Spg008493 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCTGGGCATGGAGTATGTGAATCGTCAGGGATGACTTCAAGAACACAGCCATTGGAATTAACCAATGGCTAACTATATTATAGATCCTTCATTCCCTCCCTATATTATAGAAGGCGGCCAGCTTACTTTTGTAAACCTAACTTTTTCTGCAGAAATTTACAATTTCCCGAGTCACAGTGTGGCCATGGATTATGTCAGTGATGACTTCAAGAACACACCCACTGGGAGTAGCCATCTTTCATTGGTCTCCTATATTACACAAGAGGCCAATGCCCTCTTTCCCACAATTCAAATCCTTTCCCAAAACCTTCATTTCTTCGATTTCAACAAAACCAATGGCCTCTGAGGATGACAAGTATCGCTCGCTCTTGTGTGGAGATGAAGAGAAAAACACCAAATGGAGATATGGTGTTCCTCCTAACTATGATCTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTCAAGTAATCTCTCTCTCTCTGTACTAAATCCTCTGTTTTTTGGATGGGACTGTTTTGTTTTGTTTGTTTTGGGTTGTAATTGCAAAAGGGTTTCATCCCTTTTCAGCTTTTAACTTGAAAATTTTCACTGTGGAATGGAAGGTATGGCCTGTTGGGTCACTTGAACAGAAGGTGCAAAGCTTAGTGAAGAATTTCGAGATGGAAATGTTCCATAAGATATGGAGAAGCGACTTCAAAACAATAGATGTAAACAAGTATACTTTCTGTCTCAATGGTATGAACAACATTGATGAAATTGCATTCCTAATGTTTGAATGGTTATTGTTGATATGTCTTGAATCTGATATGAAGCGCTCCAAATGACTAAGTACGGGGGTCTCCTATTTTGGGTCTATTATGTTAGGGTTAAGAGTGGTGCCGTATATAAACCCTCTTAACCTATTTTACACTAATCTCTATAATCTGAATACTCCTCGTAATAAGATTGTTCTCTCCCTCTACCCGTGGACGTAGCTAACACACCGTTACTGAATCACGTAAATCTGTGTGTTGTTTTCTTCACCCTTTCATTCTTGATTTACGATTTCTGTCATAACAGTTATGATAATATACCATGTTGTTTCATCTCAAATTGACGATGAACAAAACAAACATTTTCTCAGGAAGAAAGCGTTTAACCACTGAAGAAGTAGGAAAACTTGGAGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAGTACAGGTACTACAATGCTGCAAAGGAGACCGCGGAATCGTCTCACCGAGCTTTCACCGCGACGTTCCTTCGAGGTTTTGCTCTTGAGATTATCCAAGTTTATTCAGGGCCTCCGGACATTGTGTTCAAGTTCAGGCATTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGTGTTGCCATTTTTAAGGTGGGATCCAATTCCAATTCTTGCTTGGGTGTTACTCTTTTTTGGCTTGTTCTTATTGATCTTTCTGATGAAGCAGGTGGATGAGGAAGATAAAATTGTGGGGGTGGAGTTCTTTTTTGATCCAGCTGAATTGCTTGGAAAACTCTTGAAAGGTCCTGGCTTGGATGGCTCTGGCTCAGCTGAAAAAGCAGTTTCGAGCTGTCCTGTCTTGAGAAACACAGGGTAGAATTTTAAGTTATGATTCAATGTTTCATTCTTGTTTGTGTGGGATTACAAGTATATCATTAAGTAGTGAAGCAAATGGATGTAACAATTATCTATATATACTAGTTGGAATAAAGCACGATCTCTT ATGTCAGTGATGACTTCAAGAACACACCCACTGGGAGTAGCCATCTTTCATTGGTCTCCTATATTACACAAGAGGCCAATGCCCTCTTTCCCACAATTCAAATCCTTTCCCAAAACCTTCATTTCTTCGATTTCAACAAAACCAATGGCCTCTGAGGATGACAAGTATCGCTCGCTCTTGTGTGGAGATGAAGAGAAAAACACCAAATGGAGATATGGTGTTCCTCCTAACTATGATCTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTCAAGTATGGCCTGTTGGGTCACTTGAACAGAAGGTGCAAAGCTTAGTGAAGAATTTCGAGATGGAAATGTTCCATAAGATATGGAGAAGCGACTTCAAAACAATAGATGTAAACAAGTATACTTTCTGTCTCAATGGAAGAAAGCGTTTAACCACTGAAGAAGTAGGAAAACTTGGAGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAGTACAGGTACTACAATGCTGCAAAGGAGACCGCGGAATCGTCTCACCGAGCTTTCACCGCGACGTTCCTTCGAGGTTTTGCTCTTGAGATTATCCAAGTTTATTCAGGGCCTCCGGACATTGTGTTCAAGTTCAGGCATTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGTGTTGCCATTTTTAAGGTGGATGAGGAAGATAAAATTGTGGGGGTGGAGTTCTTTTTTGATCCAGCTGAATTGCTTGGAAAACTCTTGAAAGGTCCTGGCTTGGATGGCTCTGGCTCAGCTGAAAAAGCAGTTTCGAGCTGTCCTGTCTTGAGAAACACAGGGTAG ATGTCAGTGATGACTTCAAGAACACACCCACTGGGAGTAGCCATCTTTCATTGGTCTCCTATATTACACAAGAGGCCAATGCCCTCTTTCCCACAATTCAAATCCTTTCCCAAAACCTTCATTTCTTCGATTTCAACAAAACCAATGGCCTCTGAGGATGACAAGTATCGCTCGCTCTTGTGTGGAGATGAAGAGAAAAACACCAAATGGAGATATGGTGTTCCTCCTAACTATGATCTTGTCAACAAGCTCTTTGAAGAAGAGAGGACTCAAGTATGGCCTGTTGGGTCACTTGAACAGAAGGTGCAAAGCTTAGTGAAGAATTTCGAGATGGAAATGTTCCATAAGATATGGAGAAGCGACTTCAAAACAATAGATGTAAACAAGTATACTTTCTGTCTCAATGGAAGAAAGCGTTTAACCACTGAAGAAGTAGGAAAACTTGGAGGTTACAATCCCTTCCTTCAGACCTCCCTCCCTGAGGAGTACAGGTACTACAATGCTGCAAAGGAGACCGCGGAATCGTCTCACCGAGCTTTCACCGCGACGTTCCTTCGAGGTTTTGCTCTTGAGATTATCCAAGTTTATTCAGGGCCTCCGGACATTGTGTTCAAGTTCAGGCATTGGGGCTACATGGAGGGGCCTTTCAAAGGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGTGTTGCCATTTTTAAGGTGGATGAGGAAGATAAAATTGTGGGGGTGGAGTTCTTTTTTGATCCAGCTGAATTGCTTGGAAAACTCTTGAAAGGTCCTGGCTTGGATGGCTCTGGCTCAGCTGAAAAAGCAGTTTCGAGCTGTCCTGTCTTGAGAAACACAGGGTAG MSVMTSRTHPLGVAIFHWSPILHKRPMPSFPQFKSFPKTFISSISTKPMASEDDKYRSLLCGDEEKNTKWRYGVPPNYDLVNKLFEEERTQVWPVGSLEQKVQSLVKNFEMEMFHKIWRSDFKTIDVNKYTFCLNGRKRLTTEEVGKLGGYNPFLQTSLPEEYRYYNAAKETAESSHRAFTATFLRGFALEIIQVYSGPPDIVFKFRHWGYMEGPFKGHAPTGERIEFYGVAIFKVDEEDKIVGVEFFFDPAELLGKLLKGPGLDGSGSAEKAVSSCPVLRNTG Homology
BLAST of Spg008493 vs. NCBI nr
Match: XP_016899458.1 (PREDICTED: pathogen-related protein-like isoform X2 [Cucumis melo] >KAA0058902.1 pathogen-related protein-like isoform X2 [Cucumis melo var. makuwa] >TYK23722.1 pathogen-related protein-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 429.5 bits (1103), Expect = 2.3e-116 Identity = 206/236 (87.29%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of Spg008493 vs. NCBI nr
Match: XP_038885265.1 (pathogen-related protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 425.2 bits (1092), Expect = 4.3e-115 Identity = 204/236 (86.44%), Postives = 219/236 (92.80%), Query Frame = 0
BLAST of Spg008493 vs. NCBI nr
Match: XP_031743307.1 (pathogen-related protein isoform X1 [Cucumis sativus] >XP_031743308.1 pathogen-related protein isoform X1 [Cucumis sativus] >XP_031743309.1 pathogen-related protein isoform X1 [Cucumis sativus] >XP_031743310.1 pathogen-related protein isoform X1 [Cucumis sativus] >XP_031743311.1 pathogen-related protein isoform X1 [Cucumis sativus] >XP_031743312.1 pathogen-related protein isoform X1 [Cucumis sativus]) HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114 Identity = 205/236 (86.86%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of Spg008493 vs. NCBI nr
Match: KAG6578912.1 (hypothetical protein SDJN03_23360, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016433.1 hypothetical protein SDJN02_21542 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114 Identity = 201/236 (85.17%), Postives = 217/236 (91.95%), Query Frame = 0
BLAST of Spg008493 vs. NCBI nr
Match: XP_011657303.2 (pathogen-related protein isoform X2 [Cucumis sativus]) HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114 Identity = 205/236 (86.86%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 260.0 bits (663), Expect = 3.1e-68 Identity = 124/230 (53.91%), Postives = 155/230 (67.39%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy TrEMBL
Match: A0A5D3DJI2 (Pathogen-related protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00350 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116 Identity = 206/236 (87.29%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy TrEMBL
Match: A0A1S4DU25 (pathogen-related protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485647 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116 Identity = 206/236 (87.29%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy TrEMBL
Match: A0A0A0KF98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338110 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 7.9e-115 Identity = 205/236 (86.86%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy TrEMBL
Match: A0A6J1FND6 (pathogen-related protein-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445489 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.3e-113 Identity = 199/236 (84.32%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of Spg008493 vs. ExPASy TrEMBL
Match: A0A6J1FM94 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445489 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.3e-113 Identity = 199/236 (84.32%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of Spg008493 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 249.6 bits (636), Expect = 3.0e-66 Identity = 122/234 (52.14%), Postives = 160/234 (68.38%), Query Frame = 0
BLAST of Spg008493 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 242.7 bits (618), Expect = 3.7e-64 Identity = 121/234 (51.71%), Postives = 158/234 (67.52%), Query Frame = 0
BLAST of Spg008493 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47 Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = 0
BLAST of Spg008493 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47 Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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