Spg016207 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAACACTTTTTTGGGTCAAAAGAAACCCAATTCCCCGAACTCCGGGCCCGCCGGGAACCTTAACCGTGGCATCGGTGATTTGATTGGCGAGACGAAGGAGAAAGAATCAGCCACCTCCATCTGTCTGCAACAGAATAAAACAACAATCTCAAATCAACAATCTTCAACCACAATCCAATTCAATTACAATTAGTCTTTGTAAATAACCCTTTTGTCTCTTTCGATTCTGAGTCCCCTGTTCGTCTGTTGTTCGGATTACGAATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTATGTTCTTCTTTCTCTTTCTTTATTTGTCTTTATTGATGGGGTGTGTGCTGGAGATTCTGTTCTTCAAGGAATTGGGTTCTGTTCGGTTTTTCATGAAGGGATAGAGAAGAGTAGAAGCTATGGAAATTCGATTTGTTAAATGCATTTGCAAATACGATGACGGGTTTAGTGGTTTGATTGGATTTTTGAAGCTCATGGGGTCAAAAGCTTTTGGAGCCCACTCGAATGCTAATTCTAGTGTCTAACATACAGAAAGAATTACGAGCATGCCTTTTAAATTCTGTGCAACAGAAATTGTGACTTGCCTTTGAACTATTCGAAACGGTTGGATTAAATGAAACTATCAGGCTGTTGCATTTTTCTTCTCATGTATTCCTTTTGTTGATTCAAGTGGTTTAACCGAACAGAGAGCCACTGTTGCCTTTGTCGGTCATTTAACTGGAACACTATTACTGGGTTATGATATTCTTTTCATTCTCTCTTATTTGGGACGAATGAGCGTTTGCATGGAATGAAAATAAAAACTAAGTTGGTTAGAGATTTATGGAAAATTTACGACCTCTATTTTATCAATTCCTTGTCTCTTAAGTTTAAATTCTCTTGTGAATGATTTCAGGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGGTAAATTATTAACGTTTTAAGTGAGAGCATGTTCATTTACACATCTGAGAAGTTCCTCCCAAGTATTCTCTTTAAACATGTATTAATTCACTGGTAAAATTTTTCCTTGTCGCATTCTTCAATATGATAATATGATATACATCTAGTGTTAGACCTCAATTTTTCTTGAGTGTTATCGCATAGATCACTAGGGTGGATGTGGTCTGGATATCAGATTCTCCGATTAAACGCATGAATTGGATTTCTCATTTTTTGACTGAGCATACTATGTTAGGGAATAACGGATACCCACATATGTCCATAATGGTATGATATTGTCCACTTTGAGCAAGAGCTCTCATGGGTTTGCTTGTGGTTCTTCCCAAAGGCGTCATTCTAATGGAGATACTTATCCTCCCTTATATATTCATGATTTTTCCCTTATCTAGTCGATGTAGGACTTTGGTCGCACTTCCAACAATCCTACTCTCAAACAAAGTACCATTGAGCCTCCCCTCAAAGAGTCATTTATCTGTCAAACTCTCTAGGCTTTACCGCTTTACCGAGGCTTTGCTCTTATCTAGAACAACTCTTCTCCGGAGTATAATGCTTGCCCAGAGCCCAACCACGGACCTCCATCATGACTATTAAGGCTCACAACTTCTTTGTTTGGCATCGAGGATTCTACCCAACATGGCTACGTCAGGGGCATGGCTCTAATACCACTTGTTAGACCAAAAGTGGAGAGAACAAATATAATAGAGGAATAAAGTGAAGAATGAAGTGGTGTTAAATTCCATTAAGAGTAGGGTCTTGTATAGGCTCCAAAAAACATTAAATTCAGTACAAGTCTTCGTTCAACCCAAAGAATAGGAACAACTCATAAGAATAGCTATTGACTTTGAAAACAAAATCATTCAACTAAACTAAACCTATTCAACTTTTAACACCCTCCCTTAAAGTAAAACGATGCAATTAGTATTTAATTTAAAGTAGAGGAGGAAACCACCCCAAACAAATTTCGAAGCTTCACAAATGTTGCTAATTTGAGAGGCTTGGTTAAAATATCTGCAACCTGATCTTCACTCTTAGTCTCTTACAATAGCTCAGTTTGATAATTTCATCATTTGTAAGATCTCTTAAGTAATGTTATCTTACATCGATGTGTTTACTTCGTTCTAGTTGCAAGACACGATATCATTTGAATGGTGCTAGCATTGGCAACAAATAATTGGAAAATTCTTCGAATGGATGTGAAATTAGCCTTTCTGCATGGAAACTTGAATGAAGAAGTTTTCATAGATCAACCCCCTGGCTATGCCCAATAGAGCAATGTAGGAAAGGTATATTGATTAAAGAAAGCTTTATATGGGTTGAGGGCTCGGTATAGTCGAATTGAGGCCTACTTTATTAAAGTGGGATTTGAAAAATATCCATATGAACCTACTTTATTAAAGTAGGCCTATACCAAGCCCTATGAGTTTGCTTCAACCCATATAAAGCTTTCTTCAATCGATATACCATTTTTTCATGGCTCTGTTAAACATAGTCAGAGGGTTGATCTATGAAAACTTCTTCATTCAAATTTCCATGCAGAAAGGCTAATTTCACATCCATTTGAAGAATTTTCCAATTTTTTTGTGCTGCCAATGCTACCACCATTCAAATGGTATCGTGTCTTGCAACTAAAGCGAAGTAAACACATCGATGTAAGATATCATTACTTAAGGGATCTTACAAATAATGAAAGTATCAAACTGAGCTATTGTAGGAGTGAAGATTAGGTTGTAGATATTTTAACCAAGCTTCTCAAAGTAGCAACATTTGTGAAGCTTTGAAATTTGCTTGGGGTGGTTGCCTCTTTTACTTTAAACTAAATACTAATTGCATCCTTTTAGTTTAAGGAAGTGTGTTAAAAGTTGAATATAAGTTTAGTTTACTTGAATGAGTTTGTTTTCAAAGTAAAAATAGCTATTCTTATGGGGTTTTCCTATTCTTTGGATGGCATGAAGACTTGTACTAAATTTAGTGTATTTTGGTACCTATATAAGGTCTTACTCTTAATGGAATTTAACACCATTTCATTCTTCACTTTCTTCCTCTATTACATTTGTTCTCTCCACTTTTGGTCTGACAAGTGGTGTCGAACAAAGAAGTTGTGAGCTATAGTCATAGTAGAGGTCTATGGTTGAGCTCTTTGCAGGCGGTATACTCCGAAGAAGAGGAGTTTTCCTAGATAAGAGCAGCCTAGAGAGTTAAACGGATAAATGACTATTTGAGGGAAAGCTCGGTGGTACTTTATTCAAGAGGAGAATTGTTGGAAGTGCGACCAAAATCTCACATTAGCTAGATAAGGGGAAGATCATGGGTATATAAAGGAGGACAGGTATCTCCATTGGAATAAGGCCTTTTGGAAAAACCAAAAGCAGAGCCATGAGGGTATGCCCAAAGTGGACAATATCATACATATGTAGATATGTGGGTGTCTATTGTTCCCTAACAGCATATACATATAGTAGTCGTTGAATGGTTATTGTTGCCAGTTCCCTTCGGTGAAATTAATCAATTCCTATGGCTTTCATTTTCTCAATTTAAGATGCCTGAGAACTTAAGCTCAGTTGTCCTGAGTTCTGAGAAATCGAGCCAATGTGTTGGCTAAGTGGGTAGGACAAGCATAATGCACGATTGATCTTGTAAAAGTTTTTTACGTACTACTTCAAATTGCTATGCGGAACCTTTGAGATTTGTTTCGAAACTTAGCTTGTTTTTGAGAAAGCTTTTGGGAATTCTTGGACGTAAAATTCTTTCTGCTTGACCTTACTTGCGTGCATATATCAATCAATTCTATGTAAATTACCATGCATGAGCTCACAATTGTTTGAGCTGCTACTGTGAGTTAATTACATCAGTAATCTTAATTAATCCATCTTTTCTTCCAAATACTTAGCAAGTGCAACGTTTTGCAGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGTGACTCCAAAACTTTTCTATGATGTTATAGAGCTCATCTTGATCAGTTGTTCTTATTATTTGAAGTTTTGGCAGGCATGATTCTGCATGCTGCATTTCGGAAGCTGACTCTCGCTAAGCCCCCATCTACAGGAAGTCGAAAATAGCCAGCTACAGACAATGATATTTTTACTCTTGTATGTGAGTTATGTTTGAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA ATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA ATGAGTTTCTCATCCAATCCACTCTCCCTCAGCGTCCCTGACGGTGCCTTCGATTCATGGCTTCGCGATTCCGGCTACCTTGAAATTCTCGATCAGCGCACCTCCGACCTCCACCGCCATTCCTCCTCCGCCGCCGCTGCCGCTGCTCCCACCACACCCACCTCCGCCCCCACCGCCCCTTTAGCCACCGGTTTCTTTATCTCCCTCTTCTCTCGTATCGGGACCCTTCTTTCTATTTTTACTCTTAACCCCTTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGGCCGACCCCCTCCTGGACCTCTGGGTTTGTTGGGTTTTTTGAGTCGTACTCGTTTCCTTCTTCGCCGGCTCAAGCTCGTCTGAGAGTCCACGAGAATGCTAAACGCTATGCTCGCAATTACGCATCCCTGTTTGTTCTCTTCTTTGTCTGTACGCTGTACCAGATGCCTCTTGCCCTCCTTGGATTGGTATCATGTTTAGCACTTTGGGACCTTGTTAAGTTTTGCGGTGATAGGTGGGGATTAGACAAATATCCAGTTGTTTGGCAGTGTCTGGTTCGCATTGCTCAATGTGTGACTGTTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCACTTGGCATTGGATATACAGGCTTTGAGCAAGTTTACTGCAAGGTACCGACATCTGATTCTGTGATAAGACGAAAAGTGCTGGTAATTCTGAATGCTATACCTCCGCATTCTGCTTGCTTGAAAGCATGGCTCATGTCCTGCATGGGACACCGTACCTTTGCTAGAAAATTCACATTATGGCATGGGGTTCTCTGA MSFSSNPLSLSVPDGAFDSWLRDSGYLEILDQRTSDLHRHSSSAAAAAAPTTPTSAPTAPLATGFFISLFSRIGTLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDLVKFCGDRWGLDKYPVVWQCLVRIAQCVTVIILLFSNFQMAIFCALGIGYTGFEQVYCKVPTSDSVIRRKVLVILNAIPPHSACLKAWLMSCMGHRTFARKFTLWHGVL Homology
BLAST of Spg016207 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402.1 bits (1032), Expect = 3.8e-108 Identity = 203/217 (93.55%), Postives = 208/217 (95.85%), Query Frame = 0
BLAST of Spg016207 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida]) HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107 Identity = 203/217 (93.55%), Postives = 208/217 (95.85%), Query Frame = 0
BLAST of Spg016207 vs. NCBI nr
Match: XP_022935725.1 (PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935727.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935728.1 PRA1 family protein H-like [Cucurbita moschata]) HSP 1 Score: 399.1 bits (1024), Expect = 3.2e-107 Identity = 201/217 (92.63%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Spg016207 vs. NCBI nr
Match: XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 398.7 bits (1023), Expect = 4.2e-107 Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of Spg016207 vs. NCBI nr
Match: XP_022976569.1 (PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976572.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976573.1 PRA1 family protein H-like [Cucurbita maxima]) HSP 1 Score: 398.7 bits (1023), Expect = 4.2e-107 Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 4.5e-64 Identity = 126/220 (57.27%), Postives = 163/220 (74.09%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.5e-107 Identity = 201/217 (92.63%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 2.0e-107 Identity = 201/217 (92.63%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1FMA4 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111446689 PE=3 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 3.4e-107 Identity = 198/217 (91.24%), Postives = 209/217 (96.31%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 3.2e-105 Identity = 198/217 (91.24%), Postives = 202/217 (93.09%), Query Frame = 0
BLAST of Spg016207 vs. ExPASy TrEMBL
Match: A0A6J1J379 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111480937 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 5.5e-105 Identity = 194/217 (89.40%), Postives = 206/217 (94.93%), Query Frame = 0
BLAST of Spg016207 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H ) HSP 1 Score: 246.1 bits (627), Expect = 3.2e-65 Identity = 126/220 (57.27%), Postives = 163/220 (74.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|