Spg010968 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTGTCCGTTGAAGTATTCAGAGTCGTTAACGGAGGTATGTTTTTCACCGCTTAACCTTTTGCCAATGTATTGGTATTTTGTAGAACAAAATTAATTTACGAACGGTCCAATTGCTTCCGCTGTAACGGAATTGGGAATTCCAATCCTTCACAAGTAACAACCTAAAAGGTCTATAGTACAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGTGATGCGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTGTAATAAGACCGGAGCACGAAATAGTAAACCACTAGATGTAACACCGTTAACTAGTTAGGTTACTGTTTCAATAGGATGACCTAGGTAACTCAATCTTAATCCTGAGTGTGTCATGAACTCCTTCTCACGAGGGATTGTCCTTTGATTAGTACGGGTGAGAGTGGCCTGCACGCCGACTCAATAAGCCTACCTTCTTGGGGACAAGACCGAGTGGGGGGCTGGGGACATGACAATACAAGATGGAATTCACTCCTTTCCCTATTGGGGCAAGTAGATGTGTGTTACCTTAAGGGCTGATTCCGGGTCTTGAACAAGGGCGCCCATCCTCTCCTGGCCCGAGAGGAACTGCTGTTTATTGATTGGATCATAAACAGATTGTTCATTAGAGGAATCAGTGGTACTTAAGGATCCAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGCGTTACGAACACTCGTGAAGGATTGACTTACTGTTATTGGTCAATATCCGTGGACACAGAAATATTCTACAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCTGTTAACGAATGTTGACTAATTTGGTTAATGAGTTTAGCCAATTAGTCTCGTATCGTTGAAGCTTCTGATCTGTAGGTCCATTATGTCCACCTGCTAGCTCGTAAAGGGTTCTGAGGTTAAATAGTCTTGAATAGAATTTGAAGTATGTTCAAATTCGTTAAGGGAATTTTATTGTATTTGATAAAATTAAAATAATGTATAAAGATACATTATAATATAAGTTTAATTGATGAATTAAACTTTATATTATAAAATTAATTTTGGATGTGATTCAAAATTAATTAATGAGAGAATTAAATATTTGAAAGAGTTCAAATATTAAATATGAATTAGATTCATATTGAAACTATAGGTTAAATTTAATGTGATTGAGATTCATATTAACACTATAGTATATGAGAGAATTATTTGAATAATGATTCAAATAGTAAATTAATTAAATATATGATATTTAATTAATGAATTAATTAATTGGAGAATTAATTAATTTGATTTAATTAAATGTGATTTAATTAAAATTAATTCTATAGTCAATATTAATGTACATTATGATGCACATTAAAACTATAGGTTAAATGAGAGAGATTAAAATTGAATATGATTTAATTGTAATATTAATTAAATATTGGATATTTAATTAACGTGGATTCAATTAATGAGATTAATTGAATGGCCAATTTAATTCAATTTAATATGATTCAAGTTGAATTAAAATATCTTATGTTATAATTGATTTAATTAATATTGTTTTAATTAAATTAATTATAATTAATTAATTAATTAAATGATTATTATTATTTAATTAATTGACGGCCAAGATCGTTTGGATTAGATCCAACGATCGAGATTAAGTAGGGTAATACTTCTCTCCCCACTTATCGTAAAGTGGAGAGGGGTTACCAATACGCTACTTATTTTTCTCATTTTTTTCAGAGAAAAAAAAAATTCTCTCTCACCTCCCCCTCTCTGAGATTCTCTAAAAATTTTTTTTTCAGCAACATTCTGCTGGAAAATCATTCCCAACTCAAGATTGGATCCCACAATCCAAGCCTCATGAATTCAGAGGATAGCGGGTGCTCTTTGATGGTTGTGTTCAAGAGATCGTGACGAAGGGTTCGTTGAGGAGCATAGTGCTGTGAAGAACAGTCTTCAACAAGTAAGTTCCTAAAATTCTAAATCGTTTAGAATTAGTAATTGCATGCTTAATCTAGTTTAGAAAATAATTTTCTATTTTGCCTAACGTACCGGTATTCGAAATAATTGAAATTAAATCACGCACGATTCAATTCGCTTCCGCTTTAAGGATTTAATTCCTTCACATTGAAGGGGAATTCTATCGACTGGTATACCGACCTTGAGCCTGAGACTATCGATAGTTGGGAACAACTTGAGAAGGAGTTCCTCAACCGCTTCTACAGCACAAGACGAACCGACAGTATGACGGAGCTCACCAGCGCTAAACAACGGAAAGGCGAACCGGTTGTTGACTACATCAATCATTGGAGAGCTTTAAACTTAGATTGCAAGGACCGACTCACCGAATTGTCTGCTGTTGAAATGTGCATCCAAGGCATGCATTGGGGACTCCTCTATATCCTACAAGGAATAAAGCCCCGCACTTTCGATGAGTTGGCAACCCAGGCTCATGACATGGAATTGAGCATTGCTACTAGAGGGAACAAAGATCCTTTTGTCCCCGATGACAGGAAAGAAAAGAAAGAAGTTAAGAATACTGAGAAAACTACCAAAAGCACTACCAAAGAGTCAATGGTAGTCAATGCAGCTCCTTTCAAGTTTTCTTCGAAAGGAAAAGAATGTAAGCGACCAGAAGAGATGGGGAGAGTTAATGATCCCAACTACTGCAAATATCACCGAGTCATCAGCCACCCGGTGGAAAAGTGCTTTGTTCTGAAGGAGCTAATTTTGAAGTTAGCTAAAGAAAAGAAAATTGAGTTAGATCTTGATGAGGTAGCTCAATCAAATCATGCGATAATAGCAACAAACCTCAACAACCGAGTAGCTCCAAGCCCGATTCATAATTCAGTAGTAAGTCGGATCCAGTTCGGGACATTAGAGCCGATTGTTATTTGGCTTCAGCAAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAGAGAGCCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAATGTTTAAGAAAACCTAAACTAGTTGTTGAAGAGAATCAAAATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGGTGATGACGAGGCCAGAAGATTCACCTTCATTCACAATAGATGATTTGGTGTCACTCCCTCAAGCAACCAAAGATGCTATTGTTGAAACATTGAAAAGTTCTAACGTTGCAGACATTCCAGACTTGCAAGGACATAGATGTGCCTCATGTTGTATGTCAATTAGCTTCACAGATGAAGACTTGATGTTGGGATCGAAGCCTCATAATAGGCCTTTATTCGTCTCAGGATATATTCGAGAGCAAAAAGTTGGCCGAATTCTTATCGGCAATAGATCTGCGGTGAATATAATGCCTGAGTCAACCATGACACACAGATAGGAATTTCAATGGATGAACTATCAAACAGTAGGTTGGTTATTCAAGGCTTCAACCAAGGCGGCCAACGAGCAATCGGCATGATCCGTTTGGAGCTTGTTATTAGAGATTTGAAGGCTAACACTTTATTCCATATCATAGATTCCAAGACCACTTACAAGTTGTTGTTAGGTCGTCCTTGGATTCACGGAAATGGATTAATATCTTCTACACTTCATCAGTGTTTCAAGTTCTATCAAGACGGCGTAAAGAAAGTTGAAGCTGATACTAATCCCTTCTCAGAGGCAGAATCCCACTTTGCAGATGCAAAGTTTTATATGCAGAATGATAAAATAGGGGAGATCATACCAACTGAGATTCCTCTGATTGAAAGTCACAAAGAAGAGCATCCAAAGAATGCGAAGAAGGAGTCAATTGAAGAGGTAGATGCTTGTGAAGTTCAGACAAAGGAAGCACCTACCCATCCTGCGAAATCAAAGGCTCCAAAGGAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGGCGCAAGAAAGTGGAGTCACCATTCACAGAATGTTCAGGGATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTTATCACACCTCTGACAACAATTACTAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTTCCGGAAAGACAAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAATCTTCGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCAACCATCCTCGAGAGTCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTTTGTCTTTGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAGTATTCATCTTCAGAAAAGGAAGGTCAGAGAAAAACTTCTGCTCCTACTCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTCGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGCCTCGAAACAGAAGAATCCGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCAGATGAAGAGAAAACCTTTC ATGGTGGTGTCCGTTGAAGTATTCAGAGTCGTTAACGGAGGTCCATTATGTCCACCTGCTAGCTCAGATCGTGACGAAGGGTTCGTTGAGGAGCATAGTGCTGTGAAGAACAGTCTTCAACAACAAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAGAGAGCCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAATGTTTAAGAAAACCTAAACTAGTTGTTGAAGAGAATCAAAATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGCATCCAAAGAATGCGAAGAAGGAGTCAATTGAAGAGGTAGATGCTTGTGAAGTTCAGACAAAGGAAGCACCTACCCATCCTGCGAAATCAAAGGCTCCAAAGGAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGGCGCAAGAAAGTGGAGTCACCATTCACAGAATGTTCAGGGATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTTATCACACCTCTGACAACAATTACTAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTTCCGGAAAGACAAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAATCTTCGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTTTGTCTTTGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAGTATTCATCTTCAGAAAAGGAAGGTCAGAGAAAAACTTCTGCTCCTACTCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTCGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGCCTCGAAACAGAAGAATCCGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCAGATGAAGAGAAAACCTTTC ATGGTGGTGTCCGTTGAAGTATTCAGAGTCGTTAACGGAGGTCCATTATGTCCACCTGCTAGCTCAGATCGTGACGAAGGGTTCGTTGAGGAGCATAGTGCTGTGAAGAACAGTCTTCAACAACAAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAAAGAGAGCCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAAAAGAGAAAGACAAAATGTTTAAGAAAACCTAAACTAGTTGTTGAAGAGAATCAAAATTTTGTTCTATCTCGACATCCAGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTATTAATGACGATCATGAGGATATCCCTAAGATAGTCGCATGTCATGCTGTCAATGCATTCGAAGAAGGCGATTCTTCTTCAAGTCCATCTCAGCATCCAAAGAATGCGAAGAAGGAGTCAATTGAAGAGGTAGATGCTTGTGAAGTTCAGACAAAGGAAGCACCTACCCATCCTGCGAAATCAAAGGCTCCAAAGGAAGAGGCGTCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGGCGCAAGAAAGTGGAGTCACCATTCACAGAATGTTCAGGGATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTTATCACACCTCTGACAACAATTACTAAGCAAGAGATTCAGGAATCAAAGACTGATCGTACCAAAGTGACTTTTCCGGAAAGACAAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAAAGTCTAATCTTCGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTTTGTCTTTGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAGTATTCATCTTCAGAAAAGGAAGGTCAGAGAAAAACTTCTGCTCCTACTCGACGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTCGACCGCCTTCAAGCAACAAATGGCCAATGCAAGGGAAAGTTGAAAAGCCTCGAAACAGAAGAATCCGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCAGATGAAGAGAAAACCTTTC MVVSVEVFRVVNGGPLCPPASSDRDEGFVEEHSAVKNSLQQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKTKCLRKPKLVVEENQNFVLSRHPVTLKDFFPKNFINDDHEDIPKIVACHAVNAFEEGDSSSSPSQHPKNAKKESIEEVDACEVQTKEAPTHPAKSKAPKEEASSNVPILRYVPLSRRKKVESPFTECSGILKVGDVEILKENFITPLTTITKQEIQESKTDRTKVTFPERQTKAGFDPNAYKLLEKAGYDFTTHTEFKSLIFDGRSELSPTQKKLQKEDAHHITIEEMSDPEDKKNDDSQKIFVFDRIKAPTTRLSVHQRLKYSSSEKEGQRKTSAPTRRSVFHRLSVSTSKKVDEPLRSVFDRLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSQMKRKPF Homology
BLAST of Spg010968 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 208.8 bits (530), Expect = 9.9e-50 Identity = 168/492 (34.15%), Postives = 236/492 (47.97%), Query Frame = 0
BLAST of Spg010968 vs. NCBI nr
Match: TYK05005.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 200.3 bits (508), Expect = 3.5e-47 Identity = 189/640 (29.53%), Postives = 258/640 (40.31%), Query Frame = 0
BLAST of Spg010968 vs. NCBI nr
Match: KAA0062018.1 (uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]) HSP 1 Score: 181.4 bits (459), Expect = 1.7e-41 Identity = 129/333 (38.74%), Postives = 171/333 (51.35%), Query Frame = 0
BLAST of Spg010968 vs. NCBI nr
Match: KAA0062018.1 (uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]) HSP 1 Score: 46.2 bits (108), Expect = 8.5e-01 Identity = 28/98 (28.57%), Postives = 53/98 (54.08%), Query Frame = 0
HSP 2 Score: 179.5 bits (454), Expect = 6.4e-41 Identity = 133/341 (39.00%), Postives = 167/341 (48.97%), Query Frame = 0
BLAST of Spg010968 vs. NCBI nr
Match: XP_031737372.1 (uncharacterized protein LOC116402244 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 6.4e-41 Identity = 133/341 (39.00%), Postives = 167/341 (48.97%), Query Frame = 0
BLAST of Spg010968 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 4.8e-50 Identity = 168/492 (34.15%), Postives = 236/492 (47.97%), Query Frame = 0
BLAST of Spg010968 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 1.7e-47 Identity = 189/640 (29.53%), Postives = 258/640 (40.31%), Query Frame = 0
BLAST of Spg010968 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 6.9e-41 Identity = 113/250 (45.20%), Postives = 148/250 (59.20%), Query Frame = 0
BLAST of Spg010968 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.7e-02 Identity = 21/45 (46.67%), Postives = 31/45 (68.89%), Query Frame = 0
HSP 2 Score: 177.2 bits (448), Expect = 1.5e-40 Identity = 129/313 (41.21%), Postives = 161/313 (51.44%), Query Frame = 0
BLAST of Spg010968 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-10 Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 0
HSP 2 Score: 176.0 bits (445), Expect = 3.4e-40 Identity = 127/316 (40.19%), Postives = 165/316 (52.22%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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