Spg029665.1 (mRNA) Sponge gourd (cylindrica) v1

Overview
NameSpg029665.1
TypemRNA
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting 41
Locationscaffold2: 23447147 .. 23452053 (-)
Sequence length933
RNA-Seq ExpressionSpg029665.1
SyntenySpg029665.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGTTTGTTTCTAAAATTCGAAAAATGGAACGTTCAACAACATGGTAGGGCTAGGTGGATAGAAAGTTTTGGAGGATGGATCAAAATCAAGAATTTACCTCTCTCTTTATGGAATAAGGAAAATTTTGAAGCCATAGGCAAGGAATGTGGTGGGCTCATTAGTATTTCATTGGAAACAATTAAGTTGATGACTTGCTATGAAGCTTCCATTGATGTGAAAAAGAATCAATGCGGATTCATTCCAGCCGAAGTTGTTGTTCATGATTCCATTCTTGGGGATGTTGTGGTCCAAATCTTTCCTTCAGTTGGATTTGGATCTTCTTCTAGGTCTGAATTTTTGAGCATCATGACTTTAGATTGGTTTTATATTCCTTGGATATTTCACGTGCCAAGGAAGTGAAGAAAGATGATCTCATCATCTTTTAGTGAAGAAAGATGTTAATCTTAATGTTACGGCTTCCAATATGAAGGAGATGGAAGGCTTGCATGATCATCATCACTTAATGAAGTCTGGGAAGATGAAGGAGTTCCTACTTTTTACAAGGTTCATGAATTAATTAGGCTGGTTGTTGAAAATTGAATTGATAATTGGAAGGCTATGGATCCAGAACCTTCAGCAAATCTCATTCCTTTTGTCTCTCACGAAAAGTCCTTTCTTCTTAGCCCTCCCCCAAGCATTTATGACCTTTCTGTCCCACCTACCGAAGTTAATGCTTTTATTGGCCAAGGTATGCATGAACAACCTCTTTTATTGCAACAAGATTCGTTTTAACCCTCCTTATGAACCGTCCACCCCTTTTAATGAGCCCATTAATGTCATTTCATTTGCTGCATTATGTGAGGATACTAGTAAGGATGTATTGGTGATGTATTGGAAATAGGGGTAGAATATTAGTGAGGGCATAATAGTAATTAGTGGTGGTGTCTTGTTTATAAAAAGGGGAGTTAGGGTTCTTAGAAGGGGGATTTTTGGTTTTGTAGTATTGTCCATTGTGGGACTTTAGGAGAGACATAGCCCTCTTGAAAGACAATTGATATTCTATGTTCCCTTTGATATTGCAACATATTAGTATTTCGTGTTCTCTGTGTTCGGGTACCTAACAAATTGGTATCAGAGTGGGTTCATCTTGGGAGCAATGGATCATGATCGTGTGCTAGAGTTATTGTTAAAGGTACAAAAATCAATGACAGAAATGCAACAAATTTTGAAAGAAACTGAAAGATGGTTGGAGGATTTCAATCGGCAAAGATGGAGAGAGATCAGAAAAAAAGAAGAAGATGACAAAGTGAACCGTAAAATGGTCGAGGAATTCCAAAAGTGTTTTTGAGTAAGGGATCATTGAAAGAGCAAGAGAATATCGATCCTCAACTAGGGGATGGGTGTCTGAACGATGGAAGTTACGCAGGAAAAATGGAAAAATCGAGGAACGGAAATGGGAGGACAAGATTCCGATGAGTATATCAGATGAGCAAGAATGTCGGCAAGCGAAGAAGTGGCATAAATAATGGACGACTCCGACGATGGGAATTTCACAAGGAAGAGTAAGAAAAGGTTGAGAGGGAAGGGAGGAAAAAATACGTGTTGTCGGTCACATGGTCCGAAAAGCGAGAAGGCGGGGGGATGAACAAGCGACAGAGGAAGAACTTGCCGGCGGTCACATGTCTGGAAAGGCAAGGTGGCTAGTGGAGGAAGGACTTACAACAAGTGGGTTGGCACCAACAACAAGATGGCGGCGGTGGAAGGCTAAGCGACAGAGGAAAAGCATTCCGTGGATATGGCTAGGGTTACATCGCAGAAAAAATCCATTATTTGGGTGTGGGTTAAAGAGGCCCAAACAGGCCCCCAATTTAATACAATGGGAAAACATATATTTCAATCAATAATGGAGGGAAGGAGAAAGTCTAGGTTTAGTGGTGGGCTAGTACTGGGTTTAGGGCAGCAAGTAAACTATGGGCTTAGCCCATTAGAGAAAAACCAAATTTATGTTAAAGAATTTTCCGGGGCTAGACACCTCAACTTTTGGAAAAATCGCCACTTCCTCCCCCTTCCAATTAAATCTCCTTAAACAAAGATACTGAGGGTTGCTGTTTTGATAAACCTATGCAGAAGCTCACATATTGGAGAACAAGATCAAATAGCTGATGGATCGTAACGACAAATTTTGGGCCAGCAATCAAGAAAATTTATGGAAGCCAGGGAACAATATGCTCATTTGGAGCTCTGCACCTTATGTCCATCTTGGTGCGAACTAACAGAAAAGGATTATCGAGGAGGGGCTTTTCTGTTTAGGAAGGTTGGCAACACATTAGTAGATAGGGAAGGGAGCCTCTTTCTTTAGTGGGGTTTCCTTTTGTGGGCTTGTTTTTTTTTTTTTTTGATGCCCTTGTATTCTTTCATTCTTTCTCAATGAAAGTTGGCTTTTATCTAAAAAAAAAAAAAAAAAAAGCTGTTCGGGCATCCATCTTCTTAGGAATAACTTAAGAAGCATGGACACTTTAGTTTGGCTAGCGTGTCTATGTCCAACATGTATTGGACACTTGGACACTCTGACACTTGTTGGACTCGTATCGAACACTTGTTAGCACAATTGATATGTGACAAACACTAGTTGTAGGTTCATTTCGAACCCTTGTTAAGTATACTAAATAGACGCAATGCTTAAATAACAAAAATAATAAATTTGAAGAGTAAAATACATTAAATTCATTTTTTCAAGCATACAAATACATCAACTTATTGATTTTGAATTTCCTTCTGGTATAAAAACGATATATATTTTAAAAAATGTATATTTTTCTTAACGTGTCCATGTTGTGTCCGTGTCCTAGATTTTTAAAAAATGACGTGTCACTGTGTCCGTGTCGTGTCGTATCCATGCTTCTTAAATCAGCCAAATGTATACTAGCACAAGATTTTTAATGTGTTCTAATTTTATTTTTGTACAAGTTCTTAGTGACTTGTTCAAATTAGTTCAAATTGTACTCCTGGTACTACGAATTTAGAGCTTTGGATTAGTTCATGAGAAATCATAGACCTTCTTTCTCACTTGAAATGAATGAGTATATTATTTTGTTACAGTTCCTGATTTAATTATTTTAAAACCATGGATATGCTGTTTCTTCTGTCTAAGTGCGTTTGCGAGTGAATGGTATCAGTCTTTTATTCTGTCTGTTATTTATAGTTTTTCTTCTATTTCCTTATTCCTCTTATGTGTTCCATATGTTAAAGCATGACCATCTGCTTCTGTATTTTATGATTGCGTTAGGCGCCTGCTCATTGTTCTTCATGAAGGTGCTGGTTACTCCCTTTGATGTGTTATTGTTATCTTACTTGTGTAAATCTCTTTCAAGTAGGGAAATGCCCAAAGACCAGAAGTTCGTATTGTAACATGGAACAATGATGAATTATCTACCGATGCCCTACCTGTACATGGTTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCACATGCTCCTTTTGCAGGTTAATTTATCTATGGATGAATATTATTTTTTTAGTACAAGGTGAATTGCCTTAAATGTTCAAATAATTCTTTATGTCAGTGTAGGCAGCAGCTATGCTGGTGGTCAGTGGGCTGCTGGTGATGAACCTCTATACTATATTGTATCCCCAAAAGACGTAGTTATTGCGAAGCCTAGGTTAGTTTTTAATCAGTGTTGTTTTTGTTGTAGTATATATGTGAATGTAGGAACTTATTAGTCTTTTGTTCTTTATTGTAATTTTACTATTACTAGTCCATGTATGCCTATATAATATGTGTATGATTCTCCTATATTTGGTCTCACATATCATGGTATCATCGATGTTTTATGAAACAAGAAACGGAATTTTTCATTGAAAAAATGAAAAGAGACTAATTCTCAAAGAATGCAACTTCCACAAGGGAGGGAAGAAGAATACAACAATAAAAACAAGACCAAGCTAGACCAAATTGAGAGAACAAAGTACAAACCATAAGAAAAAGAAAAACTTGAAGAGAAAACCAGTCGAAAAGGAGCTCTAAGAAAAGGACTTGAGATGGGCAACTACGGGCTTGTTTGATAATGTTCTCGTTTCCTGTTTCTCGTTTCTTGTTTCCTGTTTTTTGTTTCTTGTTTTTTAAGAACTAAAAATAGAAACATGTTTGATAACTATTTCTGTTTCTTGTTTCTCTAAAAAAAGAAACTGAAATAGATGTGTTTGATAACTGTTTCTCGTTTCTTGATTTTTAGTTGAAATAAAATTTGGTACATATAATATAAAAATTATATATAACATACATTAAAATTATAGTTAGAGGTTGCCGGTGGCGGTTGGTCGACGGAGGTCGGTAGTCGAAGGTCGACCGTGGCAGTCGGTTGGCAGAGGCCAGTTAGCAAAGGTCGAGGGCGGCCGGTAGTCAGAGGTTGACGGTGGCAGTTGGTAGTTGGAGGTCAACGGTGGTGGCCGGTAGACGGAGGTCGACAGTGGCGGTCGGTCGACAGAGGCCGGTTAGCGGAGGTCGACGGCGGTCGGTAGTCGGAGGTCAACGGGGGTGGTTGGTTGGCGGAGGCTGGCGGTAGCCGGTAGTCGGAGGTCGACAGTGGCGGTCGGTCGACGGAGGTTGGCGGCGACCTATAGTCAGAGGTCGACGTTGGTGGCCGATAGTCGTAGGTCGACGGTGGCGGTTAGTTGGCAGAGGCCGGTCAGCGGAGGTCGACGGCGGCCGGTAGTCGAAGGTCGATGGTGGCGGTTGGTCAGCGGAGGTCGGTGGTACGGCGGCCGGTAGTCAGAGGTCGACGGTGGCAGTCGATTGGCAGAGGTTGGCGAAAGCTTATATTCGGAGGTCGATGGTGGCGGTTGATTGGCGGTGGTCGGTAGTCGGAGGTTGGCGGTGGCGGTTGGTCGACGGCCGGTAG

mRNA sequence

ATGGGAGGTTTGTTTCTAAAATTCGAAAAATGGAACGTTCAACAACATGGTAGGGCTAGGTGGATAGAAAGTTTTGGAGGATGGATCAAAATCAAGAATTTACCTCTCTCTTTATGGAATAAGGAAAATTTTGAAGCCATAGGCAAGGAATGTGGTGGGCTCATTAGTATTTCATTGGAAACAATTAAGTTGATGACTTGCTATGAAGCTTCCATTGATGTGAAAAAGAATCAATGCGGATTCATTCCAGCCGAAGTTGTTGTTCATGATTCCATTCTTGGGGATGTTGTGGCTATGGATCCAGAACCTTCAGCAAATCTCATTCCTTTTGTCTCTCACGAAAAGTCCTTTCTTCTTAGCCCTCCCCCAAGCATTTATGACCTTTCTGTCCCACCTACCGAAGTTAATGCTTTTATTGGCCAAGGCGCCTGCTCATTGTTCTTCATGAAGGGAAATGCCCAAAGACCAGAAGTTCGTATTGTAACATGGAACAATGATGAATTATCTACCGATGCCCTACCTGTACATGGTTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCACATGCTCCTTTTGCAGGCAGCAGCTATGCTGGTGGTCAGTGGGCTGCTGGTGATGAACCTCTATACTATATTGTATCCCCAAAAGACGTAGTTATTGCGAAGCCTAGTCAGAGGTTGACGGTGGCAGTTGGTAGTTGGAGGTCAACGGTGGTGGCCGGTAGACGGAGGTCGACAGTGGCGGTCGGTCGACAGAGGCCGGTTAGCGGAGCGGAGGTCGGTGGTACGGCGGCCGGTAGTCAGAGGTCGACGGTGGCAGTCGATTGGCAGAGGTTGGCGAAAGCTTATATTCGGAGGTCGATGGTGGCGGTTGATTGGCGGTGGTCGGTAGTCGGAGGTTGGCGGTGGCGGTTGGTCGACGGCCGGTAG

Coding sequence (CDS)

ATGGGAGGTTTGTTTCTAAAATTCGAAAAATGGAACGTTCAACAACATGGTAGGGCTAGGTGGATAGAAAGTTTTGGAGGATGGATCAAAATCAAGAATTTACCTCTCTCTTTATGGAATAAGGAAAATTTTGAAGCCATAGGCAAGGAATGTGGTGGGCTCATTAGTATTTCATTGGAAACAATTAAGTTGATGACTTGCTATGAAGCTTCCATTGATGTGAAAAAGAATCAATGCGGATTCATTCCAGCCGAAGTTGTTGTTCATGATTCCATTCTTGGGGATGTTGTGGCTATGGATCCAGAACCTTCAGCAAATCTCATTCCTTTTGTCTCTCACGAAAAGTCCTTTCTTCTTAGCCCTCCCCCAAGCATTTATGACCTTTCTGTCCCACCTACCGAAGTTAATGCTTTTATTGGCCAAGGCGCCTGCTCATTGTTCTTCATGAAGGGAAATGCCCAAAGACCAGAAGTTCGTATTGTAACATGGAACAATGATGAATTATCTACCGATGCCCTACCTGTACATGGTTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCACATGCTCCTTTTGCAGGCAGCAGCTATGCTGGTGGTCAGTGGGCTGCTGGTGATGAACCTCTATACTATATTGTATCCCCAAAAGACGTAGTTATTGCGAAGCCTAGTCAGAGGTTGACGGTGGCAGTTGGTAGTTGGAGGTCAACGGTGGTGGCCGGTAGACGGAGGTCGACAGTGGCGGTCGGTCGACAGAGGCCGGTTAGCGGAGCGGAGGTCGGTGGTACGGCGGCCGGTAGTCAGAGGTCGACGGTGGCAGTCGATTGGCAGAGGTTGGCGAAAGCTTATATTCGGAGGTCGATGGTGGCGGTTGATTGGCGGTGGTCGGTAGTCGGAGGTTGGCGGTGGCGGTTGGTCGACGGCCGGTAG

Protein sequence

MGGLFLKFEKWNVQQHGRARWIESFGGWIKIKNLPLSLWNKENFEAIGKECGGLISISLETIKLMTCYEASIDVKKNQCGFIPAEVVVHDSILGDVVAMDPEPSANLIPFVSHEKSFLLSPPPSIYDLSVPPTEVNAFIGQGACSLFFMKGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPSQRLTVAVGSWRSTVVAGRRRSTVAVGRQRPVSGAEVGGTAAGSQRSTVAVDWQRLAKAYIRRSMVAVDWRWSVVGGWRWRLVDGR
Homology
[Close]
BLAST of Spg029665.1 vs. NCBI nr
Match: THG23021.1 (hypothetical protein TEA_004890 [Camellia sinensis var. sinensis])

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-35
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0 

Query: 138 FIGQGACSLFFMKGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSS 197
           F+ Q A  L  + GNAQRPEV +VTWNNDEL+TDALPVHGFEHYKAKDY+LAHAPF+GSS
Sbjct: 8   FLSQ-AARLGTLSGNAQRPEVCVVTWNNDELATDALPVHGFEHYKAKDYALAHAPFSGSS 67

Query: 198 YAGGQWAAGDEPLYYIVSPKDVVIAKPSQRLT 230
           YAGGQWAAGDEPLYYIVSPKDVVIAKPS R T
Sbjct: 68  YAGGQWAAGDEPLYYIVSPKDVVIAKPSGRAT 98

[Close]
BLAST of Spg029665.1 vs. NCBI nr
Match: KAG7029825.1 (Vacuolar protein sorting-associated protein 41-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 4.8e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP
Sbjct: 294 QGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 353

Query: 210 LYYIVSPKDVVIAKP 225
           LYY+VSPKDVVIAKP
Sbjct: 354 LYYVVSPKDVVIAKP 368

[Close]
BLAST of Spg029665.1 vs. NCBI nr
Match: KAG6586007.1 (Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.5 bits (402), Expect = 4.8e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP
Sbjct: 396 QGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 455

Query: 210 LYYIVSPKDVVIAKP 225
           LYY+VSPKDVVIAKP
Sbjct: 456 LYYVVSPKDVVIAKP 470

[Close]
BLAST of Spg029665.1 vs. NCBI nr
Match: KAG5577896.1 (hypothetical protein H5410_058030 [Solanum commersonii])

HSP 1 Score: 159.5 bits (402), Expect = 4.8e-35
Identity = 71/78 (91.03%), Postives = 76/78 (97.44%), Query Frame = 0 

Query: 147 FFMKGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAG 206
           F  +GNAQRPEVR+VTWNNDEL+TDALPVHGFEHYKAKDYSLAHAPF+GSSYAGGQWAAG
Sbjct: 25  FIQQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAG 84

Query: 207 DEPLYYIVSPKDVVIAKP 225
           DEPLYYIVSPKDV+IAKP
Sbjct: 85  DEPLYYIVSPKDVIIAKP 102

[Close]
BLAST of Spg029665.1 vs. NCBI nr
Match: XP_022938247.1 (vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata] >XP_022938248.1 vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata] >XP_022938249.1 vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata] >XP_022938251.1 vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata] >XP_022938252.1 vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata])

HSP 1 Score: 159.5 bits (402), Expect = 4.8e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP
Sbjct: 323 QGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 382

Query: 210 LYYIVSPKDVVIAKP 225
           LYY+VSPKDVVIAKP
Sbjct: 383 LYYVVSPKDVVIAKP 397

[Close]
BLAST of Spg029665.1 vs. ExPASy Swiss-Prot
Match: P93231 (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum OX=4081 GN=VPS41 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-37
Identity = 71/75 (94.67%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVR+VTWNNDEL+TDALPVHGFEHYKAKDYSLAHAPF+GSSYAGGQWAAGDEP
Sbjct: 321 QGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEP 380

Query: 210 LYYIVSPKDVVIAKP 225
           LYYIVSPKDVVIAKP
Sbjct: 381 LYYIVSPKDVVIAKP 395

[Close]
BLAST of Spg029665.1 vs. ExPASy Swiss-Prot
Match: P93043 (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana OX=3702 GN=VPS41 PE=1 SV=3)

HSP 1 Score: 152.5 bits (384), Expect = 7.7e-36
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPE+RIV+WNNDEL+ DALPVHGFEHYKAKDYSLAHAPF GSSYAGGQWAAGDEP
Sbjct: 327 QGNAQRPEIRIVSWNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEP 386

Query: 210 LYYIVSPKDVVIAKP 225
           LYYIVSPKDVVIAKP
Sbjct: 387 LYYIVSPKDVVIAKP 401

[Close]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match: A0A4S4F0T0 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004890 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35
Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0 

Query: 138 FIGQGACSLFFMKGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSS 197
           F+ Q A  L  + GNAQRPEV +VTWNNDEL+TDALPVHGFEHYKAKDY+LAHAPF+GSS
Sbjct: 8   FLSQ-AARLGTLSGNAQRPEVCVVTWNNDELATDALPVHGFEHYKAKDYALAHAPFSGSS 67

Query: 198 YAGGQWAAGDEPLYYIVSPKDVVIAKPSQRLT 230
           YAGGQWAAGDEPLYYIVSPKDVVIAKPS R T
Sbjct: 68  YAGGQWAAGDEPLYYIVSPKDVVIAKPSGRAT 98

[Close]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match: A0A6J1I1J7 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita maxima OX=3661 GN=LOC111468604 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP
Sbjct: 327 QGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 386

Query: 210 LYYIVSPKDVVIAKP 225
           LYY+VSPKDVVIAKP
Sbjct: 387 LYYVVSPKDVVIAKP 401

[Close]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match: A0A6J1FDJ3 (Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita moschata OX=3662 GN=LOC111444390 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.3e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP
Sbjct: 323 QGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 382

Query: 210 LYYIVSPKDVVIAKP 225
           LYY+VSPKDVVIAKP
Sbjct: 383 LYYVVSPKDVVIAKP 397

[Close]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match: A0A2N9IW62 (Vacuolar protein sorting-associated protein 41 homolog OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57014 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-35
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPF+GSSYAGGQWAAGDEP
Sbjct: 323 RGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEP 382

Query: 210 LYYIVSPKDVVIAKP 225
           LYYIVSPKDVVIAKP
Sbjct: 383 LYYIVSPKDVVIAKP 397

[Close]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match: A0A1S2YKR7 (Vacuolar protein sorting-associated protein 41 homolog OS=Cicer arietinum OX=3827 GN=LOC101492342 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.2e-35
Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPEVR+VTWNNDELSTDALPVHGFEHYKAKDYSLAHAPF+GSSYAGGQWAAGDEP
Sbjct: 258 QGNAQRPEVRVVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEP 317

Query: 210 LYYIVSPKDVVIAKP 225
           LYYIVSPKDVVIAKP
Sbjct: 318 LYYIVSPKDVVIAKP 332

[Close]
BLAST of Spg029665.1 vs. TAIR 10
Match: AT1G08190.1 (vacuolar protein sorting 41 )

HSP 1 Score: 152.5 bits (384), Expect = 5.5e-37
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 150 KGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFAGSSYAGGQWAAGDEP 209
           +GNAQRPE+RIV+WNNDEL+ DALPVHGFEHYKAKDYSLAHAPF GSSYAGGQWAAGDEP
Sbjct: 327 QGNAQRPEIRIVSWNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEP 386

Query: 210 LYYIVSPKDVVIAKP 225
           LYYIVSPKDVVIAKP
Sbjct: 387 LYYIVSPKDVVIAKP 401

The following BLAST results are available for this feature:
BLAST of Spg029665.1 vs. NCBI nr
Match NameE-valueIdentityDescription
THG23021.13.7e-3582.61hypothetical protein TEA_004890 [Camellia sinensis var. sinensis][more]
KAG7029825.14.8e-3597.33Vacuolar protein sorting-associated protein 41-like protein [Cucurbita argyrospe... [more]
KAG6586007.14.8e-3597.33Vacuolar protein sorting-associated protein 41-like protein, partial [Cucurbita ... [more]
KAG5577896.14.8e-3591.03hypothetical protein H5410_058030 [Solanum commersonii][more]
XP_022938247.14.8e-3597.33vacuolar protein sorting-associated protein 41 homolog [Cucurbita moschata] >XP_... [more]
BLAST of Spg029665.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P932313.1e-3794.67Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum O... [more]
P930437.7e-3692.00Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana O... [more]
BLAST of Spg029665.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4S4F0T01.8e-3582.61Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0048... [more]
A0A6J1I1J72.3e-3597.33Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita maxima OX=36... [more]
A0A6J1FDJ32.3e-3597.33Vacuolar protein sorting-associated protein 41 homolog OS=Cucurbita moschata OX=... [more]
A0A2N9IW623.0e-3597.33Vacuolar protein sorting-associated protein 41 homolog OS=Fagus sylvatica OX=289... [more]
A0A1S2YKR75.2e-3596.00Vacuolar protein sorting-associated protein 41 homolog OS=Cicer arietinum OX=382... [more]
BLAST of Spg029665.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08190.15.5e-3792.00vacuolar protein sorting 41 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 3..64
e-value: 1.4E-7
score: 31.1
NoneNo IPR availablePANTHERPTHR12616:SF11VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 150..225
IPR045111Vacuolar protein sorting-associated protein Vps41/Vps8PANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 150..225

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spg029665Spg029665gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23447147..23447304CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23447545..23447645CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23448386..23448476CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23448562..23448694CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23448757..23448782CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23451321..23451453CDS
Spg029665.1-cdsSpg029665.1-cds-scaffold2:23451763..23452053CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spg029665.1Spg029665.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0034058 endosomal vesicle fusion
cellular_component GO:0030897 HOPS complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005770 late endosome