Sgr023302.1 (mRNA) Monk fruit (Qingpiguo) v1

Overview
NameSgr023302.1
TypemRNA
OrganismSiraitia grosvenorii (Monk fruit (Qingpiguo) v1)
DescriptionUnknown protein
Locationtig00000892: 2015633 .. 2017710 (+)
Sequence length657
RNA-Seq ExpressionSgr023302.1
SyntenySgr023302.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCATGAAGAACATGATCCCTCATTACAAAGTTCTCCCAATTCCTTGTACGTGCATCTTGTATTGGGTGGCTCAGATGAATTCACAGTTTCACCTGAACACGCAAATTACTACTTGAGTAGTGGATCTTCCTTGCTATTGGAAATGGGATTTGTGTCTTTCATAGTATTGACTTATTGAGATTTGATCTTTTACAGAACTTTCAATTCTTTTTTGTTTGTTTGTTTTTTTTTTTTTGCTTTTGTTTTTTTTTTTTGTGTGTGTGTTTTACACTGTGCAGCAAGTAGTACCTGGTGACAGTATGCACAAAAGGTATGGGCATGGATCGTTTGGCTCTCGTCTTTCTAGCTGCAAACACATAGTTAGAACGAACTTCTACCCAAGTGTAAATGCTAACGATTTCCATGTTAAAAGGTAAAGTATTTACCTCAAATAGGATAGGATGTGTATCTGGAAGTTCATAGCTGCATCACAGAAAAAGAAAATTACTTCTACAATAAAGCATTATGTCGGTAGCAATTAGTTTCTTTCTAATATATGTTTTAGAAGAATACTGCATTTCCAAACCTAATGTATATTATATCAAATTCTCCCCACCCCCACTCCCCAGGTGCTTAAATTTTTATCAAAAACTAGTGTATGCTTAAAGTGACATTTTATAACTCAGATACAATAACTTCACCCAGTAAACAGTGGCATATAACTCAATTTGCAGCTATCTGTTTTGTTAGTTGTTGAAATAATCAGGGGCTATTTTTGTTTGCCAATATGTACAGTCTAAACTTAATGCTTCAAGGCATACTTACACTTGATGCTCTGTCCTCAAGCGGTCTATATGCTTCAGTTTGCGCATTGGGATGGAAGCAACTTTGGTGTGCAAAGGAACCAAAGCTCTAGTAATGTTACAGTCCATGCAGTTCTGCGAAGTTGTTGTAAATTGTCCGGAGCTTAGTCTGATTATAGGAACATCATCAGAATCATACTCGCATAAATCTTCGATGTCTGTCAGTGGTGATTCAGCATACGCAGGTTCAGGTGATTGAGGTTCTTCAACGATAGGTTCACAATTGATGGTTTGGTTTCTTGATCCCAAAAATGGATTGCCCTCAATATGGAGCATTGATACTGGATTCATCACTTGAGCAGTGCCTTCAAAATCTTTGTCTGGGACCATTGAACTTACCATTCTTTTCTCTGCTAATCCAGGTAATGCAAGCCTTGCACTGTTTTAATTATAGGACCTCAGATAAAGAATAGAATTGCACAACCTATAAATCTCTATAATTTGCACAAAAACTCTTCTCAAAATTTGGCTTCCATAAATTTTTGTTCTAATCATTTTTAACTTTCCTACGACAAAATCAACCTTTTTCACATGGAATGGGAAAATGTAGGGTCAGTGAGTTATAATTTCTTATTGCTTTAATTGGAGGCAGCAAAAATGAGTTTTGAATCCTTCAAATATGTTTTATGCACTAATTGATCCATACCTTGCATATGCGCTGGCATAGTGCCGACATTCCCCCCTTAGTGGACAAGCGTTACAGTTTGGTTTTCTTTTCGTGCAAAAGACCTGATAAAAGTTCAAGATAGATCATCAAATACTTTACTTGAAATGTTTCATACCCAGATCATGATGATGCTTTAACAATATATGCTTGGAAAGAGGTTATGATTTACCTTTCCAAATGTTATAAGTTGATAGTGTAGTTCATACCTGTTGTAAAAACCTGGATGTGTCAACTTTTGCTTATTGATGGACGTTTTGAAGTACATAGTTATTTTAACAATAGTAAATAATAGAAAGGTGTTTAGGATTACAGAGTTCGTTGGTCAAGCGTACATAGCCTTGGCCACAGATATTTCTGAATAGAATCCATCATAGGGAACCTGCACAAAAGACATCTTAGCCTCTATTTGTTGGTCATATGAATGATGCTTCTGTTTAATATTCTGTACTTACGTCTCAAGAAGATGTATTTGAACCTCCTCAGGCAGCGGCTCAAGAGGAACCCATCCTAGTCGAACTGCGATTCGACCGACGTTTATGTCCACCTTATTTAAGGAACAAATAG

mRNA sequence

ATGTTGCATGAAGAACATGATCCCTCATTACAAAGTTCTCCCAATTCCTTGTACGTGCATCTTGTATTGGGTGGCTCAGATGAATTCACAGTTTCACCTGAACACGCAAATTACTACTTGAGTAGTGGATCTTCCTTGCTATTGGAAATGGGATTTGTGTCTTTCATACAAGTAGTACCTGGTGACAGTATGCACAAAAGGTATGGGCATGGATCGTTTGGCTCTCGTCTTTCTAGCTGCAAACACATAGTTAGAACGAACTTCTACCCAAGTGTAAATGCTAACGATTTCCATGTTAAAAGTTTGCGCATTGGGATGGAAGCAACTTTGGTGTGCAAAGGAACCAAAGCTCTAGTAATGTTACAGTCCATGCAGTTCTGCGAAGTTGTTGTAAATTGTCCGGAGCTTAGTCTGATTATAGGAACATCATCAGAATCATACTCGCATAAATCTTCGATGTCTGTCAGTGGTGATTCAGCATACGCAGGTTCAGTGCCTTCAAAATCTTTGTCTGGGACCATTGAACTTACCATTCTTTTCTCTGCTAATCCAGAAGATGTATTTGAACCTCCTCAGGCAGCGGCTCAAGAGGAACCCATCCTAGTCGAACTGCGATTCGACCGACGTTTATGTCCACCTTATTTAAGGAACAAATAG

Coding sequence (CDS)

ATGTTGCATGAAGAACATGATCCCTCATTACAAAGTTCTCCCAATTCCTTGTACGTGCATCTTGTATTGGGTGGCTCAGATGAATTCACAGTTTCACCTGAACACGCAAATTACTACTTGAGTAGTGGATCTTCCTTGCTATTGGAAATGGGATTTGTGTCTTTCATACAAGTAGTACCTGGTGACAGTATGCACAAAAGGTATGGGCATGGATCGTTTGGCTCTCGTCTTTCTAGCTGCAAACACATAGTTAGAACGAACTTCTACCCAAGTGTAAATGCTAACGATTTCCATGTTAAAAGTTTGCGCATTGGGATGGAAGCAACTTTGGTGTGCAAAGGAACCAAAGCTCTAGTAATGTTACAGTCCATGCAGTTCTGCGAAGTTGTTGTAAATTGTCCGGAGCTTAGTCTGATTATAGGAACATCATCAGAATCATACTCGCATAAATCTTCGATGTCTGTCAGTGGTGATTCAGCATACGCAGGTTCAGTGCCTTCAAAATCTTTGTCTGGGACCATTGAACTTACCATTCTTTTCTCTGCTAATCCAGAAGATGTATTTGAACCTCCTCAGGCAGCGGCTCAAGAGGAACCCATCCTAGTCGAACTGCGATTCGACCGACGTTTATGTCCACCTTATTTAAGGAACAAATAG

Protein sequence

MLHEEHDPSLQSSPNSLYVHLVLGGSDEFTVSPEHANYYLSSGSSLLLEMGFVSFIQVVPGDSMHKRYGHGSFGSRLSSCKHIVRTNFYPSVNANDFHVKSLRIGMEATLVCKGTKALVMLQSMQFCEVVVNCPELSLIIGTSSESYSHKSSMSVSGDSAYAGSVPSKSLSGTIELTILFSANPEDVFEPPQAAAQEEPILVELRFDRRLCPPYLRNK
Homology
[Close]
BLAST of Sgr023302.1 vs. NCBI nr
Match: KAG7035956.1 (hypothetical protein SDJN02_02756, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-14
Identity = 58/99 (58.59%), Postives = 69/99 (69.70%), Query Frame = 0 

Query: 89  YPSVNANDFHVKSLRIGMEATLVCKGTKALVMLQSMQFCEVVVNCPELSLIIGTSSESYS 148
           + +V  +  H KSLRIGMEATL+ KG KA VML SMQFCEVV   PE SLI GTSSESYS
Sbjct: 47  FEAVPGDHMH-KSLRIGMEATLLFKGIKAPVMLLSMQFCEVVTR-PESSLITGTSSESYS 106

Query: 149 HKSSMSVSGDSAYAGSVPSKSLSGTIELTILFSANPEDV 188
           +KSSMSV  DS+YA SVP+     T  + + FS   +D+
Sbjct: 107 YKSSMSVDCDSSYACSVPTFGPQRT-SIAVWFSLRAKDL 142

[Close]
BLAST of Sgr023302.1 vs. NCBI nr
Match: KAG6606007.1 (hypothetical protein SDJN03_03324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-07
Identity = 54/161 (33.54%), Postives = 69/161 (42.86%), Query Frame = 0 

Query: 2   LHEEHDPSLQSSPNSLYVHLVLGGSDEFTVSPEHANYYLSSGSSLLLEMGFVSFIQVVPG 61
           +++EHDPSLQSSP S YVH V                         L++      + VPG
Sbjct: 12  MNDEHDPSLQSSPVSWYVHFV-------------------------LDLNVYRIFEAVPG 71

Query: 62  DSMHKRYGHGSFGSRLSSCKHIVRTNFYPSVNANDFHVKSLRIGMEATLVCKGTKALVML 121
           D MH                                  KSLRIGMEATL+ KG KA VML
Sbjct: 72  DHMH----------------------------------KSLRIGMEATLLFKGIKAPVML 113

Query: 122 QSMQFCEVVVNCPELSLIIGTSSESYSHKSSMSVSGDSAYA 163
            SMQFCEVV      S ++ +  +S     SM  +G+++ A
Sbjct: 132 LSMQFCEVVTRPESSSQLMVSYLDSEDGLPSMWSTGNASLA 113

The following BLAST results are available for this feature:
BLAST of Sgr023302.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7035956.14.3e-1458.59hypothetical protein SDJN02_02756, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6606007.13.9e-0733.54hypothetical protein SDJN03_03324, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Sgr023302.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr023302.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sgr023302.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Sgr023302Sgr023302gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Sgr023302.1.exon1Sgr023302.1.exon1exon
Sgr023302.1.exon2Sgr023302.1.exon2exon
Sgr023302.1.exon3Sgr023302.1.exon3exon
Sgr023302.1.exon4Sgr023302.1.exon4exon
Sgr023302.1.exon5Sgr023302.1.exon5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Sgr023302.1cds.Sgr023302.1CDS
cds.Sgr023302.1cds.Sgr023302.1_2CDS
cds.Sgr023302.1cds.Sgr023302.1_3CDS
cds.Sgr023302.1cds.Sgr023302.1_4CDS
cds.Sgr023302.1cds.Sgr023302.1_5CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Sgr023302.1Sgr023302.1-proteinpolypeptide