Sgr004680 (gene) Monk fruit (Qingpiguo) v1

Overview


Name	Sgr004680
Type	gene
Organism	Siraitia grosvenorii (Monk fruit (Qingpiguo) v1)
Description	Ubiquitin receptor RAD23
Location	tig00003185: 26588 .. 32600 (+)
RNA-Seq Expression	Sgr004680
Synteny	Sgr004680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTCACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTGAGTTATTATCATTATTATTATTGTTTTTTAATTTTTAAATCTGTAATTGATTCCTCGCTTCATGTTTGGTTGCGCACAAGAATGAAAAATGAAACGGTTTGAGATAGAATATCGAATTTTTGTTAGTGCGTTTATGTTCTTTGGTGGATGATTTAAATTGGAGAGGGGGTCTGTGAAATTCTATTTTCCTTGATGTTAGTACCACATAAATATGGCGAATTTTATTGCAAATTGAAGTTTCCTTTAGAGGTTCATCGTTCCACCAATCAAATCAATGGTATTTTAGATTGTTGCATATTGACCAAGTTAATATGCATTTAATGTTTTTTTCTTTTTCCAGATTATTGTTTCTTTAATGTTTTTTTGTTCATTTTGTCTGTTTTTTCGTTAATTGCGTTCTCAGTTATGACTTTTGAAGGAGATGCTGCTGTAACCCATTTTAAATTTCGAAGTTCAATTTCTGCCGAGCACACTAAAATGTCCATTTGAATTTAAGAATCAGCTTTTAGTTTTCATATCAATGCACTATTTGCTTTTCATTGCTTGGAGCAACGATATTCCTAGTTTTTTTTGGTTCAAGCATGGCTTTGTTGTTCTACTTTGTGATTTATTCTAGTCCTCTATTCTCTTCTAACTTCATAGTATTCTATATAGGCTTAGGTCGTCATTGTTTTTTGCTTCTATTATGATCAATCATCAATATTTTAAATGGTCCTTTTAGGAGCTATGCCTAACTTTCAAGTATTCTACATAGGTTTAGGTCGTCAATATTTATTGCTTCCATTATGATCAATCATCAATATTTTAAATGGCCCTTTTAGGAGTTATGCCTAAGGTTGACGTTGACCTTGAGGCGAGGCACAATGTTTTTGCCTCAAGGTTTTTTCGTTTTTGGTTGAGAAGAGGCTTTTGCCTCTTATTAGAAGATGCTAATACCCAAAACGGATTGAAGTTTATAATTTTTGTGCTTCATGCAATGGCTAGAAGAATGATGTCAAATTACTGCCTATTCTTTAAATTACAAAAGTTATTTTAGGTATTTAATACTAATACAACATGGGTTGTGGTTACTTAGCAACATCAGTACTTTTACCACTAAGGCTTAATAAAGCACTGAAGGAAAAAGATAAACTCTAACTTGATCCTATTAGTAATAATAATATTGAAATTTATGTTTAGAATCTTTGTTAAAAGCTACAAACGATTGATGGGCATGAGGATTTTTTCCTTTATACTCTTATACAACCTTCATATTTTATCATACATGATTTTATATTTGTATGGTTTTTATTTGGATTGAGGTTTACGCCGCACCTCTTCAAGAGGAAAAGTGTCGAGGCTGACTTTTAACCTTTTAGAACATAATGGTGTCATTATTATTATTATTTATTTACCTATTCTAGAATTTATACAAGTAGGTGATGGAACTGAAGTCCATCTTGGGAAGACAATGATTGGGCTTGCTCCTGTGGTGTCTTTTTCCAATTTGTCTGCCCCATCCCTTGCTCATCTTCTCTCCATTTCGGAGGTTTTTGTTTGGGACTCTTTTCTTTGGAACTTGTCTTTCAGCCGGCATTTGAGACATGAGGCAAATTAGGATTGTGCATATCTGCAATCTATCTTAGGAAATTATCATCTAATGACCAGGACAACTGGTAGGAGCCAACATGGATTCTTAATAGAAATCTGTTTCTCTGCACCAATCTATTACTCCTCAGTTATTTTAAGTTGAGTTGGAGGTTGAAGGTTACCAAGAATATTCAGGGCTTCGTTTGGATGGTGGCTCTTAGAAGAATTAATACAAATGACGAAATTTAAAAGAGGCACCATCTCACATCCCTTAATCTTCTAAAATACATTCTCCATGAAAGGGAAGGGGAGGACATTGATCACTGGTTTGTCCACTATCACCTTGGCAGGAACTTATACAATAGACTCTGGAACATGTTTGAACTAAGTTGGGTTACTCCCATTTTGGTTGAAGGCATCCCTTTTCATTTAACTTCTGTACGGACTTGTCTAAATTCTTTTGTGGGATGCAGTTTTTGTCACTTTTGTGAAATAGTGAAAGTCAGAGATAGGATTATAATGCCCGAGGGAGATTAAGGTCATGACATTTGGGACTGGTTGTGTATGGTGTGTCTCTAAGTGCCCAAAGATCTCATGACCACTTATATTGGTTAGCTGGAGAGTGGTTTTGTAATATCCCCAATCTGAGGTGGAGTTTGATTCCTAGGTGTCTCTTTAGCACATATGTTTGTGCTATTAATTATATGAATATCTACAGCATTATTTTATGCCATAATATGTTTTTATGAGTTTAACTCCTAGTTCCCCCTACTCTCTATTGGCTTTATTTCTTTAACACATATTTTTGTGCTATTAATTACATGTACAACATTATTTCTGCCATACTTTGTTTTTATGAGAAGTAAATTGTCTATTAAAGAGCTTAACATATGCTGGTGATTCATAAATCATGCTTGAAATGATTAGTTCTTCACAAGTTAAATATCTCTAACATAGAAAGGATTATTGCAATGGTTTTTATTTTTTTGTTTTTATTGAATATTCTACCTTTTGTCCACCTAACTAGGTATTGAGTGTAAAGAAGAACATTGAAGATGTACAAGGAAAAGATAATTATCCTTGTGGTCAGCAATTGTTAATCCATAATGGGAAGGTTTTAAAAGATGAAACAACACTGGCAGAGAACAAGGTTACTGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGGTATGCTGTGTTGTAGCTAACTTGGATATCCTTTAAGAAACTATGAAGCTGCTTTTCTGACTATTATCTTGCATCATATATAAATGGCTATGTTGGACAACTATACAATAATCTTCTTTTTCTATTACGAGAATTGCTGATTAAAATTATCGTAGTATACTATTTGTTATCCATCTTGTGGCTACCAATGGTCTAGTGGCTCTTGATGTCCAACATCTTTTAACATGTGATGTTAACACCCAAGGGTAAGTATTGGAATATGTTTTACTCTTGCATGACAAATATGATATATTGGGTAAAAGATATTTTCATGTTGAGATGTCTTGTGAACGATAACTATATTATGAATAATTCTCTATAGGACACAAGAAAATTTAATTTTGTTGTTGAATATATTCATACAATTCCCTTCATTATTTCAAATGATGTCTTAAAATGTTTGTTTCTGAAAACTATATTTCCTTGAATGCCCAAAACAATGTTGTTCTTTGTGACATAGAAGATGTCGAGATATTGGTTTGATATTTATATTTTCCCAGTTAACATGCCTTAAATATAAGATCAATATGTATACAAGAGTTCTAGATCTTGATTCCATTTTTTAAATCGTTTCTTCATGCTGTAAGTTTGTTATTGGGTTAATCTCTTAATGATAGTTGTTGAGCAGGATGTTATTTCGTAACCAGATGTCTAGTACTCCACTGCTGTAGGTCTTTGGTGAACGTAGAAATCTGAAGTGTAGATCTGCTTGTGGGAAATAGTGTGAACCATTATTTTTATGTTTGATGTTGACTACCTATTTGGTATCAGATAATTTCTTTATTAGTCCCGTGAAAAAGGGAGCAATAGTTCTATAAAAAATTACGGCTTTGCATTCTCAGTAGCCAAATATGTCAATTAAAGGTTTTAAACGTAGTTAAATAAAATCCATAAGAGCTGTCATAAGTTTGGTAATGTCACAGCAAATTAGATGTTATCCATTGATCTCTGAAGAGTTTTGGTTCAGTCATGCGTTTAATTCATTGTCATCACTTTTCTTTTTCTGAGATTCCTGAATTCATATGGTTTTCAATTTGTTTCCTCACTGGGTTTCTCAATTACAGAGTAAAACATTAGGTTCAGCTGGGTCATCATCTACTCAGGTTAAATATTTTTTTATTCATTTTATTTGTGGGCCATTGCATAATTAATACATATTTCTCTCTGAACTGGGTTTTTTATGTTTACTTGACAGACAACTACCAATTTACCAACAACTACTCCAACATCAAATTCTACTTCCACTCCTGAAGCTCCAACACAACCACCGTGAGTTTATTGACGATATGCCAGTTTAGTGTCCCTTCCCCCTTGGCAGCAGATCAGTTAGATAATCCTATATTGTTTGTCTGTTATTGCTTTTGCAGTGCCCCGAGGAATGTTGCTACTTCAGATGTGCCAACAGCAAAGTATGAGCTCTGTTTCTGCTTATTACTGTATCATTTTGTATCTATAATTTGCTACATGCAAGGTTTCTTGATAACTTCAAGAGTTCCTTTACGTGATTAGGTCAAATATTCAAACACAAGTAACATGAGATACCTAATATTTTGTTATACTACAGTGCTCAAATTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAATAATCTCGAGCAGACTATTCAAGATATAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCAGAGCGGGCAGTAGATTACTTGTACTCTGTATGTTTAAACCGCTGCACTGATTGTCGTTTCAGTGTTTTGTCAGATTAGTTACTGGGTGTGGCTTTATATTCAGGGTATTCCAGAAACAGCAGAAGTTGCAGCCCCTGTGGCTCGTGCCCCGACTAGTCAGCCTATAGAAACAGGTGGTGCAACTGCTCCACCTGTTTCTGGAGGTCCTAACTCATCTCCCTTGAATATGTTTCCACAGGTAAAACTTTGGCCTTGGCTTGAAATTTTGTCATTTTTAACCTTTTTTTTTTCTTTTTAAATTCCCATTGAGAGCTAGTGCTTTAGGAGTCCCTTGGTGCTGGTGGTGCTGGTGGAGGAGGTAGCCTTGGATCTCTTGAGTTCCTTAGAAACAATCCACAGGTAATTTTATTTCTCCTCCCCCTTTTCTAAGTTTTTTGTATGACTATAATTTGGTAATGCCTATGGCCTTCTGATAACATTTTTATTGGTTTCACAAATTTTATTATTAAGAATCATTTTGATCAGAACATGTCATTAATCTTTGCTACCAAGCTACTGAGCCGTGGCATTTCCTGTGAAGTCATTGATAATTGAAAAGGTGGTCAGTCAAACTTGAGCATACGGTTGCAAACAATTGAAGGGAAACATTTTAAAAAAATATATATAATAAATATATTACTCTGTAATATGTTTGTGCCATCTTAATCTGGGTGATATGTTTGTGCCTCGGGAGTTCCTTTACGTCGCTTGATGATATGATCTGTTTAGGCTTCCATTTATTTGTTTAATGCTGACAAATTTGACATGTACTGTTACCATCCGCACGAATTTTAGTTCCAAGCATTGCGGTCTATGGTGCAAGCAAATCCTCAAATATTACAGGTCTGTGTTATTTGTTTTTCTTTCTGATTGACTTCAAATTTGTGCATTCTTGTGGCTAGATCTAAGGTTGTGAACTTGGCCTCGGTTTCAGGCCATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCGGTTAATTAATGAGCCTCTCGAGGGTTTTGAAGGGCAAGTCTTCTCATCTGACTTATATTTGTGAATTGAAATTCGAAAGACATGTATCCGAATTTTTGTTTTCTTCCAGGGATCTATTTGATCAGCCTGAACAAGACATGCCTCATGCAATCAATGTCACACCAGCTGAGCAGGAAGCAATCGAACGAGTAAGTTATCTTCATTTAAATATTTCCCCATATCAACCAACAATCTGTTTACCGTCTCACTAGTAAATGTATTGTAGCTGGAAGCAATGGGATTTGATAGAGATCAAGTCATTGAGGCATTTTTAGCTTGTGATCGCAACGAGGAATTGGCAGCCAACTATCTCTTGGAACATGCTGGCGAATTCGAGGATTAA

mRNA sequence

ATGAAGCTCACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTGAGTTATTATCATTATTATTATTGTTTTTTAATTTTTAAATCTGTAATTGATTCCTCGCTTCATGTTTGGTTGCGCACAAGAATGAAAAATGAAACGGTATTGAGTGTAAAGAAGAACATTGAAGATGTACAAGGAAAAGATAATTATCCTTGTGGTCAGCAATTGTTAATCCATAATGGGAAGGTTTTAAAAGATGAAACAACACTGGCAGAGAACAAGGTTACTGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGAGTAAAACATTAGGTTCAGCTGGGTCATCATCTACTCAGACAACTACCAATTTACCAACAACTACTCCAACATCAAATTCTACTTCCACTCCTGAAGCTCCAACACAACCACCTGCCCCGAGGAATGTTGCTACTTCAGATGTGCCAACAGCAAATGCTCAAATTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAATAATCTCGAGCAGACTATTCAAGATATAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCAGAGCGGGCAGTAGATTACTTGTACTCTGGTATTCCAGAAACAGCAGAAGTTGCAGCCCCTGTGGCTCGTGCCCCGACTAGTCAGCCTATAGAAACAGGTGGTGCAACTGCTCCACCTGTTTCTGGAGGTCCTAACTCATCTCCCTTGAATATGTTTCCACAGGAGTCCCTTGGTGCTGGTGGTGCTGGTGGAGGAGGTAGCCTTGGATCTCTTGAGTTCCTTAGAAACAATCCACAGTTCCAAGCATTGCGGTCTATGGTGCAAGCAAATCCTCAAATATTACAGGCCATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCGGTTAATTAATGAGCCTCTCGAGGGTTTTGAAGGGGATCTATTTGATCAGCCTGAACAAGACATGCCTCATGCAATCAATGTCACACCAGCTGAGCAGGAAGCAATCGAACGACTGGAAGCAATGGGATTTGATAGAGATCAAGTCATTGAGGCATTTTTAGCTTGTGATCGCAACGAGGAATTGGCAGCCAACTATCTCTTGGAACATGCTGGCGAATTCGAGGATTAA

Coding sequence (CDS)

ATGAAGCTCACGGTTAAGACCCTCAAAGGAAGTCACTTTCAAATTGAGGTTCAGCCTACAGACACCGTGAGTTATTATCATTATTATTATTGTTTTTTAATTTTTAAATCTGTAATTGATTCCTCGCTTCATGTTTGGTTGCGCACAAGAATGAAAAATGAAACGGTATTGAGTGTAAAGAAGAACATTGAAGATGTACAAGGAAAAGATAATTATCCTTGTGGTCAGCAATTGTTAATCCATAATGGGAAGGTTTTAAAAGATGAAACAACACTGGCAGAGAACAAGGTTACTGAAGATGGTTTTCTTGTTGTTATGCTTAGTAAGAGTAAAACATTAGGTTCAGCTGGGTCATCATCTACTCAGACAACTACCAATTTACCAACAACTACTCCAACATCAAATTCTACTTCCACTCCTGAAGCTCCAACACAACCACCTGCCCCGAGGAATGTTGCTACTTCAGATGTGCCAACAGCAAATGCTCAAATTGATACATATGGACAAGCTGCTTCAAATTTAGTTTCTGGAAATAATCTCGAGCAGACTATTCAAGATATAATGGATATGGGTGGTGGCAACTGGGACAGAGAAACAGTTACTCGTGCGCTTCGAGCAGCCTATAATAATCCAGAGCGGGCAGTAGATTACTTGTACTCTGGTATTCCAGAAACAGCAGAAGTTGCAGCCCCTGTGGCTCGTGCCCCGACTAGTCAGCCTATAGAAACAGGTGGTGCAACTGCTCCACCTGTTTCTGGAGGTCCTAACTCATCTCCCTTGAATATGTTTCCACAGGAGTCCCTTGGTGCTGGTGGTGCTGGTGGAGGAGGTAGCCTTGGATCTCTTGAGTTCCTTAGAAACAATCCACAGTTCCAAGCATTGCGGTCTATGGTGCAAGCAAATCCTCAAATATTACAGGCCATGCTTCAGGAGCTTGGGAAGCAGAACCCTCAGCTTTTGAGATTAATCCAGGATCATCAAGCAGAGTTTCTCCGGTTAATTAATGAGCCTCTCGAGGGTTTTGAAGGGGATCTATTTGATCAGCCTGAACAAGACATGCCTCATGCAATCAATGTCACACCAGCTGAGCAGGAAGCAATCGAACGACTGGAAGCAATGGGATTTGATAGAGATCAAGTCATTGAGGCATTTTTAGCTTGTGATCGCAACGAGGAATTGGCAGCCAACTATCTCTTGGAACATGCTGGCGAATTCGAGGATTAA

Protein sequence

MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSSTQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED

Homology

[Close]

BLAST of Sgr004680 vs. NCBI nr
Match: XP_008443453.1 (PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo])

HSP 1 Score: 652.1 bits (1681), Expect = 3.1e-183
Identity = 348/407 (85.50%), Postives = 357/407 (87.71%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIE+VQGKD+YPCGQQLLIHNGKVLKDETTL ENK+TEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTTTPT NSTS PEAPTQP A RNVA SDVPTANAQIDTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGG+WDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVAR PTSQP
Sbjct: 181 EQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IE GGATAPPVSGGPNSSPLNMFPQESL A   GGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. NCBI nr
Match: XP_022150127.1 (ubiquitin receptor RAD23b-like [Momordica charantia])

HSP 1 Score: 652.1 bits (1681), Expect = 3.1e-183
Identity = 353/410 (86.10%), Postives = 363/410 (88.54%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQP+D                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPSD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKV+ DGFLVVMLSKSKT+GSAGSSS
Sbjct: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVSGDGFLVVMLSKSKTVGSAGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAP--TQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGN 180
           TQTTTN PTTTPTSNSTSTPEAP  TQPPA R+VATSDVPT NAQIDTYGQAASNLVSGN
Sbjct: 121 TQTTTNAPTTTPTSNSTSTPEAPTQTQPPASRDVATSDVPTTNAQIDTYGQAASNLVSGN 180

Query: 181 NLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTS 240
           NLEQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPET EVAAPVAR PTS
Sbjct: 181 NLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETTEVAAPVARPPTS 240

Query: 241 QPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGA-GGGGSLGSLEFLRNNPQFQALRSM 300
           QP+ETGGATA PVSG PNSSPLNMFPQESLGA  A GGGGSLGSLEFLRNNPQFQALRSM
Sbjct: 241 QPMETGGATATPVSGAPNSSPLNMFPQESLGATAAGGGGGSLGSLEFLRNNPQFQALRSM 300

Query: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAI 360
           VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAI
Sbjct: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAI 360

Query: 361 NVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           NVTPAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGE+ED
Sbjct: 361 NVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEYED 377

[Close]

BLAST of Sgr004680 vs. NCBI nr
Match: XP_038905754.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])

HSP 1 Score: 646.7 bits (1667), Expect = 1.3e-181
Identity = 348/407 (85.50%), Postives = 356/407 (87.47%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIE+VQGKD+YPCGQQLLIHNGKVLKDETTL ENKVTEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKVTEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTTTPT N TS P+APTQP A RNVA SDVPTANAQIDTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTTPTPNPTSIPQAPTQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVAR PTSQP
Sbjct: 181 EQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IETGGATA PVSGGPNSSPLNMFPQESL A   GGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IETGGATA-PVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 373

[Close]

BLAST of Sgr004680 vs. NCBI nr
Match: KAG7017735.1 (Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 645.6 bits (1664), Expect = 2.9e-181
Identity = 343/407 (84.28%), Postives = 353/407 (86.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QG D+YPCGQQLLIHNGKVLKDETTL+ENKVTEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLSENKVTEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTTTPT NST  PEAP QP A RNVATSDVPTAN Q+DTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVATSDVPTANTQVDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPE AE+AAPVAR P+SQP
Sbjct: 181 EQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IETGG TAPP SGGPNSSPLNMFPQESL A  AGGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IETGGVTAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQPEQDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEA+GFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. NCBI nr
Match: XP_023527347.1 (ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023527348.1 ubiquitin receptor RAD23b-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023527350.1 ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 645.6 bits (1664), Expect = 2.9e-181
Identity = 343/407 (84.28%), Postives = 353/407 (86.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QG D+YPCGQQLLIHNGKVLKDETTL+ENKVTEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLSENKVTEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+P TTPT NSTS PEAP QP A RNVATSDVPTAN Q+DTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPITTPTPNSTSIPEAPAQPAASRNVATSDVPTANTQVDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPE AE+AAPVAR P+SQP
Sbjct: 181 EQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IETGG TAPP SGGPNSSPLNMFPQESL A  AGGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IETGGVTAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQPEQDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEA+GFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 481.9 bits (1239), Expect = 7.3e-135
Identity = 273/417 (65.47%), Postives = 317/417 (76.02%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V P+D                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QGKDNYPCGQQLLIHNGKVLKDET+L ENKVTE+GFLVVMLSKSK+ GSAG +S
Sbjct: 61  KNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTA--------NAQIDTYGQAAS 180
            QT++    + P S +TS+    T+P AP    +S VP +         AQ DTYGQAAS
Sbjct: 121 VQTSS---VSQPVSATTSS----TKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAAS 180

Query: 181 NLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPV 240
            LVSG++LEQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIP+TAEVA PV
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV 240

Query: 241 ARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQ 300
              P +Q   +G A   P SGGPNSSPL++FPQE++ A G+   G LG+LEFLRNN QFQ
Sbjct: 241 ---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGS---GDLGTLEFLRNNDQFQ 300

Query: 301 ALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGF--EGDLFDQPE 360
            LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL+L+NEP EG   EGD+FDQPE
Sbjct: 301 QLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPE 360

Query: 361 QDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           Q+MPHAINVTPAEQEAI+RLEAMGFDR  VIEAFLACDRNEELAANYLLE++G+FED
Sbjct: 361 QEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 457.6 bits (1176), Expect = 1.5e-127
Identity = 263/412 (63.83%), Postives = 303/412 (73.54%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V PTD                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED Q KDNYPCGQQLLIHNGKVLKDETTL ENKVTE+GFLVVMLSKSKT  SAG SS
Sbjct: 61  KNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASSAGPSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQP---PAPRNVATSDVPTANAQIDTYGQAASNLVSG 180
           TQ T+   TT+  S++T    + TQ    PA  +    + PT  AQ DTYGQAAS LVSG
Sbjct: 121 TQPTST--TTSTISSTTLAAPSTTQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSG 180

Query: 181 NNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPT 240
           +++EQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIPET  + A       
Sbjct: 181 SSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATNLSGVG 240

Query: 241 SQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSM 300
           S        TAPP SGGPNSSPL++FPQE++       GG LG+LEFLR N QFQ LRSM
Sbjct: 241 S----GRELTAPPPSGGPNSSPLDLFPQEAV---SDAAGGDLGTLEFLRGNDQFQQLRSM 300

Query: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEG--DLFDQPEQDMPH 360
           V +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL+L+NEP EG +G  D+FDQP+Q+MPH
Sbjct: 301 VNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPH 360

Query: 361 AINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           ++NVTP EQE+IERLEAMGFDR  VIEAFL+CDRNEELAANYLLEH+ +FED
Sbjct: 361 SVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 369.4 bits (947), Expect = 5.3e-101
Identity = 234/457 (51.20%), Postives = 282/457 (61.71%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MK+ VKTLKG+HF+IEV+P D                                 +V+ VK
Sbjct: 1   MKIFVKTLKGTHFEIEVKPED---------------------------------SVVDVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIE VQG D YP  +Q+LIH GKVLKDETT+ ENKV E+ F+V+M++KSK   +A SS+
Sbjct: 61  KNIESVQGADVYPAAKQMLIHQGKVLKDETTIEENKVAENSFIVIMMNKSKPASAAASSA 120

Query: 121 TQTTTNL----PTT--------TPTSNSTSTPEAPTQPPAPRNVAT-------------- 180
           +  T+      P+T        TP S S     APT+PP P    T              
Sbjct: 121 SAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATETVTTPI 180

Query: 181 --------------SDVPTANAQIDTYGQAASNLVSGNNLEQTIQDIMDMGGGNWDRETV 240
                          D     +Q D YGQAASNL +G+NLE TIQ I+DMGGG WDRETV
Sbjct: 181 PEPVPATISSSTPAPDSAPVGSQGDVYGQAASNLAAGSNLESTIQQILDMGGGTWDRETV 240

Query: 241 TRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTS------QPIETGGATAPPVSGG 300
             ALRAA+NNPERAV+YLY+GIPE AEV  PVAR P S       P +T    A P S G
Sbjct: 241 VLALRAAFNNPERAVEYLYTGIPEQAEV-PPVARPPASAGQPANPPAQTQQPAAAPAS-G 300

Query: 301 PNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGK 360
           PN++PL++FPQ   G    GG    G+L+FLRN+ QFQALR+MVQANPQ+LQ MLQELGK
Sbjct: 301 PNANPLDLFPQ---GLPNVGGNPGAGTLDFLRNSQQFQALRAMVQANPQVLQPMLQELGK 360

Query: 361 QNPQLLRLIQDHQAEFLRLINEPLE--GFEGDLFDQPEQDM--PHAINVTPAEQEAIERL 408
           QNP L+RLIQDHQA+FLRLINEP+E  G  G+L  Q    M  P AI VT  E+EAIERL
Sbjct: 361 QNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERL 419

[Close]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 368.6 bits (945), Expect = 9.0e-101
Identity = 226/418 (54.07%), Postives = 276/418 (66.03%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MK+ VKTL GS+F+IEV+P D VS                                  VK
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVS---------------------------------DVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
             IE V+G + YP  +Q+LIH GKVLKDETTL EN V E+ F+V+MLSK+K   S   +S
Sbjct: 61  TAIETVKGAE-YPAAKQMLIHQGKVLKDETTLEENNVVENSFIVIMLSKTK--ASPSGAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQ--PPAPRNVATSDVP--TANAQIDTYGQAASNLVS 180
           T +      T P + +T    APT   P      AT+  P   A+ Q D YGQAASNLV+
Sbjct: 121 TASAPAPSATQPQTVATPQVSAPTASVPVPTSGTATAAAPATAASVQTDVYGQAASNLVA 180

Query: 181 GNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAP 240
           G  LE T+Q I+DMGGG+WDR+TV RALRAA+NNPERAV+YLYSGIP  AE+  PVA+AP
Sbjct: 181 GTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEI-PPVAQAP 240

Query: 241 -----TSQPIETGGATAPP--VSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNP 300
                 + P+      A P   +GGPN++PLN+FPQ   G   A  G   G+L+FLRN+ 
Sbjct: 241 ATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQ---GMPAADAGAGAGNLDFLRNSQ 300

Query: 301 QFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQP 360
           QFQALR+MVQANPQILQ MLQELGKQNPQL+RLIQ+HQA+FLRLINEP+EG E ++ +Q 
Sbjct: 301 QFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEG-EENVMEQL 360

Query: 361 EQDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           E  MP A+ VTP E+EAIERLE MGFDR  V+E F AC++NEELAANYLL+H  EFED
Sbjct: 361 EAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377

[Close]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 332.0 bits (850), Expect = 9.3e-90
Identity = 208/423 (49.17%), Postives = 263/423 (62.17%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MK++VKTLKGS FQIEV                      DS+           + V  VK
Sbjct: 1   MKISVKTLKGSTFQIEV----------------------DSA-----------QKVADVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           + IE  QG+  YP  QQ+LIH GKVLKD+TTL ENKV E+ FLV+ML + K   S+  ++
Sbjct: 61  RIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLRQGKGSSSSAPAT 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATS-DVPTANA----------QIDTYGQ 180
           ++  +N    T T  +    +AP  P     V  S   PTA A          + D YGQ
Sbjct: 121 SKAPSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASPAPAVAVSSEADNYGQ 180

Query: 181 AASNLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVA 240
           A SNLV+G+NLE TIQ I++MGGG WDR+ V  AL AA+NNPERAV+YLYSG+PE  ++ 
Sbjct: 181 ATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIP 240

Query: 241 APVARAPTSQPIETGGATAPP----VSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFL 300
            P      + P +   AT P     +S GPN+SPL++FPQ    A     G  LG+L+ L
Sbjct: 241 VPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAG--LGNLDAL 300

Query: 301 RNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEG-FEGD 360
           RNN QF+ L S+VQANPQILQ +LQELGKQNPQ+L+LIQ++QAEFL LINEP EG  E +
Sbjct: 301 RNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEEN 360

Query: 361 LFDQPEQDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGE 408
           L DQ  + MP  I VTP E EAI RLEAMGFDR  V++ F AC+++E+LAANYLL+H  E
Sbjct: 361 LLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNE 388

[Close]

BLAST of Sgr004680 vs. ExPASy TrEMBL
Match: A0A1S3B8V4 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.5e-183
Identity = 348/407 (85.50%), Postives = 357/407 (87.71%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIE+VQGKD+YPCGQQLLIHNGKVLKDETTL ENK+TEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIENVQGKDSYPCGQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTTTPT NSTS PEAPTQP A RNVA SDVPTANAQIDTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTTPTPNSTSIPEAPTQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGG+WDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVAR PTSQP
Sbjct: 181 EQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IE GGATAPPVSGGPNSSPLNMFPQESL A   GGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IEAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. ExPASy TrEMBL
Match: A0A6J1D9V5 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111018382 PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.5e-183
Identity = 353/410 (86.10%), Postives = 363/410 (88.54%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQP+D                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPSD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKV+ DGFLVVMLSKSKT+GSAGSSS
Sbjct: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVSGDGFLVVMLSKSKTVGSAGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAP--TQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGN 180
           TQTTTN PTTTPTSNSTSTPEAP  TQPPA R+VATSDVPT NAQIDTYGQAASNLVSGN
Sbjct: 121 TQTTTNAPTTTPTSNSTSTPEAPTQTQPPASRDVATSDVPTTNAQIDTYGQAASNLVSGN 180

Query: 181 NLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTS 240
           NLEQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPET EVAAPVAR PTS
Sbjct: 181 NLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETTEVAAPVARPPTS 240

Query: 241 QPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGA-GGGGSLGSLEFLRNNPQFQALRSM 300
           QP+ETGGATA PVSG PNSSPLNMFPQESLGA  A GGGGSLGSLEFLRNNPQFQALRSM
Sbjct: 241 QPMETGGATATPVSGAPNSSPLNMFPQESLGATAAGGGGGSLGSLEFLRNNPQFQALRSM 300

Query: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAI 360
           VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAI
Sbjct: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAI 360

Query: 361 NVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           NVTPAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGE+ED
Sbjct: 361 NVTPAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEYED 377

[Close]

BLAST of Sgr004680 vs. ExPASy TrEMBL
Match: A0A0A0LCV4 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.0e-180
Identity = 343/407 (84.28%), Postives = 353/407 (86.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIE+VQGKD+YPC QQLLIHNGKVLKDETTL ENK+TEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIENVQGKDSYPCSQQLLIHNGKVLKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTT +PTTTPT NSTS PEAP QP A RNVA SDVPTANAQIDTYGQAASNLVSGNNL
Sbjct: 121 TQTTTIVPTTTPTPNSTSIPEAPAQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGG+WDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVAR PT QP
Sbjct: 181 EQTIQEIMDMGGGSWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARPPTGQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           I+ GGATAPPVSGGPNSSPLNMFPQESL A   GGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IDAGGATAPPVSGGPNSSPLNMFPQESLAAAAGGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQP+QDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPDQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. ExPASy TrEMBL
Match: A0A6J1J0D2 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 3.5e-180
Identity = 340/407 (83.54%), Postives = 353/407 (86.73%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QG D+YPCGQQLLIHNGKVLKD+TTL+ENKVTEDGFLVVMLSKSK  GS+GSSS
Sbjct: 61  KNIEDAQGTDSYPCGQQLLIHNGKVLKDDTTLSENKVTEDGFLVVMLSKSKAPGSSGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTT PT NST  PEAP QP A RNVATSDVPTAN Q+DTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTIPTPNSTLIPEAPAQPAASRNVATSDVPTANTQVDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPE AE+AAPVAR P+SQP
Sbjct: 181 EQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSMVQA 300
           IETGG TAPP SGGPNSSPLNMFPQESL A  AGGGGSLGSLEFLRNNPQFQALRSMVQA
Sbjct: 241 IETGGVTAPPTSGGPNSSPLNMFPQESLAAAAAGGGGSLGSLEFLRNNPQFQALRSMVQA 300

Query: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAINVT 360
           NPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQPEQDMPHAINVT
Sbjct: 301 NPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAINVT 360

Query: 361 PAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           PAEQ+AIERLEA+GFDR+QVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 PAEQQAIERLEALGFDREQVIEAFLACDRNEELAANYLLEHGGEFED 374

[Close]

BLAST of Sgr004680 vs. ExPASy TrEMBL
Match: A0A6J1F959 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 4.2e-178
Identity = 342/409 (83.62%), Postives = 352/409 (86.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHFQIEVQPTD                                 TVL VK
Sbjct: 1   MKLTVKTLKGSHFQIEVQPTD---------------------------------TVLGVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QG D+YPCGQQLLIHNGKVLKDETTL+ENKVTEDGFLVVMLSKSK  GS GSSS
Sbjct: 61  KNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLSENKVTEDGFLVVMLSKSKAPGSTGSSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTANAQIDTYGQAASNLVSGNNL 180
           TQTTTN+PTTTPT NST  PEAP QP A RNVATSDVPTAN Q+DTYGQAASNLVSGNNL
Sbjct: 121 TQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVATSDVPTANTQVDTYGQAASNLVSGNNL 180

Query: 181 EQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPTSQP 240
           EQTIQ+IMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPE AE+AAPVAR P+SQP
Sbjct: 181 EQTIQEIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEIAAPVARPPSSQP 240

Query: 241 IETGGATAPPVSGGPNSSPLNMFPQESL--GAGGAGGGGSLGSLEFLRNNPQFQALRSMV 300
           IETGG TA P SGGPNSSPLNMFPQESL   A  AGGGGSLGSLEFLRNNPQFQALRSMV
Sbjct: 241 IETGGVTA-PTSGGPNSSPLNMFPQESLAAAAAAAGGGGSLGSLEFLRNNPQFQALRSMV 300

Query: 301 QANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEGDLFDQPEQDMPHAIN 360
           QANPQILQAMLQELGKQNPQLLRLIQDHQAEFL+LINEPLEGFEGDLFDQPEQDMPHAIN
Sbjct: 301 QANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQLINEPLEGFEGDLFDQPEQDMPHAIN 360

Query: 361 VTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           VTPAEQ+AIERLEA+GFDRDQVIEAFLACDRNEELAANYLLEH GEFED
Sbjct: 361 VTPAEQQAIERLEALGFDRDQVIEAFLACDRNEELAANYLLEHGGEFED 375

[Close]

BLAST of Sgr004680 vs. TAIR 10
Match: AT1G79650.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 481.9 bits (1239), Expect = 5.2e-136
Identity = 273/417 (65.47%), Postives = 317/417 (76.02%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V P+D                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QGKDNYPCGQQLLIHNGKVLKDET+L ENKVTE+GFLVVMLSKSK+ GSAG +S
Sbjct: 61  KNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTA--------NAQIDTYGQAAS 180
            QT++    + P S +TS+    T+P AP    +S VP +         AQ DTYGQAAS
Sbjct: 121 VQTSS---VSQPVSATTSS----TKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAAS 180

Query: 181 NLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPV 240
            LVSG++LEQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIP+TAEVA PV
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV 240

Query: 241 ARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQ 300
              P +Q   +G A   P SGGPNSSPL++FPQE++ A G+   G LG+LEFLRNN QFQ
Sbjct: 241 ---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGS---GDLGTLEFLRNNDQFQ 300

Query: 301 ALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGF--EGDLFDQPE 360
            LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL+L+NEP EG   EGD+FDQPE
Sbjct: 301 QLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPE 360

Query: 361 QDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           Q+MPHAINVTPAEQEAI+RLEAMGFDR  VIEAFLACDRNEELAANYLLE++G+FED
Sbjct: 361 QEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 371

[Close]

BLAST of Sgr004680 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-135
Identity = 272/417 (65.23%), Postives = 313/417 (75.06%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V P+D                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QGKDNYPCGQQLLIHNGKVLKDET+L ENKVTE+GFLVVMLSKSK+ GSAG +S
Sbjct: 61  KNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTA--------NAQIDTYGQAAS 180
            Q         P S +TS+    T+P AP    +S VP +         AQ DTYGQAAS
Sbjct: 121 VQ---------PVSATTSS----TKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAAS 180

Query: 181 NLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPV 240
            LVSG++LEQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIP+TAEVA PV
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV 240

Query: 241 ARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQ 300
              P +Q   +G A   P SGGPNSSPL++FPQE++ A G+   G LG+LEFLRNN QFQ
Sbjct: 241 ---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGS---GDLGTLEFLRNNDQFQ 300

Query: 301 ALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGF--EGDLFDQPE 360
            LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL+L+NEP EG   EGD+FDQPE
Sbjct: 301 QLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPE 360

Query: 361 QDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           Q+MPHAINVTPAEQEAI+RLEAMGFDR  VIEAFLACDRNEELAANYLLE++G+FED
Sbjct: 361 QEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 365

[Close]

BLAST of Sgr004680 vs. TAIR 10
Match: AT1G79650.4 (Rad23 UV excision repair protein family )

HSP 1 Score: 472.6 bits (1215), Expect = 3.1e-133
Identity = 273/441 (61.90%), Postives = 317/441 (71.88%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V P+D                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QGKDNYPCGQQLLIHNGKVLKDET+L ENKVTE+GFLVVMLSKSK+ GSAG +S
Sbjct: 61  KNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVP---------------------- 180
            QT++    + P S +TS+    T+P AP    +S VP                      
Sbjct: 121 VQTSS---VSQPVSATTSS----TKPAAPSTTQSSPVPASPIPAQEQPAVYAFVFSFAGL 180

Query: 181 ----------TANAQIDTYGQAASNLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAY 240
                      + AQ DTYGQAAS LVSG++LEQ +Q IM+MGGG+WD+ETVTRALRAAY
Sbjct: 181 AFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAY 240

Query: 241 NNPERAVDYLYSGIPETAEVAAPVARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESL 300
           NNPERAVDYLYSGIP+TAEVA PV   P +Q   +G A   P SGGPNSSPL++FPQE++
Sbjct: 241 NNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETV 300

Query: 301 GAGGAGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQA 360
            A G+   G LG+LEFLRNN QFQ LR+MV +NPQILQ MLQELGKQNPQLLRLIQ++QA
Sbjct: 301 AAAGS---GDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQA 360

Query: 361 EFLRLINEPLEGF--EGDLFDQPEQDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLA 408
           EFL+L+NEP EG   EGD+FDQPEQ+MPHAINVTPAEQEAI+RLEAMGFDR  VIEAFLA
Sbjct: 361 EFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLA 395

[Close]

BLAST of Sgr004680 vs. TAIR 10
Match: AT1G16190.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 457.6 bits (1176), Expect = 1.0e-128
Identity = 263/412 (63.83%), Postives = 303/412 (73.54%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V PTD                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED Q KDNYPCGQQLLIHNGKVLKDETTL ENKVTE+GFLVVMLSKSKT  SAG SS
Sbjct: 61  KNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASSAGPSS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQP---PAPRNVATSDVPTANAQIDTYGQAASNLVSG 180
           TQ T+   TT+  S++T    + TQ    PA  +    + PT  AQ DTYGQAAS LVSG
Sbjct: 121 TQPTST--TTSTISSTTLAAPSTTQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSG 180

Query: 181 NNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPVARAPT 240
           +++EQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIPET  + A       
Sbjct: 181 SSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIPATNLSGVG 240

Query: 241 SQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQALRSM 300
           S        TAPP SGGPNSSPL++FPQE++       GG LG+LEFLR N QFQ LRSM
Sbjct: 241 S----GRELTAPPPSGGPNSSPLDLFPQEAV---SDAAGGDLGTLEFLRGNDQFQQLRSM 300

Query: 301 VQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGFEG--DLFDQPEQDMPH 360
           V +NPQILQ MLQELGKQNPQLLRLIQ++QAEFL+L+NEP EG +G  D+FDQP+Q+MPH
Sbjct: 301 VNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPH 360

Query: 361 AINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           ++NVTP EQE+IERLEAMGFDR  VIEAFL+CDRNEELAANYLLEH+ +FED
Sbjct: 361 SVNVTPEEQESIERLEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFED 368

[Close]

BLAST of Sgr004680 vs. TAIR 10
Match: AT1G79650.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 442.6 bits (1137), Expect = 3.5e-124
Identity = 258/417 (61.87%), Postives = 300/417 (71.94%), Query Frame = 0


Query: 1   MKLTVKTLKGSHFQIEVQPTDTVSYYHYYYCFLIFKSVIDSSLHVWLRTRMKNETVLSVK 60
           MKLTVKTLKGSHF+I V P+D                                 T+++VK
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSD---------------------------------TIMAVK 60

Query: 61  KNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLAENKVTEDGFLVVMLSKSKTLGSAGSSS 120
           KNIED QGKDNYPCGQQLLIHNGKVLKDET+L ENKVTE+GFLVVMLSKSK+ GSAG +S
Sbjct: 61  KNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQAS 120

Query: 121 TQTTTNLPTTTPTSNSTSTPEAPTQPPAPRNVATSDVPTA--------NAQIDTYGQAAS 180
            QT++    + P S +TS+    T+P AP    +S VP +         AQ DTYGQAAS
Sbjct: 121 VQTSS---VSQPVSATTSS----TKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAAS 180

Query: 181 NLVSGNNLEQTIQDIMDMGGGNWDRETVTRALRAAYNNPERAVDYLYSGIPETAEVAAPV 240
            LVSG++LEQ +Q IM+MGGG+WD+ETVTRALRAAYNNPERAVDYLYSGIP+TAEVA PV
Sbjct: 181 TLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV 240

Query: 241 ARAPTSQPIETGGATAPPVSGGPNSSPLNMFPQESLGAGGAGGGGSLGSLEFLRNNPQFQ 300
              P +Q   +G A   P SGGPNSSPL++FPQE++ A G+   G LG+LEFLRNN    
Sbjct: 241 ---PEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGS---GDLGTLEFLRNND--- 300

Query: 301 ALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLRLINEPLEGF--EGDLFDQPE 360
                            QELGKQNPQLLRLIQ++QAEFL+L+NEP EG   EGD+FDQPE
Sbjct: 301 -----------------QELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPE 351

Query: 361 QDMPHAINVTPAEQEAIERLEAMGFDRDQVIEAFLACDRNEELAANYLLEHAGEFED 408
           Q+MPHAINVTPAEQEAI+RLEAMGFDR  VIEAFLACDRNEELAANYLLE++G+FED
Sbjct: 361 QEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 351

The following BLAST results are available for this feature:

BLAST of Sgr004680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443453.1	3.1e-183	85.50	PREDICTED: ubiquitin receptor RAD23b-like [Cucumis melo] >XP_008443454.1 PREDICT...	[more]
XP_022150127.1	3.1e-183	86.10	ubiquitin receptor RAD23b-like [Momordica charantia]	[more]
XP_038905754.1	1.3e-181	85.50	ubiquitin receptor RAD23b-like [Benincasa hispida]	[more]
KAG7017735.1	2.9e-181	84.28	Ubiquitin receptor RAD23b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023527347.1	2.9e-181	84.28	ubiquitin receptor RAD23b-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02352...	[more]

BLAST of Sgr004680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L33	7.3e-135	65.47	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	1.5e-127	63.83	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]
Q84L31	5.3e-101	51.20	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q84L30	9.0e-101	54.07	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q40742	9.3e-90	49.17	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of Sgr004680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8V4	1.5e-183	85.50	Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103487042 PE=3 SV=1	[more]
A0A6J1D9V5	1.5e-183	86.10	Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111018382 PE=3 SV=...	[more]
A0A0A0LCV4	2.0e-180	84.28	Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G829030 PE=3 SV=1	[more]
A0A6J1J0D2	3.5e-180	83.54	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482316 PE=3 SV=1	[more]
A0A6J1F959	4.2e-178	83.62	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441956 PE=3 SV=1	[more]

BLAST of Sgr004680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79650.1	5.2e-136	65.47	Rad23 UV excision repair protein family	[more]
AT1G79650.2	1.2e-135	65.23	Rad23 UV excision repair protein family	[more]
AT1G79650.4	3.1e-133	61.90	Rad23 UV excision repair protein family	[more]
AT1G16190.1	1.0e-128	63.83	Rad23 UV excision repair protein family	[more]
AT1G79650.3	3.5e-124	61.87	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Monk fruit (Qingpiguo) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 309..329
None	No IPR available	GENE3D	1.10.8.10		coord: 173..223 e-value: 2.7E-21 score: 77.1
None	No IPR available	GENE3D	3.10.20.90		coord: 1..110 e-value: 4.3E-24 score: 86.1
None	No IPR available	GENE3D	1.10.8.10		coord: 354..402 e-value: 1.7E-24 score: 87.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..141
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..23 coord: 51..406
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 51..406
None	No IPR available	PANTHER	PTHR10621:SF32	UBIQUITIN RECEPTOR RAD23A-RELATED	coord: 1..23
None	No IPR available	CDD	cd14379	UBA1_Rad23_plant	coord: 174..223 e-value: 4.77656E-30 score: 108.083
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..107 e-value: 1.4613E-25 score: 96.8574
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 308..330 score: 63.04 coord: 357..373 score: 66.04 coord: 374..388 score: 58.18 coord: 389..404 score: 62.22
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 52..406 e-value: 3.7E-117 score: 389.7
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 363..400 e-value: 1.9E-9 score: 47.4 coord: 180..220 e-value: 1.8E-4 score: 30.8
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 363..398 e-value: 6.7E-13 score: 48.2 coord: 180..218 e-value: 1.2E-14 score: 53.9
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 361..401 score: 16.281944
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 178..221 score: 12.570991
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 280..323 e-value: 1.3E-8 score: 44.6
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 34..108 e-value: 2.8E-9 score: 46.8
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 52..109 e-value: 7.2E-11 score: 41.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 53..112 score: 13.075337
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 272..337 e-value: 1.3E-27 score: 97.2
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 279..344
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 282..337 e-value: 2.9E-23 score: 81.4
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 345..404
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 176..228
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 52..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sgr004680.1	Sgr004680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding