Spg006640 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCGGTGTTTACACGATGTGGTACGAATGTTCCAGCCAAGTACACGATTTTAGTGGCACCGTATACCAATCATACGAGAGGTGGGACGTCGCAGAAGTAGCTTATACTGCTTACACCATGGAAGTGGACAGTCATTCCGCTCATCATGGAGACCTTCACCTTCACACTAGCTCTCCTAACCGTGACCTAGATAGGAATGTAGTTAATAGGACTGTTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTGTTTGGTGTAGCTGTCGTCATATTAGGTAGTCTGATGTAGTATGGACATTTATTTTCAGGATTGTCCGTAGAGGCTATCAAATGGATGCCCAAGATAATGAAATTCAAGAATTGATAGCAATTCTTACTGTCATTTGTGCGACGCAGTATCAGTTCATCGCGTCAATTCTTGGGATCTTGCACTCGAGTTATTCCTGGGAATTTCGATCCCCGACTCATGTACGACATCGAATCAGGCAACTAAATTTCTTTCGTCTTATTCACGAGGATGATTTAGCTTGTCGTGAAAATACACACATGGATCGACGAACATTCACGAACCTGTTGGTGCGAGTGTGAACTGAATGGATGGAATGTGAGATAAGATGGATAATAATAAGGAAAAAATATTCAGCCAACACTTAAGTGCAAGTATACACTGTCGCACGTAGTAATAAAAAAAACCTTAGAAGTACTCCCAAGGGTATCGATCCCACGAGGACTAAATTGGAAATTCAGATTTGATGAAGAAACTGCTCAAATGATTGCTTTTGAAAAAGGTAACCAAAGAAAATAAGTTGATTGATTGGGTTTTTTAAAAGATAAATAAAACATGCAAATAACTAATAAAGAATAACAATAAGATAAAACGAGGTATTCAACATGGATTCATCCCTAAAGTAACAACCATACTTATGCAATATCTAACTTAAGAGTATTTAATGCATTGGGTCAGATTTAACTTCCATTTGGCGTTTGTTCCCAAAAACCGTTAGAAGGCTAAGCGAGTACCGTTATGCACATTTCTGTGACTCGACTCCGACATAGATAATTCACGAATGCAACCTATAACCCTATAATCGATATAGGGTGCCTTAGGCAGCTTGCCCTATACCGCCGAACAATCTCTTTCGAGCTTTTTCTCCTATATCACCTTTATGAGAATCGATATCGTTTGTCCCTTTCGATATCAAACTCACATAGCATGCAAAGTCTAAGTGATCAAATTAAACTCAGCAAGATCAGAATGATATTCAATAAAGAATGACATGCATTAAACTCTACTTAAGCAAATAAAACACTTTCAAGTCATTAAACCCTAAGGGAATTCACCACATTGAACCCCTCAACGGGTTTAGCTACTCATGATGGGATAAAATGCAAATGAACACATTTTCATTGAAATAATGATGTAAAGAATACAAAATAATGAAAAGATTCAAGAGTTGGAAATAAAGGAGATAGCTAAATATTATGGGTTTTTTTGTTTACACAATCCTTCTAGAGTTCGCTAAGACACTCCACTCTCTCACTTTTACAAGATGGGAATGGGTGAAACTCTCTACAAACCACAAGGTTTGATGTCTAACTCTCTCTCGGGTTAGAATTTGGTCATCTAAGAAGGACCTCGGGCATCCCTACTCATTGACGTCGAGCCAGGGTTCTGTCACCACCCTTTTCTTCCAAGTGAGTTTTGCTTGGATTTGACTTCGAATCCCGAGCTTATATAGTGTAGAAATTAGTTGAGGAGCTGCGAAATAGGTGCTGGAAGGTTGCCCAGTCAATTTCGGGGTCAAAACAACCGGTTAGGTGCGAAGAAGACTCGTCAACAACGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGTCGCATTTCAAGTTTGCCTTCCCAGAAATGCGGTCGCAATTCTGGGGAATTCCAGCTTCTCCTCTGTTTTTCTGCACAACAGCAAACTAAGTCAAATTTGCTTCAAATCAAGTCTTTTTAAGCATAAATAAGCATAATTCAACAAAAGTGACTCTCAACACCCTAACTTATCAAATTAACATATTTTGAGCTCGAAAATAATAAAATTGACCTAAACACTCAATATTTGACTAAGAAATGAGCTAAATATAAGGGTAAAATAGGTATATTTTTTACCCTTATCACCTGTGTACCCTTCTACGGACCATTGGTAGACTGCAAGCCACTAACTACGTCGATGTGGAGGAGATGGTTGCAATGTTCCTCCACATCGTTGCACGGGACGTTAAGAATCGTGTGATCCGTCGTCAATTCGTGTGTTCGAGAGAGACCGTATCCTGGCACTTCAATGTCGTACTGGATGCGGTACTCCGATTTCACCCAGTCCTATTGAAAGCACCTGAACCAGTTACCAATGCGTGTACGGACGATAGGTGGAAGTGGTTTGAGGTAATTAGATGTTGTTATCTTGTCTTCCACTGGAAGACAACTTAACTTCAGGAAAATACTCAACCACTAAAACTTTATCCCTCGTCTGTTCGCATAACTGCTTAGGTGCTCTTGATGGTACACACATCAAGGTCAACGTCAGTGCGGCAGATCGCCCCAGATACCGAACGAGGAAGGGGGAGATTGCGACTAATGTACTAGCCGTTTGTTCCCAAAATGGCGAGTTCATTTTCGTGTTCCCAGGGTGGGAAGGATCTGCATCGGACTCAAAGGTACTTCGTGATGCAGTCTCACGTCCTTCAGGCCTAAAGGTTCCCAGGGGCTACTACTACCTGTGTGATGCCGGATATCCTAACGCGAATGGATTCCTGGCACCATACCGTAGCACACGATACCACCTAACCGAGTGGCGAGGTGGAAACCCACCCACGACCCCGAAGGAGCTTTTCAACATGAGACATTCATCGGCATGGACTGTCATAGAACGAGCCTTCGGCATGTTGAAGGGTCGATGGGCAATATTGAGGGGCAAATCGTACTACCCTGTTGATGTGCAAGTGAAAACCATCACCGCTTGTTGCTACCTTCATAACCTAATAACATGGGAGATGGGACAGGATCCTTCGATGGAGGCCACTCACACGGGGGAACAAGATTCCAACGGTATGGGAACAGACAACATCACATTCATTGAGTCCACCACTGCATGGAGTTCCTAGAGGGATGAATTGGTGAATCAAATGTTCACTGAATGGAACAACAACTAAGATGTTCGCCTCAACTTCTTTTGTCAATATTTTTTGTAACACGAGGCTGTAGAAAGTCCCACTCTTTTTTGTATATCGAACATGTCTTAAGAACAGTATGATGTAAATAGATCGTAATTGGCATACGTAAACATGTATATTTTGGAATGTAAATGGATTGCATTTTAACTGTTTATTGGCACCTATGTTCATTAAATTTTACTAGTATGGAACTTTGTAAATGTTCTTCCTTCTTTATGTCCTCCAACTCTGGTTCTGATTCTTTGTTAAAGATGCAGATGGTCGCGCCTGCCTCAGCTTCCAAGAAAGAGAAACACGTCTGGACACCAGACGAAGATGCAATGCTAGTGCAGTGCCTAGTTCACCTAGTCCAAGTGGGGGGATGGTGTGGAGATAATGGGACGTTTCGGCCTGGCTTCCAGAATCAACTTGGGAAGATGATGAAAGAAAGACTACCAGAATGCAACATAGTCGTGAGCCCGAACATTGAGTCTAGAGTGAAGCTGCTAAAAAAAAGTACATGGCGATAGCTAAGATGATGGGACCAGCATGCAGTGGATTTGGTTGGAACGAGGAGAGGAAGTGCATAGAGGCAAAAAAGGAGATTTTTGATTTGTGGGTGGAGGTAAGTGAACAACGATCATAATTATGATATACATCTGATACACATTTCTACCTTCTGTCCGCTAACAAAACATTTATCTTCCACCTGTAGGGACATCCACAGGCCAAAGGCCTCCGTAACCGACCATTCTCGTGGTTCAATAAGTTGGCGCTCGTTTTCGGGAAGGACAGCTCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCGGAGCCGATAGCCTATCTTGATGAAGACATGAACGTGGACTACGAGGATTGCTACGTCCCTAGTCCCCCAATTATTGATCCCACCCTTGGAGACAAATTCTGTGGGACACCGACTGGTAGGACGAGTAGTGCAGGACCTTCTAAGGTAGTATATAAGAGACGGTTGTCCATTGGGAACGTGGCGGAGGTACTGGAGAGTGGATTCCAAATGACTGCACAACATATCGAGAAGATTGCGCTCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGTTGAAAGGAGTTGTATGCGGAGCTACAGTCCATTCCTGGAGTGTCTATAGAGGACGGCTTGGTGGTCGCACGGGCCCTACTATCAGATGAGAAGATGATGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTATTGTATGGAGATCCTCGGCAGGGAACCGAGACAGCCCCCGCAGCCATGA ATGCCCGGTGTTTACACGATGTGGTACGAATGTTCCAGCCAAGTACACGATTTTAGTGGCACCGTATACCAATCATACGAGAGGTGGGACGTCGCAGAAGTAGCTTATACTGCTTACACCATGGAAGTGGACAGTCATTCCGCTCATCATGGAGACCTTCACCTTCACACTAGCTCTCCTAACCGTGACCTAGATAGGAATGTAGTTAATAGGACTGTTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGATTGTCCGTAGAGGCTATCAAATGGATGCCCAAGATAATGAAATTCAAGAATTGATAGCAATTCTTACTGTCATTTGTGCGACGCAGTGCTGGAAGGTTGCCCAGTCAATTTCGGGGTCAAAACAACCGGTTAGGTGCGAAGAAGACTCGTCAACAACGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGTCGCATTTCAAGTTTGCCTTCCCAGAAATGCGGTCGCAATTCTGGGGAATTCCAGCTTCTCCTCTACTGCAAGCCACTAACTACGTCGATGTGGAGGAGATGGTTGCAATGTTCCTCCACATCGTTGCACGGGACGTTAAGAATCGTGTGATCCGTCGTCAATTCGTGTGTTCGAGAGAGACCGTATCCTGGCACTTCAATGTCGTACTGGATGCGGTACTCCGATTTCACCCAGTCCTATTGAAAGCACCTGAACCAGTTACCAATGCGTGTACGGACGATAGGTGGAAGTGGTTTGAGATGGTCGCGCCTGCCTCAGCTTCCAAGAAAGAGAAACACGTCTGGACACCAGACGAAGATGCAATGCTAGTGCAGTGCCTAGTTCACCTAGTCCAAGTGGGGGGATGGTGTGGAGATAATGGGACGTTTCGGCCTGGCTTCCAGAATCAACTTGGGAAGATGATGAAAGAAAGACTACCAGAATGCAACATAGTCGGACATCCACAGGCCAAAGGCCTCCGTAACCGACCATTCTCGTGGTTCAATAAGTTGGCGCTCGTTTTCGGGAAGGACAGCTCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCGGAGCCGATAGCCTATCTTGATGAAGACATGAACGTGGACTACGAGGATTGCTACGTCCCTAGTCCCCCAATTATTGATCCCACCCTTGGAGACAAATTCTGTGGGACACCGACTGGTAGGACGAGTAGTGCAGGACCTTCTAAGGTAGTATATAAGAGACGGTTGTCCATTGGGAACGTGGCGGAGCTACAGTCCATTCCTGGAGTGTCTATAGAGGACGGCTTGGTGGTCGCACGGGCCCTACTATCAGATGAGAAGATGATGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTATTGTATGGAGATCCTCGGCAGGGAACCGAGACAGCCCCCGCAGCCATGA ATGCCCGGTGTTTACACGATGTGGTACGAATGTTCCAGCCAAGTACACGATTTTAGTGGCACCGTATACCAATCATACGAGAGGTGGGACGTCGCAGAAGTAGCTTATACTGCTTACACCATGGAAGTGGACAGTCATTCCGCTCATCATGGAGACCTTCACCTTCACACTAGCTCTCCTAACCGTGACCTAGATAGGAATGTAGTTAATAGGACTGTTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGATTGTCCGTAGAGGCTATCAAATGGATGCCCAAGATAATGAAATTCAAGAATTGATAGCAATTCTTACTGTCATTTGTGCGACGCAGTGCTGGAAGGTTGCCCAGTCAATTTCGGGGTCAAAACAACCGGTTAGGTGCGAAGAAGACTCGTCAACAACGACCCGCGCACGACTCGGAACGGCCTCTGTTTTTCCAGAAATGCGGTCGCATTTCAAGTTTGCCTTCCCAGAAATGCGGTCGCAATTCTGGGGAATTCCAGCTTCTCCTCTACTGCAAGCCACTAACTACGTCGATGTGGAGGAGATGGTTGCAATGTTCCTCCACATCGTTGCACGGGACGTTAAGAATCGTGTGATCCGTCGTCAATTCGTGTGTTCGAGAGAGACCGTATCCTGGCACTTCAATGTCGTACTGGATGCGGTACTCCGATTTCACCCAGTCCTATTGAAAGCACCTGAACCAGTTACCAATGCGTGTACGGACGATAGGTGGAAGTGGTTTGAGATGGTCGCGCCTGCCTCAGCTTCCAAGAAAGAGAAACACGTCTGGACACCAGACGAAGATGCAATGCTAGTGCAGTGCCTAGTTCACCTAGTCCAAGTGGGGGGATGGTGTGGAGATAATGGGACGTTTCGGCCTGGCTTCCAGAATCAACTTGGGAAGATGATGAAAGAAAGACTACCAGAATGCAACATAGTCGGACATCCACAGGCCAAAGGCCTCCGTAACCGACCATTCTCGTGGTTCAATAAGTTGGCGCTCGTTTTCGGGAAGGACAGCTCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCGGAGCCGATAGCCTATCTTGATGAAGACATGAACGTGGACTACGAGGATTGCTACGTCCCTAGTCCCCCAATTATTGATCCCACCCTTGGAGACAAATTCTGTGGGACACCGACTGGTAGGACGAGTAGTGCAGGACCTTCTAAGGTAGTATATAAGAGACGGTTGTCCATTGGGAACGTGGCGGAGCTACAGTCCATTCCTGGAGTGTCTATAGAGGACGGCTTGGTGGTCGCACGGGCCCTACTATCAGATGAGAAGATGATGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTATTGTATGGAGATCCTCGGCAGGGAACCGAGACAGCCCCCGCAGCCATGA MPGVYTMWYECSSQVHDFSGTVYQSYERWDVAEVAYTAYTMEVDSHSAHHGDLHLHTSSPNRDLDRNVVNRTVSTCSGAYHVLLFIVGIVRRGYQMDAQDNEIQELIAILTVICATQCWKVAQSISGSKQPVRCEEDSSTTTRARLGTASVFPEMRSHFKFAFPEMRSQFWGIPASPLLQATNYVDVEEMVAMFLHIVARDVKNRVIRRQFVCSRETVSWHFNVVLDAVLRFHPVLLKAPEPVTNACTDDRWKWFEMVAPASASKKEKHVWTPDEDAMLVQCLVHLVQVGGWCGDNGTFRPGFQNQLGKMMKERLPECNIVGHPQAKGLRNRPFSWFNKLALVFGKDSSRGVRARTPIEITPEPEPIAYLDEDMNVDYEDCYVPSPPIIDPTLGDKFCGTPTGRTSSAGPSKVVYKRRLSIGNVAELQSIPGVSIEDGLVVARALLSDEKMMTHFMDFPPEWKFDYCMEILGREPRQPPQP Homology
BLAST of Spg006640 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 218.8 bits (556), Expect = 1.0e-52 Identity = 134/378 (35.45%), Postives = 191/378 (50.53%), Query Frame = 0
BLAST of Spg006640 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 1.8e-52 Identity = 126/334 (37.72%), Postives = 174/334 (52.10%), Query Frame = 0
BLAST of Spg006640 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 215.7 bits (548), Expect = 8.8e-52 Identity = 125/334 (37.43%), Postives = 173/334 (51.80%), Query Frame = 0
BLAST of Spg006640 vs. NCBI nr
Match: KAA0033168.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK15357.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 180.3 bits (456), Expect = 4.1e-41 Identity = 96/210 (45.71%), Postives = 123/210 (58.57%), Query Frame = 0
BLAST of Spg006640 vs. NCBI nr
Match: TYK02222.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 172.9 bits (437), Expect = 6.5e-39 Identity = 118/367 (32.15%), Postives = 172/367 (46.87%), Query Frame = 0
BLAST of Spg006640 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 5.0e-53 Identity = 134/378 (35.45%), Postives = 191/378 (50.53%), Query Frame = 0
BLAST of Spg006640 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 8.5e-53 Identity = 126/334 (37.72%), Postives = 174/334 (52.10%), Query Frame = 0
BLAST of Spg006640 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.2e-52 Identity = 125/334 (37.43%), Postives = 173/334 (51.80%), Query Frame = 0
BLAST of Spg006640 vs. ExPASy TrEMBL
Match: A0A5D3CTT8 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5393G00050 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.0e-41 Identity = 96/210 (45.71%), Postives = 123/210 (58.57%), Query Frame = 0
BLAST of Spg006640 vs. ExPASy TrEMBL
Match: A0A5D3BTU3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00110 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.2e-39 Identity = 118/367 (32.15%), Postives = 172/367 (46.87%), Query Frame = 0
BLAST of Spg006640 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05 Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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