTIHTDASNIKFSFGS 720
IFPSTS+GGSQ LLK E AVPSYSFGSK+SSPTLVFSF STNS+TI +DASNIKFSFGS
Sbjct: 705 IFPSTSIGGSQPLLLKTENAVPSYSFGSKKSSPTLVFSFPSTNSNTISSDASNIKFSFGS 764
Query: 721 DDYTRLSFGSVGKDA 733
DD+TRLSF SVGKDA
Sbjct: 765 DDHTRLSFSSVGKDA 776
BLAST of Sgr027116.1 vs. TAIR 10
Match:
AT5G20200.1 (nucleoporin-related )
HSP 1 Score: 303.9 bits (777), Expect = 4.1e-82
Identity = 274/775 (35.35%), Postives = 396/775 (51.10%), Query Frame = 0
Query: 15 GGVGGKVRKPTSRKPPPTPYARPEQNQSQRR-WLLKLVDPAYRLITGGATRLLPYLFSKS 74
GGVGGK+++ ++R+ TPY+RP QNQ QRR W+ ++VDPAYR+I+GGATR+LPY FS +
Sbjct: 22 GGVGGKLKRQSARRHAATPYSRPTQNQVQRRPWISRIVDPAYRIISGGATRILPYFFSNA 81
Query: 75 LPSNALPSPGDEDHDKVEAEVEDDVSGED----ELRNVNQGVSTLPELPGPSGEANKSEN 134
+ AL +P ED ++ + E++++ D + N + S E+ GPSG AN +E
Sbjct: 82 ASAPALAAP-PEDQNQHQGELQNNPQDNDPSVTPISNKPEPASI--EVGGPSGTANVNEG 141
Query: 135 NSDFNGNQKDKE--NDALAWIGNFDVENVIRGKKFSRDEVSRLLEILQSRALEPSNKVED 194
N + ++ K ND +A ++E ++ GK FS+ E+ RL+E++ SRA++ + D
Sbjct: 142 NFSISAQRRGKAALNDDVA---ISELERLMEGKTFSQAEIDRLIEMISSRAID----LPD 201
Query: 195 KKFSPRSIEKQAEQPSAANRVL--KMPREEKQEDLERAMWGNLTPHPQSSKL------NE 254
K R++E + + N L K +D +W TP +S L +E
Sbjct: 202 VKRDERNLEIPLREGAKKNMSLFDKAKEPIGGKDANSEIWATPTPLAKSIILDGDKIRDE 261
Query: 255 VGASPVDIARAYMSNRKSET---GLLSDNVPDD-EGALLHGDHQMSMPFIPSMSPNPSTC 314
VG SP ++A+AYM + S + G ++ N D + ++L G ++ P S PS C
Sbjct: 262 VGLSPAELAKAYMGGQTSSSSSQGFVARNEKDCLDRSMLVGKSSLASP-----SSKPSAC 321
Query: 315 WPGAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQLQGDAQKFV-NTSS 374
WPG S Q G+ TP+S+R +GL NFPRTPYSR+I S SKSKL QLQ D+ K + N S
Sbjct: 322 WPGIKSSEQSGFATPQSRRESYGLQNFPRTPYSRTILSNSKSKLMQLQNDSSKHLSNLQS 381
Query: 375 PLWQQPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRSAYFYPTSQQETKV 434
P Q Y Q++ D G GP RR RQ A T S S Y P S+ ++
Sbjct: 382 P--SQSVERRYGQLSKGRD-----GGLFGPSRRTRQSA---TPSMVSPYSRP-SRGASRF 441
Query: 435 ENSNITKDILPDMKKNLELGGASTIPLSHSV---GNKSSASSLLTVRPQSSQVARTILEH 494
ENS I K+ E G +S + S +K + LTV SSQ+ARTIL+H
Sbjct: 442 ENSAI--------MKSSEAGESSYLSRSQITTYGKHKEAEVGTLTVPTHSSQIARTILDH 501
Query: 495 ISR--NPPTPKEKTEELKRAIAWK--------KTPSSDVHTAKPNETNSLAAELDSRQKA 554
+ R + TPK KT ELK A +W+ + SSDV K + + L ++ +
Sbjct: 502 LERTQSQSTPKNKTAELKLATSWRHPQSSKTVEKSSSDVTNVKKDGSAKLHEDIQNIFSQ 561
Query: 555 NQVDQNCHPQLSDKGKPVS----TVLPKEIVGRDSDAVNQNSSDLKFRLSNADLKHKDDA 614
NQ P + G + T + R + A + + L++ K K
Sbjct: 562 NQPSSVLKPPATTTGDIQNGMNKTASATNGIFRGTQAASSGGNALQYEFG----KPKGSL 621
Query: 615 GLKMN---SSWPKDAPKIVP-ALGSEGGTQIK-PSPSLG-TKPGFPSITINKPESKWAFS 674
M+ + +DA K VP + G E K PS SLG KP PSI++ KP KWA
Sbjct: 622 SRSMHDELGTSSQDAAKAVPYSFGGETANLPKPPSHSLGNNKPVLPSISVAKPFQKWAVP 681
Query: 675 SDSSSAFTFPVSGASSGMLSEPPTPSIFPST------SLGG---SQQHLLKHETAVPSYS 732
S S++ FTFPVS + SEP TPSI P T S GG + H + + +P +S
Sbjct: 682 SGSNAGFTFPVSSSDGTTSSEPTTPSIMPFTTSPPVASGGGVAITNHHEARKDYEIPQFS 741
BLAST of Sgr027116.1 vs. TAIR 10
Match:
AT3G10650.1 (BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). )
HSP 1 Score: 105.5 bits (262), Expect = 2.1e-22
Identity = 155/550 (28.18%), Postives = 220/550 (40.00%), Query Frame = 0
Query: 3 RGEERTSWTPYGGGV--GGKVRKPTSRKPPPTPYARPEQNQSQR----------RWLLKL 62
RGE S PYGGG+ GGK RKPT+R+ TPY RP + WL KL
Sbjct: 6 RGE---SSNPYGGGLGTGGKFRKPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKL 65
Query: 63 VDPAYRLITGGATRLLPYLFSKSLPSNALPSPGDEDHDKVEAEVEDDVSGEDELRNVNQG 122
VDPA RLIT A RL L K L S P E ++ R VNQ
Sbjct: 66 VDPAQRLITYSAQRLFGSLSRKRLGSGETPLQSPEQQKQLPE------------RGVNQE 125
Query: 123 VSTLPELPGPSGEANKSENNSDFNGNQKDKENDALA---WIGNFDVENVIRGKKFSRDEV 182
G N S NG + ++ +A G D+E +++GK F+R EV
Sbjct: 126 TKV--------GHKEDVSNLSMKNGLIRMEDTNASVDPPKDGFTDLEKILQGKTFTRSEV 185
Query: 183 SRLLEILQSRALEPSNKVEDKKFSPRSIEKQAEQPSAANRVLKMPREEKQEDLERAMWGN 242
RL +L+S+A + S E+++ + P + R P L
Sbjct: 186 DRLTTLLRSKAADSSTMNEEQR---NEVGMVVRHPPSHERDRTHPDNGSMNTLVS----- 245
Query: 243 LTPHPQSSKLNEVGASPVDIARAYMSNRKSET-----GLLSDNVPDDEGALLHGDHQMSM 302
TP L+E ASP +A+AYM +R SE GL +D L
Sbjct: 246 -TPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSMLGLRGQAGREDSVFL------NRT 305
Query: 303 PFIPSMSPNPS-TCWPGAMSESQRGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKLTQ 362
PF P SP S P + G++TPRS RGR +++ RTPYSR +S K+
Sbjct: 306 PF-PQKSPTMSLVTKPSGQRPLENGFVTPRS-RGRSAVYSMARTPYSR---PQSSVKIGS 365
Query: 363 LQGDAQKFVNTSSPLWQQPRTPAYVQMTSSNDPLEEATGSIGPIRRLRQKAFAVTNSRRS 422
L + S P + + ++ SS L+ GS+GP+RR+RQK +N
Sbjct: 366 LFQASPSKWEESLPSGSRQGFQSGLKRRSS--VLDNDIGSVGPVRRIRQK----SNLSSR 425
Query: 423 AYFYPTSQQETKVENSNITKDILPDMKKNLELGGASTIPLSHSVGNKSSASSLLTVRPQS 482
+ P S+ V + GG T S SS V +S
Sbjct: 426 SLALPVSESPLSVRAN----------------GGEKTTHTSKDSAEDIPGSSFNLVPTKS 485
Query: 483 SQVARTILEHISRNPPTPKEKTEELKRAIAWKKTPSSDVHTAKPNETNSLAAELDSRQKA 532
S++A IL+ + + T ++ +L ++ S + P +L +KA
Sbjct: 486 SEMASKILQQLDKLVSTREKSPSKLSPSMLRGPALKSLQNVEAPKFLGNL-----PEKKA 485
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144995.1 | 0.0e+00 | 84.15 | nuclear pore complex protein NUP1 isoform X2 [Momordica charantia] | [more] |
XP_022144994.1 | 0.0e+00 | 84.03 | nuclear pore complex protein NUP1 isoform X1 [Momordica charantia] | [more] |
XP_022144996.1 | 0.0e+00 | 83.76 | nuclear pore complex protein NUP1 isoform X3 [Momordica charantia] | [more] |
XP_022971904.1 | 0.0e+00 | 82.04 | nuclear pore complex protein NUP1-like isoform X2 [Cucurbita maxima] | [more] |
XP_022971896.1 | 0.0e+00 | 82.04 | nuclear pore complex protein NUP1-like isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Q9CAF4 | 3.0e-21 | 28.18 | Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana OX=3702 GN=NUP1 PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CT79 | 0.0e+00 | 84.15 | nuclear pore complex protein NUP1 isoform X2 OS=Momordica charantia OX=3673 GN=L... | [more] |
A0A6J1CTW8 | 0.0e+00 | 84.03 | nuclear pore complex protein NUP1 isoform X1 OS=Momordica charantia OX=3673 GN=L... | [more] |
A0A6J1CV22 | 0.0e+00 | 83.76 | nuclear pore complex protein NUP1 isoform X3 OS=Momordica charantia OX=3673 GN=L... | [more] |
A0A6J1I9W7 | 0.0e+00 | 82.04 | nuclear pore complex protein NUP1-like isoform X2 OS=Cucurbita maxima OX=3661 GN... | [more] |
A0A6J1I4G8 | 0.0e+00 | 82.04 | nuclear pore complex protein NUP1-like isoform X1 OS=Cucurbita maxima OX=3661 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G20200.1 | 4.1e-82 | 35.35 | nucleoporin-related | [more] |
AT3G10650.1 | 2.1e-22 | 28.18 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.... | [more] |